FFCP PHASE1:Hg19::chr6:152793125..152793140,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000481502_5end | |||
|cluster_id=chr6:152793125..152793140,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_25_at_SYNE1_5end | |||
|id=chr6:152793125..152793140,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-12;82!UBERON:0006222;5.97e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.97e-09;1!DOID:4549;5.97e-09;1!DOID:5861;5.97e-09;1!DOID:6496;5.97e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.72e-09,1;DOID:4549,6.72e-09,1;DOID:5861,6.72e-09,1;DOID:6496,6.72e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.18e-53!57;UBERON:0005068!4.18e-53!57;UBERON:0006241!4.18e-53!57;UBERON:0007135!4.18e-53!57;UBERON:0002616!5.80e-51!59;UBERON:0002780!4.19e-50!41;UBERON:0001890!4.19e-50!41;UBERON:0006240!4.19e-50!41;UBERON:0003080!1.01e-48!42;UBERON:0001893!2.39e-45!34;UBERON:0001869!4.16e-45!32;UBERON:0000955!4.65e-44!69;UBERON:0006238!4.65e-44!69;UBERON:0002791!4.08e-43!33;UBERON:0002020!6.61e-42!34;UBERON:0003528!6.61e-42!34;UBERON:0001017!7.86e-40!82;UBERON:0002619!4.08e-38!22;UBERON:0007023!5.62e-38!115;UBERON:0005743!1.73e-37!86;UBERON:0003075!9.22e-36!86;UBERON:0007284!9.22e-36!86;UBERON:0002346!1.39e-35!90;UBERON:0001950!2.67e-33!20;UBERON:0000956!4.68e-33!25;UBERON:0000203!4.68e-33!25;UBERON:0000073!6.29e-33!94;UBERON:0001016!6.29e-33!94;UBERON:0003056!5.50e-31!61;UBERON:0000153!1.49e-25!129;UBERON:0007811!1.49e-25!129;UBERON:0000033!1.83e-24!123;UBERON:0000924!5.26e-17!173;UBERON:0006601!5.26e-17!173;UBERON:0004121!1.13e-16!169;UBERON:0000200!2.13e-16!6;UBERON:0002420!2.94e-14!9;UBERON:0007245!2.94e-14!9;UBERON:0010009!2.94e-14!9;UBERON:0010011!2.94e-14!9;UBERON:0000454!2.94e-14!9;UBERON:0000349!3.63e-14!5;UBERON:0000025!3.97e-13!194;UBERON:0000475!3.96e-12!365;UBERON:0001871!4.16e-12!7;UBERON:0004111!1.82e-10!241;UBERON:0002308!3.08e-10!9;UBERON:0000125!3.08e-10!9;UBERON:0009663!1.20e-09!7;UBERON:0004733!2.91e-09!12;UBERON:0002028!2.91e-09!12;UBERON:0007277!2.91e-09!12;UBERON:0002771!3.72e-09!3;UBERON:0001872!7.52e-09!5;UBERON:0000064!8.36e-09!219;UBERON:0004732!1.82e-08!13;UBERON:0002021!1.99e-08!5;UBERON:0000477!3.01e-08!286;UBERON:0000483!2.45e-07!309;UBERON:0003076!3.42e-07!15;UBERON:0003057!3.42e-07!15;UBERON:0000119!3.67e-07!312;UBERON:0000369!3.95e-07!4;UBERON:0002435!3.95e-07!4;UBERON:0000204!3.95e-07!4;UBERON:0010082!3.95e-07!4;UBERON:0002680!5.68e-07!9;UBERON:0001895!5.68e-07!9;UBERON:0010092!5.68e-07!9;UBERON:0001870!7.57e-07!2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002780,7.30e-70,41;UBERON:0001890,7.30e-70,41;UBERON:0003080,7.30e-70,41;UBERON:0006240,7.30e-70,41;UBERON:0001869,1.60e-64,32;UBERON:0001893,1.15e-60,34;UBERON:0000073,1.79e-59,53;UBERON:0002616,1.79e-59,53;UBERON:0002791,3.30e-57,32;UBERON:0001049,3.67e-56,56;UBERON:0005068,3.67e-56,56;UBERON:0006241,3.67e-56,56;UBERON:0007135,3.67e-56,56;UBERON:0003528,8.86e-54,34;UBERON:0002020,8.86e-54,34;UBERON:0000955,9.22e-50,68;UBERON:0006238,9.22e-50,68;UBERON:0002619,2.52e-46,22;UBERON:0003056,3.08e-46,61;UBERON:0001017,2.11e-45,81;UBERON:0000956,9.51e-41,25;UBERON:0000203,9.51e-41,25;UBERON:0001016,1.34e-40,89;UBERON:0000349,1.34e-38,5;UBERON:0003075,1.83e-37,82;UBERON:0007284,1.83e-37,82;UBERON:0002346,1.41e-35,86;UBERON:0001950,2.61e-35,20;UBERON:0007023,5.66e-32,114;UBERON:0000200,6.06e-32,6;UBERON:0002420,7.76e-31,9;UBERON:0007245,7.76e-31,9;UBERON:0010009,7.76e-31,9;UBERON:0010011,7.76e-31,9;UBERON:0000454,7.76e-31,9;UBERON:0010371,7.34e-29,104;UBERON:0001870,1.20e-24,3;UBERON:0010314,2.06e-24,132;UBERON:0004121,1.13e-19,171;UBERON:0000924,1.13e-19,171;UBERON:0006601,1.13e-19,171;UBERON:0000369,1.29e-18,4;UBERON:0002435,1.29e-18,4;UBERON:0000204,1.29e-18,4;UBERON:0010082,1.29e-18,4;UBERON:0009663,3.36e-18,7;UBERON:0001871,7.42e-18,6;UBERON:0002702,5.32e-17,2;UBERON:0001876,1.37e-16,2;UBERON:0000007,1.48e-16,2;UBERON:0001954,1.88e-16,2;UBERON:0003022,1.88e-16,2;UBERON:0002421,1.88e-16,2;UBERON:0002600,1.88e-16,2;UBERON:0002771,2.99e-16,2;UBERON:0011216,1.05e-15,223;UBERON:0000125,3.34e-14,9;UBERON:0002308,3.34e-14,9;UBERON:0000025,5.16e-14,192;UBERON:0005383,8.35e-12,3;UBERON:0005382,8.35e-12,3;UBERON:0004111,1.82e-10,240;UBERON:0001894,1.99e-10,7;UBERON:0006222,1.99e-10,7;UBERON:0001874,1.89e-09,1;UBERON:0001882,3.88e-09,1;UBERON:0005403,3.88e-09,1;UBERON:0003112,5.31e-09,1;UBERON:0011158,5.31e-09,1;UBERON:0003128,5.31e-09,1;UBERON:0001703,5.31e-09,1;UBERON:0002241,5.31e-09,1;UBERON:0004761,5.31e-09,1;UBERON:0009617,5.31e-09,1;UBERON:0002022,7.85e-09,1;UBERON:0007195,9.91e-09,1;UBERON:0003296,9.94e-09,4;UBERON:0010133,9.94e-09,4;UBERON:0007190,1.16e-08,1;UBERON:0000483,2.17e-07,306;UBERON:0000119,2.79e-07,309 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.473107245101804,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.54736358051564,0,0,0,0.19924798825107,0,0,0,0,0.622079175323615,0,0,0,0,0,1.11136990144637,0,1.94813006139888,0,0,0,0,0,0,0,0,0,0,0,5.90922549264499,3.05163472634166,0.331737779793674,0.295547618953547,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,1.235585773681,0,0,0,2.78567502205866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,1.22583065500418,0,0,0,0,0,1.21499113316049,0,0.236417121897595,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0.327872630709804,0,2.65820453990096,1.46431517882356,2.6290095448365,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,1.79841830270087,0,0.319267718114302,1.43581454968528,0.504143392443436,0.207471757392654,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,1.01306376927592,2.34323429584154,0.826747186004736,0.443910671357348,0,0,0,0,0,0,0,1.82089681270989,1.59363533945908,0,0,0,0.543757863814654,0.920818829879887,0,0,0,2.98519620840404,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0.827463966895162,0.426467963801962,0,0,0.0620747142958579,0,0,0,0.435433495793923,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p25@SYNE1 | |||
}} |
Latest revision as of 06:48, 16 September 2015
Short description: | p25@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SYNE1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000481502_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.72e-09 | 1 |
extraosseous chondrosarcoma | 6.72e-09 | 1 |
myxoid chondrosarcoma | 6.72e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 6.72e-09 | 1 |