FFCP PHASE1:Hg19::chr17:53344980..53345011,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:53344980..53345011,+
|short_description=p3@HLF
|description=CAGE_peak_3_at_HLF_5end
|association_with_transcript=4bp_to_uc002iuh.2,uc010wni.1_5end
|Entre...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3131 | |EntrezGene=3131 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4977 | |HGNC=4977 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_uc002iuh.2,uc010wni.1_5end | |||
|cluster_id=chr17:53344980..53345011,+ | |||
|coexpression_cluster_id=C703 | |||
|description=CAGE_peak_3_at_HLF_5end | |||
|id=chr17:53344980..53345011,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.66e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.62e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.93e-16;82!UBERON:0004161;1.14e-07;11!UBERON:0002532;1.95e-07;206!UBERON:0010316;1.95e-07;206!UBERON:0006241;2.00e-07;3!UBERON:0003057;2.00e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-98!115;UBERON:0001049!2.81e-44!57;UBERON:0005068!2.81e-44!57;UBERON:0006241!2.81e-44!57;UBERON:0007135!2.81e-44!57;UBERON:0002616!1.16e-35!59;UBERON:0001017!1.41e-34!82;UBERON:0003075!3.02e-34!86;UBERON:0007284!3.02e-34!86;UBERON:0005743!4.16e-34!86;UBERON:0003080!5.42e-34!42;UBERON:0000955!1.72e-33!69;UBERON:0006238!1.72e-33!69;UBERON:0002780!1.01e-32!41;UBERON:0001890!1.01e-32!41;UBERON:0006240!1.01e-32!41;UBERON:0002346!5.07e-32!90;UBERON:0000073!4.31e-31!94;UBERON:0001016!4.31e-31!94;UBERON:0001893!8.28e-26!34;UBERON:0002020!4.52e-25!34;UBERON:0003528!4.52e-25!34;UBERON:0000153!1.67e-24!129;UBERON:0007811!1.67e-24!129;UBERON:0002791!1.91e-24!33;UBERON:0000033!2.85e-24!123;UBERON:0001869!3.90e-23!32;UBERON:0004121!3.59e-22!169;UBERON:0003056!6.52e-22!61;UBERON:0000924!3.12e-21!173;UBERON:0006601!3.12e-21!173;UBERON:0004111!1.18e-20!241;UBERON:0002619!5.53e-20!22;UBERON:0000477!7.58e-18!286;UBERON:0001950!9.44e-18!20;UBERON:0000956!5.13e-17!25;UBERON:0000203!5.13e-17!25;UBERON:0000025!9.77e-17!194;UBERON:0000062!1.49e-14!511;UBERON:0000481!1.09e-12!347;UBERON:0000475!1.23e-12!365;UBERON:0002298!2.66e-12!8;UBERON:0003076!3.63e-11!15;UBERON:0003057!3.63e-11!15;UBERON:0002420!8.38e-10!9;UBERON:0007245!8.38e-10!9;UBERON:0010009!8.38e-10!9;UBERON:0010011!8.38e-10!9;UBERON:0000454!8.38e-10!9;UBERON:0002308!1.06e-09!9;UBERON:0000125!1.06e-09!9;UBERON:0000483!2.48e-09!309;UBERON:0000119!4.55e-09!312;UBERON:0004732!7.92e-09!13;UBERON:0000922!1.11e-08!612;UBERON:0001894!2.03e-08!7;UBERON:0006222!2.03e-08!7;UBERON:0000467!2.25e-08!625;UBERON:0001871!2.35e-08!7;UBERON:0000480!2.58e-08!626;UBERON:0000923!3.29e-08!604;UBERON:0005291!3.29e-08!604;UBERON:0006598!3.29e-08!604;UBERON:0002532!3.29e-08!604;UBERON:0000468!3.43e-08!659;UBERON:0002050!3.78e-08!605;UBERON:0005423!3.78e-08!605;UBERON:0002530!5.87e-08!59;UBERON:0002365!7.52e-08!31;UBERON:0002330!7.52e-08!31;UBERON:0009663!1.13e-07!7;UBERON:0005174!1.36e-07!5;UBERON:0001137!1.36e-07!5;UBERON:0000349!1.36e-07!5;UBERON:0004733!1.73e-07!12;UBERON:0002028!1.73e-07!12;UBERON:0007277!1.73e-07!12;UBERON:0003296!3.12e-07!4;UBERON:0010133!3.12e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.24e-21;114!UBERON:0000073;2.31e-20;53!UBERON:0002616;2.31e-20;53!UBERON:0002780;1.70e-19;41!UBERON:0001890;1.70e-19;41!UBERON:0001893;1.39e-14;34!UBERON:0002619;2.57e-13;22!UBERON:0001869;4.36e-13;32!UBERON:0002791;5.28e-13;32!UBERON:0001017;8.13e-13;75!UBERON:0001950;1.01e-12;20!UBERON:0003528;1.02e-12;34!UBERON:0002020;1.02e-12;34!UBERON:0000955;1.21e-12;68!UBERON:0001016;1.36e-11;83!UBERON:0000956;2.05e-11;25!UBERON:0000203;2.05e-11;25!UBERON:0001894;3.23e-11;7!UBERON:0004732;7.40e-10;13!UBERON:0002298;1.51e-09;6!UBERON:0003296;2.18e-09;4!UBERON:0010133;2.18e-09;4!UBERON:0002365;1.39e-08;31!UBERON:0002330;1.39e-08;31!UBERON:0004733;3.95e-08;12!UBERON:0002028;3.95e-08;12!UBERON:0001896;1.00e-07;3!UBERON:0005290;1.00e-07;3!UBERON:0002240;2.00e-07;3!UBERON:0005174;2.00e-07;3!UBERON:0001137;2.00e-07;3!UBERON:0002107;2.46e-07;19!UBERON:0006925;2.46e-07;19!UBERON:0002021;3.15e-07;5!UBERON:0011216;3.66e-07;132!UBERON:0002368;3.66e-07;33!UBERON:0006947;4.45e-07;3!UBERON:0004054;4.45e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.21e-83,114;UBERON:0001049,2.12e-38,56;UBERON:0005068,2.12e-38,56;UBERON:0006241,2.12e-38,56;UBERON:0007135,2.12e-38,56;UBERON:0000073,1.80e-33,53;UBERON:0002616,1.80e-33,53;UBERON:0001017,2.26e-32,81;UBERON:0003075,2.99e-30,82;UBERON:0007284,2.99e-30,82;UBERON:0001016,6.00e-30,89;UBERON:0000955,2.13e-29,68;UBERON:0006238,2.13e-29,68;UBERON:0002346,2.43e-28,86;UBERON:0002780,1.85e-26,41;UBERON:0001890,1.85e-26,41;UBERON:0003080,1.85e-26,41;UBERON:0006240,1.85e-26,41;UBERON:0011216,5.73e-26,223;UBERON:0010371,6.57e-23,104;UBERON:0010314,3.54e-19,132;UBERON:0003056,4.74e-19,61;UBERON:0004121,9.28e-19,171;UBERON:0000924,9.28e-19,171;UBERON:0006601,9.28e-19,171;UBERON:0001893,4.65e-18,34;UBERON:0004111,5.19e-18,240;UBERON:0000025,9.55e-16,192;UBERON:0003528,1.14e-15,34;UBERON:0002020,1.14e-15,34;UBERON:0001869,3.94e-15,32;UBERON:0002791,4.64e-15,32;UBERON:0002619,2.53e-13,22;UBERON:0003076,5.57e-13,15;UBERON:0003057,5.57e-13,15;UBERON:0001950,1.12e-12,20;UBERON:0000956,2.03e-11,25;UBERON:0000203,2.03e-11,25;UBERON:0001894,3.75e-11,7;UBERON:0006222,3.75e-11,7;UBERON:0004732,6.74e-10,13;UBERON:0002298,1.77e-09,6;UBERON:0003296,2.34e-09,4;UBERON:0010133,2.34e-09,4;UBERON:0002365,7.55e-09,31;UBERON:0002330,7.55e-09,31;UBERON:0002530,1.69e-08,59;UBERON:0004733,3.63e-08,12;UBERON:0002028,3.63e-08,12;UBERON:0007277,3.63e-08,12;UBERON:0000483,5.64e-08,306;UBERON:0000923,7.12e-08,560;UBERON:0010316,7.12e-08,560;UBERON:0005291,7.12e-08,560;UBERON:0006598,7.12e-08,560;UBERON:0010317,7.12e-08,560;UBERON:0002532,7.12e-08,560;UBERON:0000119,8.91e-08,309;UBERON:0001896,9.94e-08,3;UBERON:0005290,9.94e-08,3;UBERON:0010096,9.94e-08,3;UBERON:0002050,1.10e-07,564;UBERON:0002240,1.83e-07,3;UBERON:0005174,1.83e-07,3;UBERON:0001137,1.83e-07,3;UBERON:0002368,2.11e-07,35;UBERON:0002107,2.33e-07,19;UBERON:0006925,2.33e-07,19;UBERON:0008836,2.33e-07,19;UBERON:0002021,3.55e-07,5;UBERON:0009854,3.93e-07,23;UBERON:0006947,4.50e-07,3;UBERON:0004054,4.50e-07,3;UBERON:0000922,6.23e-07,592;UBERON:0005423,6.61e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,2.88153966094968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.0967118394225,7.86261773342101,30.721075147433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0103226357935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,37.092657506051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,1.79323189425963,1.38141957765574,0,0,0,0,0,0,0,3.35387579165574,0,0,9.69332746095218,3.8034920246359,1.99613798001194,0,1.39935999993913,2.17499872630438,0,0,0,0,0,0,1.77148277162768,0.964771509003264,0,1.99042667876204,1.47773809476774,5.26524953169534,0,0,10.8499864490354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,3.36138745112689,3.05515072466813,0,0,0,5.18988723951213,0,4.2167600230561,0,0,0,2.76209081994573,0,0.61214552326098,29.2553863679899,0,0,0,0,0,0,0,0.554698692052555,0,0,0,2.09672001890436,0,0,0,0,7.95309935205039,0,3.84167259326905,0,0,5.44472845220557,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.0535806833799,0,0,0,1.39641200636127,2.52076466412852,0.717873024576814,0.399358000997982,0.429226048136571,1.11585728720936,0.0671834724867263,0,0,36.7129629551662,37.3343838466684,43.9471105929285,0,0,0.795229689809303,1.90684768556206,0,0,0,0,0,5.83195743917037,0,0.315222829196793,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,36.1984017184864,3.97520666736664,0.258565912723101,1.05786081394152,0,0,1.17466153824464,0.157204305099666,0.828478110694391,0,0,0,0,1.63205341010842,2.506898940227,0.612691153526923,1.31149052283922,0,0,0.244052529803926,2.8793914062495,2.86704597845036,4.21530395840039,7.20318274120048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84485948377782,0,1.59633859057151,5.12790910601888,1.00828678488687,4.84100767249525,4.35984243205998,8.56616521554926,0,0,0,0,0,0,0,5.11430232774949,0,0,0,0,0,4.52501816943244,0,1.03343398250592,4.05861185241004,0.546974809018219,6.030835435429,4.96211178389294,0,0,6.42842203053944,2.01770233331294,3.64179362541979,2.73194629621557,0,0,0,7.27276142852099,4.93295801721368,0,0.222462803784138,4.08164082822673,0,0,0,0,0,13.6520199377414,0,0,0,0,0.207216164163037,0.51215543128185,0,4.73250094702305,0,0,2.54032230114557,0,0,0,0,0,0,1.29485767437579,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,0.540219106755613,0,0,1.96118657403124,0,4.90771167787363,2.67341760294377,3.3812458206672,0,0.0939839179798536,0,0,0,0,0,1.46067277649303,6.88093925106811,3.29681041248338,0,5.77927666622775,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,3.94049230734845,0.535928260312357,0,2.1720929130998,1.27940389140589,0.476128862927481,0,0,0,0.636471582781649,0,1.08858373948481,1.02669990325584,0.942928742204225,1.43444410785353,0.99798106963804,0,0,0,0,0,4.15620910221746,0,1.99727032255654,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,2.88153966094968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.0967118394225,7.86261773342101,30.721075147433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.0103226357935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,37.092657506051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,0,0,0.994147647766298,0.984685914873589,0,0,0,1.79323189425963,1.38141957765574,0,0,0,0,0,0,0,3.35387579165574,0,0,9.69332746095218,3.8034920246359,1.99613798001194,0,1.39935999993913,2.17499872630438,0,0,0,0,0,0,1.77148277162768,0.964771509003264,0,1.99042667876204,1.47773809476774,5.26524953169534,0,0,10.8499864490354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,3.36138745112689,3.05515072466813,0,0,0,5.18988723951213,0,4.2167600230561,0,0,0,2.76209081994573,0,0.61214552326098,29.2553863679899,0,0,0,0,0,0,0,0.554698692052555,0,0,0,2.09672001890436,0,0,0,0,7.95309935205039,0,3.84167259326905,0,0,5.44472845220557,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,2.0535806833799,0,0,0,1.39641200636127,2.52076466412852,0.717873024576814,0.399358000997982,0.429226048136571,1.11585728720936,0.0671834724867263,0,0,36.7129629551662,37.3343838466684,43.9471105929285,0,0,0.795229689809303,1.90684768556206,0,0,0,0,0,5.83195743917037,0,0.315222829196793,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,36.1984017184864,3.97520666736664,0.258565912723101,1.05786081394152,0,0,1.17466153824464,0.157204305099666,0.828478110694391,0,0,0,0,1.63205341010842,2.506898940227,0.612691153526923,1.31149052283922,0,0,0.244052529803926,2.8793914062495,2.86704597845036,4.21530395840039,7.20318274120048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.84485948377782,0,1.59633859057151,5.12790910601888,1.00828678488687,4.84100767249525,4.35984243205998,8.56616521554926,0,0,0,0,0,0,0,5.11430232774949,0,0,0,0,0,4.52501816943244,0,1.03343398250592,4.05861185241004,0.546974809018219,6.030835435429,4.96211178389294,0,0,6.42842203053944,2.01770233331294,3.64179362541979,2.73194629621557,0,0,0,7.27276142852099,4.93295801721368,0,0.222462803784138,4.08164082822673,0,0,0,0,0,13.6520199377414,0,0,0,0,0.207216164163037,0.51215543128185,0,4.73250094702305,0,0,2.54032230114557,0,0,0,0,0,0,1.29485767437579,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,0.540219106755613,0,0,1.96118657403124,0,4.90771167787363,2.67341760294377,3.3812458206672,0,0.0939839179798536,0,0,0,0,0,1.46067277649303,6.88093925106811,3.29681041248338,0,5.77927666622775,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,3.94049230734845,0.535928260312357,0,2.1720929130998,1.27940389140589,0.476128862927481,0,0,0,0.636471582781649,0,1.08858373948481,1.02669990325584,0.942928742204225,1.43444410785353,0.99798106963804,0,0,0,0,0,4.15620910221746,0,1.99727032255654,1.00636896795513,0 | ||
|short_description=p3@HLF | |||
}} | }} |
Latest revision as of 06:57, 16 September 2015
Short description: | p3@HLF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HLF_5end |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | 4bp_to_uc002iuh.2, uc010wni.1_5end |
EntrezGene: | HLF |
HGNC: | 4977 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.62e-07 | 12 |