FFCP PHASE1:Hg19::chr10:111765798..111765847,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=120 | |EntrezGene=120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=245 | |HGNC=245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=19bp_to_uc001kyu.2_5end | |association_with_transcript=19bp_to_uc001kyu.2_5end | ||
|cluster_id=chr10:111765798..111765847,+ | |||
|coexpression_cluster_id=C2035 | |||
|description=CAGE_peak_4_at_ADD3_5end | |description=CAGE_peak_4_at_ADD3_5end | ||
|id=chr10:111765798..111765847,+ | |id=chr10:111765798..111765847,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.54e-23!180;CL:0000057!3.20e-14!75;CL:0000680!1.31e-10!57;CL:0000056!1.31e-10!57;CL:0000355!1.31e-10!57;CL:0000187!6.75e-10!54;CL:0000183!2.07e-09!59;CL:0000393!8.26e-09!60;CL:0000211!8.26e-09!60;CL:0000192!3.19e-07!42;CL:0000514!3.19e-07!42;CL:0000359!3.57e-07!32 | |ontology_enrichment_celltype=CL:0000055!5.54e-23!180;CL:0000057!3.20e-14!75;CL:0000680!1.31e-10!57;CL:0000056!1.31e-10!57;CL:0000355!1.31e-10!57;CL:0000187!6.75e-10!54;CL:0000183!2.07e-09!59;CL:0000393!8.26e-09!60;CL:0000211!8.26e-09!60;CL:0000192!3.19e-07!42;CL:0000514!3.19e-07!42;CL:0000359!3.57e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002494;4.62e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.74e-13,76;CL:0000680,2.21e-10,58;CL:0000056,2.21e-10,58;CL:0000355,2.21e-10,58;CL:0000187,1.29e-09,55;CL:0000393,1.41e-07,61;CL:0000211,1.41e-07,61;CL:0002494,5.45e-07,16;CL:0000192,9.28e-07,43;CL:0000514,9.28e-07,43;CL:0000359,9.58e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.10e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.00e-26!57;UBERON:0005068!2.00e-26!57;UBERON:0006241!2.00e-26!57;UBERON:0007135!2.00e-26!57;UBERON:0002616!1.24e-25!59;UBERON:0001017!3.34e-24!82;UBERON:0000955!6.52e-24!69;UBERON:0006238!6.52e-24!69;UBERON:0000073!7.18e-23!94;UBERON:0001016!7.18e-23!94;UBERON:0005743!8.87e-23!86;UBERON:0007023!1.39e-22!115;UBERON:0002780!1.14e-21!41;UBERON:0001890!1.14e-21!41;UBERON:0006240!1.14e-21!41;UBERON:0000475!2.15e-21!365;UBERON:0003080!2.98e-21!42;UBERON:0003075!1.39e-20!86;UBERON:0007284!1.39e-20!86;UBERON:0002346!1.19e-19!90;UBERON:0002020!4.94e-18!34;UBERON:0003528!4.94e-18!34;UBERON:0001893!5.19e-18!34;UBERON:0000033!2.01e-17!123;UBERON:0002791!2.12e-17!33;UBERON:0000153!5.71e-17!129;UBERON:0007811!5.71e-17!129;UBERON:0001869!7.42e-17!32;UBERON:0000481!3.92e-16!347;UBERON:0000119!4.97e-16!312;UBERON:0000025!7.28e-16!194;UBERON:0004121!9.43e-16!169;UBERON:0003056!2.01e-15!61;UBERON:0000483!2.13e-15!309;UBERON:0000924!2.22e-15!173;UBERON:0006601!2.22e-15!173;UBERON:0002619!6.12e-15!22;UBERON:0000477!8.60e-14!286;UBERON:0004111!1.26e-13!241;UBERON:0001950!1.58e-13!20;UBERON:0000956!1.42e-12!25;UBERON:0000203!1.42e-12!25;UBERON:0000468!1.67e-12!659;UBERON:0002385!7.15e-12!63;UBERON:0001015!7.15e-12!63;UBERON:0000383!7.15e-12!63;UBERON:0001134!2.15e-11!61;UBERON:0002036!2.15e-11!61;UBERON:0003082!2.15e-11!61;UBERON:0000914!6.62e-11!83;UBERON:0002329!6.62e-11!83;UBERON:0003077!6.62e-11!83;UBERON:0003059!6.62e-11!83;UBERON:0007282!6.62e-11!83;UBERON:0009618!6.62e-11!83;UBERON:0007285!6.62e-11!83;UBERON:0000467!3.03e-10!625;UBERON:0004290!3.54e-10!70;UBERON:0000480!4.75e-10!626;UBERON:0000062!1.96e-08!511;UBERON:0000486!8.15e-08!82;UBERON:0000922!1.83e-07!612;UBERON:0000948!2.70e-07!24;UBERON:0005498!2.70e-07!24;UBERON:0004140!2.70e-07!24;UBERON:0009881!2.70e-07!24;UBERON:0004141!2.70e-07!24;UBERON:0003084!2.70e-07!24;UBERON:0007005!2.70e-07!24;UBERON:0004139!2.70e-07!24;UBERON:0004291!2.70e-07!24;UBERON:0002420!3.11e-07!9;UBERON:0007245!3.11e-07!9;UBERON:0010009!3.11e-07!9;UBERON:0010011!3.11e-07!9;UBERON:0000454!3.11e-07!9;UBERON:0007100!3.59e-07!27;UBERON:0002308!4.79e-07!9;UBERON:0000125!4.79e-07!9;UBERON:0002050!5.90e-07!605;UBERON:0005423!5.90e-07!605;UBERON:0000923!9.80e-07!604;UBERON:0005291!9.80e-07!604;UBERON:0006598!9.80e-07!604;UBERON:0002532!9.80e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.23e-17;41!UBERON:0001890;7.23e-17;41!UBERON:0002619;2.18e-16;22!UBERON:0001893;3.36e-16;34!UBERON:0003528;3.81e-16;34!UBERON:0002020;3.81e-16;34!UBERON:0001869;6.12e-16;32!UBERON:0002791;6.89e-16;32!UBERON:0000073;4.77e-15;53!UBERON:0002616;4.77e-15;53!UBERON:0001950;7.88e-15;20!UBERON:0000956;4.65e-13;25!UBERON:0000203;4.65e-13;25!UBERON:0001017;7.61e-13;75!UBERON:0000955;6.27e-11;68!UBERON:0001016;2.20e-10;83!UBERON:0002420;7.91e-08;9!UBERON:0007245;7.91e-08;9!UBERON:0010009;7.91e-08;9!UBERON:0010011;7.91e-08;9!UBERON:0000454;7.91e-08;9!UBERON:0002385;8.07e-08;31!UBERON:0001015;8.07e-08;31!UBERON:0000383;8.07e-08;31!UBERON:0000125;1.27e-07;9!UBERON:0002308;1.27e-07;9!UBERON:0011216;1.54e-07;132!UBERON:0000948;5.78e-07;22!UBERON:0007023;9.09e-07;114 | |||
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| ||
|short_description=p4@ADD3 | |short_description=p4@ADD3 | ||
}} | }} |
Latest revision as of 07:46, 16 September 2015
Short description: | p4@ADD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADD3_5end |
Coexpression cluster: | C2035_hippocampus_parietal_spinal_amygdala_middle_Fibroblast_medial |
Association with transcript: | 19bp_to_uc001kyu.2_5end |
EntrezGene: | ADD3 |
HGNC: | 245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.74e-13 | 76 |
muscle precursor cell | 2.21e-10 | 58 |
myoblast | 2.21e-10 | 58 |
multi-potent skeletal muscle stem cell | 2.21e-10 | 58 |
muscle cell | 1.29e-09 | 55 |
electrically responsive cell | 1.41e-07 | 61 |
electrically active cell | 1.41e-07 | 61 |
cardiocyte | 5.45e-07 | 16 |
smooth muscle cell | 9.28e-07 | 43 |
smooth muscle myoblast | 9.28e-07 | 43 |
vascular associated smooth muscle cell | 9.58e-07 | 32 |