FFCP PHASE1:Hg19::chr10:118764684..118764710,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57698 | |EntrezGene=57698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29319 | |HGNC=29319 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=165bp_to_ENST00000260777_5end | |association_with_transcript=165bp_to_ENST00000260777_5end | ||
|cluster_id=chr10:118764684..118764710,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_1_at_KIAA1598_5end | |description=CAGE_peak_1_at_KIAA1598_5end | ||
|id=chr10:118764684..118764710,- | |id=chr10:118764684..118764710,- | ||
|ontology_enrichment_celltype=CL:0002009!1.28e-16!65;CL:0002194!7.09e-16!63;CL:0000576!7.09e-16!63;CL:0000040!7.09e-16!63;CL:0000559!7.09e-16!63;CL:0000557!2.33e-13!71;CL:0000066!7.82e-13!254;CL:0000860!1.08e-12!45;CL:0002057!6.94e-12!42;CL:0000839!1.71e-11!70;CL:0000766!2.07e-09!76 | |ontology_enrichment_celltype=CL:0002009!1.28e-16!65;CL:0002194!7.09e-16!63;CL:0000576!7.09e-16!63;CL:0000040!7.09e-16!63;CL:0000559!7.09e-16!63;CL:0000557!2.33e-13!71;CL:0000066!7.82e-13!254;CL:0000860!1.08e-12!45;CL:0002057!6.94e-12!42;CL:0000839!1.71e-11!70;CL:0000766!2.07e-09!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.39e-11;33!CL:0002057;3.39e-11;33!CL:0000473;8.43e-11;39!CL:0000234;8.43e-11;39!CL:0000576;5.89e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.83e-16,61;CL:0002194,1.03e-15,59;CL:0000576,1.03e-15,59;CL:0000040,1.03e-15,59;CL:0000559,1.03e-15,59;CL:0000473,1.30e-13,48;CL:0000234,1.30e-13,48;CL:0000066,5.28e-13,253;CL:0000557,5.59e-13,67;CL:0000860,6.69e-12,42;CL:0002057,6.69e-12,42;CL:0000839,3.97e-11,66;CL:0000766,4.19e-09,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.29e-09;82!CL:0002057;8.43e-09;42 | |||
|ontology_enrichment_disease=DOID:305!8.74e-18!106;DOID:0050687!3.59e-16!143 | |ontology_enrichment_disease=DOID:305!8.74e-18!106;DOID:0050687!3.59e-16!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.26e-18,106;DOID:0050687,3.53e-16,143;DOID:162,6.28e-07,235;DOID:14566,8.29e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000062!6.25e-33!511;UBERON:0001049!5.77e-25!57;UBERON:0005068!5.77e-25!57;UBERON:0006241!5.77e-25!57;UBERON:0007135!5.77e-25!57;UBERON:0005743!3.28e-24!86;UBERON:0001017!4.80e-24!82;UBERON:0000467!1.56e-22!625;UBERON:0000468!2.59e-22!659;UBERON:0002780!2.60e-22!41;UBERON:0001890!2.60e-22!41;UBERON:0006240!2.60e-22!41;UBERON:0000480!2.86e-22!626;UBERON:0000073!3.56e-22!94;UBERON:0001016!3.56e-22!94;UBERON:0003080!5.85e-22!42;UBERON:0000955!1.81e-21!69;UBERON:0006238!1.81e-21!69;UBERON:0000922!5.62e-21!612;UBERON:0000923!2.27e-20!604;UBERON:0005291!2.27e-20!604;UBERON:0006598!2.27e-20!604;UBERON:0002532!2.27e-20!604;UBERON:0002050!2.43e-20!605;UBERON:0005423!2.43e-20!605;UBERON:0002616!5.38e-20!59;UBERON:0002346!6.20e-19!90;UBERON:0007023!5.49e-18!115;UBERON:0003075!6.01e-18!86;UBERON:0007284!6.01e-18!86;UBERON:0002020!7.75e-18!34;UBERON:0003528!7.75e-18!34;UBERON:0001893!8.86e-18!34;UBERON:0002791!3.19e-17!33;UBERON:0000924!3.88e-17!173;UBERON:0006601!3.88e-17!173;UBERON:0001869!1.84e-16!32;UBERON:0004121!3.25e-16!169;UBERON:0000033!8.90e-16!123;UBERON:0003056!7.85e-15!61;UBERON:0000153!2.13e-14!129;UBERON:0007811!2.13e-14!129;UBERON:0002619!3.55e-13!22;UBERON:0000956!1.30e-12!25;UBERON:0000203!1.30e-12!25;UBERON:0001950!5.14e-12!20;UBERON:0002371!1.90e-09!80;UBERON:0001474!2.61e-08!86;UBERON:0004111!2.63e-08!241;UBERON:0000025!4.35e-08!194;UBERON:0002405!1.74e-07!115;UBERON:0002308!8.83e-07!9;UBERON:0000125!8.83e-07!9 | |ontology_enrichment_uberon=UBERON:0000062!6.25e-33!511;UBERON:0001049!5.77e-25!57;UBERON:0005068!5.77e-25!57;UBERON:0006241!5.77e-25!57;UBERON:0007135!5.77e-25!57;UBERON:0005743!3.28e-24!86;UBERON:0001017!4.80e-24!82;UBERON:0000467!1.56e-22!625;UBERON:0000468!2.59e-22!659;UBERON:0002780!2.60e-22!41;UBERON:0001890!2.60e-22!41;UBERON:0006240!2.60e-22!41;UBERON:0000480!2.86e-22!626;UBERON:0000073!3.56e-22!94;UBERON:0001016!3.56e-22!94;UBERON:0003080!5.85e-22!42;UBERON:0000955!1.81e-21!69;UBERON:0006238!1.81e-21!69;UBERON:0000922!5.62e-21!612;UBERON:0000923!2.27e-20!604;UBERON:0005291!2.27e-20!604;UBERON:0006598!2.27e-20!604;UBERON:0002532!2.27e-20!604;UBERON:0002050!2.43e-20!605;UBERON:0005423!2.43e-20!605;UBERON:0002616!5.38e-20!59;UBERON:0002346!6.20e-19!90;UBERON:0007023!5.49e-18!115;UBERON:0003075!6.01e-18!86;UBERON:0007284!6.01e-18!86;UBERON:0002020!7.75e-18!34;UBERON:0003528!7.75e-18!34;UBERON:0001893!8.86e-18!34;UBERON:0002791!3.19e-17!33;UBERON:0000924!3.88e-17!173;UBERON:0006601!3.88e-17!173;UBERON:0001869!1.84e-16!32;UBERON:0004121!3.25e-16!169;UBERON:0000033!8.90e-16!123;UBERON:0003056!7.85e-15!61;UBERON:0000153!2.13e-14!129;UBERON:0007811!2.13e-14!129;UBERON:0002619!3.55e-13!22;UBERON:0000956!1.30e-12!25;UBERON:0000203!1.30e-12!25;UBERON:0001950!5.14e-12!20;UBERON:0002371!1.90e-09!80;UBERON:0001474!2.61e-08!86;UBERON:0004111!2.63e-08!241;UBERON:0000025!4.35e-08!194;UBERON:0002405!1.74e-07!115;UBERON:0002308!8.83e-07!9;UBERON:0000125!8.83e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.59e-16;41!UBERON:0001890;2.59e-16;41!UBERON:0001893;3.09e-15;34!UBERON:0003528;3.15e-15;34!UBERON:0002020;3.15e-15;34!UBERON:0002791;4.81e-15;32!UBERON:0001869;6.17e-15;32!UBERON:0000073;3.01e-14;53!UBERON:0002616;3.01e-14;53!UBERON:0002619;3.51e-13;22!UBERON:0000956;1.18e-12;25!UBERON:0000203;1.18e-12;25!UBERON:0001950;5.08e-12;20!UBERON:0001017;1.08e-10;75!UBERON:0000955;7.33e-10;68!UBERON:0001016;2.03e-09;83!UBERON:0000125;8.84e-07;9!UBERON:0002308;8.84e-07;9 | |||
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| ||
|short_description=p1@KIAA1598 | |short_description=p1@KIAA1598 | ||
}} | }} |
Latest revision as of 14:59, 16 September 2015
Short description: | p1@KIAA1598 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA1598_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 165bp_to_ENST00000260777_5end |
EntrezGene: | KIAA1598 |
HGNC: | 29319 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.83e-16 | 61 |
monopoietic cell | 1.03e-15 | 59 |
monocyte | 1.03e-15 | 59 |
monoblast | 1.03e-15 | 59 |
promonocyte | 1.03e-15 | 59 |
defensive cell | 1.30e-13 | 48 |
phagocyte | 1.30e-13 | 48 |
epithelial cell | 5.28e-13 | 253 |
granulocyte monocyte progenitor cell | 5.59e-13 | 67 |
classical monocyte | 6.69e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.69e-12 | 42 |
myeloid lineage restricted progenitor cell | 3.97e-11 | 66 |
myeloid leukocyte | 4.19e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.26e-18 | 106 |
cell type cancer | 3.53e-16 | 143 |
cancer | 6.28e-07 | 235 |
disease of cellular proliferation | 8.29e-07 | 239 |