FFCP PHASE1:Hg19::chr10:118897911..118897974,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11023 | |EntrezGene=11023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12660 | |HGNC=12660 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQQ9 | |UniProt=Q5SQQ9 | ||
|association_with_transcript=-99bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | |association_with_transcript=-99bp_to_ENST00000277905,ENST00000369206,NM_001112704,NM_199131,uc001ldb.1,uc009xyx.2_5end | ||
|cluster_id=chr10:118897911..118897974,- | |||
|description=CAGE_peak_1_at_VAX1_5end | |description=CAGE_peak_1_at_VAX1_5end | ||
|id=chr10:118897911..118897974,- | |id=chr10:118897911..118897974,- | ||
|ontology_enrichment_celltype=CL:0000047!1.48e-09!8;CL:0002319!4.11e-07!25;CL:0002605!5.63e-07!3 | |ontology_enrichment_celltype=CL:0000047!1.48e-09!8;CL:0002319!4.11e-07!25;CL:0002605!5.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.54e-10;25!CL:0000047;2.79e-10;2!CL:0000540;3.09e-08;6!CL:0000404;3.09e-08;6!CL:0002605;1.67e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.88e-15,8;CL:0002319,2.75e-10,25;CL:0000540,3.16e-08,6;CL:0000031,3.16e-08,6;CL:0000404,3.16e-08,6;CL:0002605,1.81e-07,3;CL:0000133,2.08e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.12e-11;2!UBERON:0006601;2.36e-08;82!CL:0000031;3.09e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.93e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.80e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.99e-48!82;UBERON:0000073!1.12e-47!94;UBERON:0001016!1.12e-47!94;UBERON:0005743!5.73e-47!86;UBERON:0001893!7.58e-46!34;UBERON:0001869!1.16e-45!32;UBERON:0002780!5.06e-45!41;UBERON:0001890!5.06e-45!41;UBERON:0006240!5.06e-45!41;UBERON:0002791!4.70e-44!33;UBERON:0003080!1.00e-43!42;UBERON:0001049!2.03e-40!57;UBERON:0005068!2.03e-40!57;UBERON:0006241!2.03e-40!57;UBERON:0007135!2.03e-40!57;UBERON:0002020!2.55e-39!34;UBERON:0003528!2.55e-39!34;UBERON:0000955!3.52e-37!69;UBERON:0006238!3.52e-37!69;UBERON:0002616!2.23e-36!59;UBERON:0002346!5.13e-36!90;UBERON:0003056!1.59e-34!61;UBERON:0000956!1.02e-32!25;UBERON:0000203!1.02e-32!25;UBERON:0003075!4.02e-32!86;UBERON:0007284!4.02e-32!86;UBERON:0000924!1.88e-30!173;UBERON:0006601!1.88e-30!173;UBERON:0002619!1.67e-27!22;UBERON:0004121!2.48e-27!169;UBERON:0001950!2.18e-24!20;UBERON:0000033!2.63e-22!123;UBERON:0000153!1.14e-20!129;UBERON:0007811!1.14e-20!129;UBERON:0007023!1.38e-19!115;UBERON:0002420!3.22e-14!9;UBERON:0007245!3.22e-14!9;UBERON:0010009!3.22e-14!9;UBERON:0010011!3.22e-14!9;UBERON:0000454!3.22e-14!9;UBERON:0000200!1.37e-11!6;UBERON:0001871!1.74e-11!7;UBERON:0009663!6.42e-11!7;UBERON:0000349!5.11e-10!5;UBERON:0000369!1.35e-09!4;UBERON:0002435!1.35e-09!4;UBERON:0000204!1.35e-09!4;UBERON:0010082!1.35e-09!4;UBERON:0000025!1.31e-08!194;UBERON:0002308!2.81e-08!9;UBERON:0000125!2.81e-08!9;UBERON:0005383!1.02e-07!3;UBERON:0005382!1.02e-07!3;UBERON:0001872!5.06e-07!5 | |ontology_enrichment_uberon=UBERON:0001017!7.99e-48!82;UBERON:0000073!1.12e-47!94;UBERON:0001016!1.12e-47!94;UBERON:0005743!5.73e-47!86;UBERON:0001893!7.58e-46!34;UBERON:0001869!1.16e-45!32;UBERON:0002780!5.06e-45!41;UBERON:0001890!5.06e-45!41;UBERON:0006240!5.06e-45!41;UBERON:0002791!4.70e-44!33;UBERON:0003080!1.00e-43!42;UBERON:0001049!2.03e-40!57;UBERON:0005068!2.03e-40!57;UBERON:0006241!2.03e-40!57;UBERON:0007135!2.03e-40!57;UBERON:0002020!2.55e-39!34;UBERON:0003528!2.55e-39!34;UBERON:0000955!3.52e-37!69;UBERON:0006238!3.52e-37!69;UBERON:0002616!2.23e-36!59;UBERON:0002346!5.13e-36!90;UBERON:0003056!1.59e-34!61;UBERON:0000956!1.02e-32!25;UBERON:0000203!1.02e-32!25;UBERON:0003075!4.02e-32!86;UBERON:0007284!4.02e-32!86;UBERON:0000924!1.88e-30!173;UBERON:0006601!1.88e-30!173;UBERON:0002619!1.67e-27!22;UBERON:0004121!2.48e-27!169;UBERON:0001950!2.18e-24!20;UBERON:0000033!2.63e-22!123;UBERON:0000153!1.14e-20!129;UBERON:0007811!1.14e-20!129;UBERON:0007023!1.38e-19!115;UBERON:0002420!3.22e-14!9;UBERON:0007245!3.22e-14!9;UBERON:0010009!3.22e-14!9;UBERON:0010011!3.22e-14!9;UBERON:0000454!3.22e-14!9;UBERON:0000200!1.37e-11!6;UBERON:0001871!1.74e-11!7;UBERON:0009663!6.42e-11!7;UBERON:0000349!5.11e-10!5;UBERON:0000369!1.35e-09!4;UBERON:0002435!1.35e-09!4;UBERON:0000204!1.35e-09!4;UBERON:0010082!1.35e-09!4;UBERON:0000025!1.31e-08!194;UBERON:0002308!2.81e-08!9;UBERON:0000125!2.81e-08!9;UBERON:0005383!1.02e-07!3;UBERON:0005382!1.02e-07!3;UBERON:0001872!5.06e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.48e-43;32!UBERON:0001893;8.81e-43;34!UBERON:0002791;1.97e-41;32!UBERON:0003528;1.15e-36;34!UBERON:0002020;1.15e-36;34!UBERON:0002780;1.88e-30;41!UBERON:0001890;1.88e-30;41!UBERON:0000956;5.14e-28;25!UBERON:0000203;5.14e-28;25!UBERON:0002619;1.31e-22;22!UBERON:0000073;3.35e-21;53!UBERON:0002616;3.35e-21;53!UBERON:0001950;1.42e-20;20!UBERON:0000369;5.00e-20;4!UBERON:0002435;5.00e-20;4!UBERON:0000204;5.00e-20;4!UBERON:0002420;3.97e-19;9!UBERON:0007245;3.97e-19;9!UBERON:0010009;3.97e-19;9!UBERON:0010011;3.97e-19;9!UBERON:0000454;3.97e-19;9!UBERON:0009663;1.16e-17;7!UBERON:0001016;1.29e-16;83!UBERON:0001017;1.39e-16;75!UBERON:0005383;1.14e-15;3!UBERON:0005382;1.14e-15;3!UBERON:0000955;1.21e-15;68!UBERON:0000125;1.11e-13;9!UBERON:0002308;1.11e-13;9!UBERON:0002346;3.04e-12;4!UBERON:0000923;3.04e-12;4!UBERON:0010316;3.04e-12;4!UBERON:0005291;3.04e-12;4!UBERON:0003714;5.89e-11;2!UBERON:0001871;7.99e-11;6!UBERON:0001873;8.12e-11;2!UBERON:0005162;1.68e-10;2!UBERON:0000122;1.68e-10;2!UBERON:0002050;7.01e-10;5!UBERON:0005423;7.01e-10;5!UBERON:0000349;5.39e-09;5!UBERON:0000200;1.79e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,5.46e-50,34;UBERON:0001869,4.73e-48,32;UBERON:0002780,2.35e-45,41;UBERON:0001890,2.35e-45,41;UBERON:0003080,2.35e-45,41;UBERON:0006240,2.35e-45,41;UBERON:0001016,1.27e-43,89;UBERON:0002791,4.16e-43,32;UBERON:0003528,2.09e-40,34;UBERON:0002020,2.09e-40,34;UBERON:0001017,3.76e-39,81;UBERON:0000073,3.41e-34,53;UBERON:0002616,3.41e-34,53;UBERON:0003056,2.66e-32,61;UBERON:0001049,3.88e-32,56;UBERON:0005068,3.88e-32,56;UBERON:0006241,3.88e-32,56;UBERON:0007135,3.88e-32,56;UBERON:0000955,8.03e-31,68;UBERON:0006238,8.03e-31,68;UBERON:0002346,5.28e-29,86;UBERON:0000956,3.94e-28,25;UBERON:0000203,3.94e-28,25;UBERON:0004121,3.99e-25,171;UBERON:0000924,3.99e-25,171;UBERON:0006601,3.99e-25,171;UBERON:0003075,7.64e-23,82;UBERON:0007284,7.64e-23,82;UBERON:0002619,9.62e-23,22;UBERON:0001950,1.03e-20,20;UBERON:0000369,4.22e-20,4;UBERON:0002435,4.22e-20,4;UBERON:0000204,4.22e-20,4;UBERON:0010082,4.22e-20,4;UBERON:0002420,2.98e-19,9;UBERON:0007245,2.98e-19,9;UBERON:0010009,2.98e-19,9;UBERON:0010011,2.98e-19,9;UBERON:0000454,2.98e-19,9;UBERON:0009663,1.05e-17,7;UBERON:0010371,5.29e-17,104;UBERON:0011216,4.22e-16,223;UBERON:0005383,8.92e-16,3;UBERON:0005382,8.92e-16,3;UBERON:0000125,1.03e-13,9;UBERON:0002308,1.03e-13,9;UBERON:0010314,2.22e-12,132;UBERON:0003714,5.75e-11,2;UBERON:0001871,6.06e-11,6;UBERON:0001873,6.35e-11,2;UBERON:0010122,6.35e-11,2;UBERON:0005162,1.77e-10,2;UBERON:0000122,1.77e-10,2;UBERON:0000349,4.82e-09,5;UBERON:0007023,3.18e-08,114;UBERON:0000200,1.81e-07,6;UBERON:0000025,4.99e-07,192 | |||
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| ||
|short_description=p1@VAX1 | |short_description=p1@VAX1 | ||
}} | }} |
Latest revision as of 15:11, 16 September 2015
Short description: | p1@VAX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VAX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_ENST00000277905, ENST00000369206, NM_001112704, NM_199131, uc001ldb.1, uc009xyx.2_5end |
EntrezGene: | VAX1 |
HGNC: | 12660 |
UniProt: | Q5SQQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.88e-15 | 8 |
neural cell | 2.75e-10 | 25 |
neuron | 3.16e-08 | 6 |
neuroblast | 3.16e-08 | 6 |
electrically signaling cell | 3.16e-08 | 6 |
astrocyte of the cerebral cortex | 1.81e-07 | 3 |
neurectodermal cell | 2.08e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.80e-12 | 10 |