FFCP PHASE1:Hg19::chr12:121078535..121078550,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:121078535..121078550,+ to FFCP PHASE1:Hg19::chr12:121078535..121078550,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9478 | |EntrezGene=9478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1384 | |HGNC=1384 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZU7 | |UniProt=Q9NZU7 | ||
|association_with_transcript=113bp_to_BC030201_5end | |||
|cluster_id=chr12:121078535..121078550,+ | |||
|coexpression_cluster_id=C2190 | |||
|description=CAGE_peak_1_at_CABP1_5end | |||
|id=chr12:121078535..121078550,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.98e-08!6;CL:0000031!3.98e-08!6;CL:0000404!3.98e-08!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.36e-21;82!UBERON:0006215;1.91e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.17e-77!82;UBERON:0001049!3.23e-76!57;UBERON:0005068!3.23e-76!57;UBERON:0006241!3.23e-76!57;UBERON:0007135!3.23e-76!57;UBERON:0005743!1.87e-75!86;UBERON:0000073!7.82e-67!94;UBERON:0001016!7.82e-67!94;UBERON:0002616!2.21e-63!59;UBERON:0000955!1.35e-62!69;UBERON:0006238!1.35e-62!69;UBERON:0002780!1.58e-62!41;UBERON:0001890!1.58e-62!41;UBERON:0006240!1.58e-62!41;UBERON:0003080!8.46e-61!42;UBERON:0001893!2.51e-56!34;UBERON:0002020!3.72e-56!34;UBERON:0003528!3.72e-56!34;UBERON:0003075!2.70e-55!86;UBERON:0007284!2.70e-55!86;UBERON:0002791!4.36e-54!33;UBERON:0001869!1.49e-52!32;UBERON:0002346!3.52e-52!90;UBERON:0002619!3.45e-45!22;UBERON:0007023!1.65e-43!115;UBERON:0001950!3.85e-41!20;UBERON:0003056!5.39e-41!61;UBERON:0000956!3.85e-39!25;UBERON:0000203!3.85e-39!25;UBERON:0000153!1.66e-34!129;UBERON:0007811!1.66e-34!129;UBERON:0000033!7.62e-34!123;UBERON:0004121!9.12e-33!169;UBERON:0000924!1.25e-31!173;UBERON:0006601!1.25e-31!173;UBERON:0002420!1.87e-18!9;UBERON:0007245!1.87e-18!9;UBERON:0010009!1.87e-18!9;UBERON:0010011!1.87e-18!9;UBERON:0000454!1.87e-18!9;UBERON:0002308!2.68e-18!9;UBERON:0000125!2.68e-18!9;UBERON:0003076!5.21e-16!15;UBERON:0003057!5.21e-16!15;UBERON:0000200!1.34e-14!6;UBERON:0009663!1.93e-14!7;UBERON:0001871!7.40e-14!7;UBERON:0000025!9.11e-14!194;UBERON:0001872!3.60e-12!5;UBERON:0002021!4.21e-12!5;UBERON:0000349!9.36e-12!5;UBERON:0004733!5.56e-11!12;UBERON:0002028!5.56e-11!12;UBERON:0007277!5.56e-11!12;UBERON:0004111!2.04e-10!241;UBERON:0004732!5.20e-10!13;UBERON:0002298!1.15e-09!8;UBERON:0000475!2.81e-09!365;UBERON:0000369!3.06e-09!4;UBERON:0002435!3.06e-09!4;UBERON:0000204!3.06e-09!4;UBERON:0010082!3.06e-09!4;UBERON:0002680!1.15e-08!9;UBERON:0001895!1.15e-08!9;UBERON:0010092!1.15e-08!9;UBERON:0000064!1.97e-08!219;UBERON:0000477!2.21e-08!286;UBERON:0002771!5.78e-08!3;UBERON:0001894!7.17e-08!7;UBERON:0006222!7.17e-08!7;UBERON:0000988!1.65e-07!3;UBERON:0000483!2.09e-07!309;UBERON:0006331!2.49e-07!3;UBERON:0002240!3.22e-07!3;UBERON:0000119!3.26e-07!312;UBERON:0005383!3.74e-07!3;UBERON:0005382!3.74e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.53e-74;22!UBERON:0001893;3.65e-68;34!UBERON:0001950;7.15e-67;20!UBERON:0000956;5.37e-65;25!UBERON:0000203;5.37e-65;25!UBERON:0003528;5.78e-65;34!UBERON:0002020;5.78e-65;34!UBERON:0001869;2.71e-63;32!UBERON:0002791;8.70e-63;32!UBERON:0000073;1.09e-56;53!UBERON:0002616;1.09e-56;53!UBERON:0002780;2.14e-56;41!UBERON:0001890;2.14e-56;41!UBERON:0000955;6.76e-41;68!UBERON:0001017;1.82e-37;75!UBERON:0001016;9.51e-30;83!UBERON:0000200;4.80e-25;6!UBERON:0001872;9.50e-21;5!UBERON:0001871;2.55e-20;6!UBERON:0000349;6.54e-20;5!UBERON:0004733;1.57e-19;12!UBERON:0002028;1.57e-19;12!UBERON:0004732;6.26e-18;13!UBERON:0002298;5.47e-16;6!UBERON:0007023;1.31e-15;114!UBERON:0002680;4.02e-15;9!UBERON:0001895;4.02e-15;9!UBERON:0002420;5.53e-15;9!UBERON:0007245;5.53e-15;9!UBERON:0010009;5.53e-15;9!UBERON:0010011;5.53e-15;9!UBERON:0000454;5.53e-15;9!UBERON:0000125;8.51e-15;9!UBERON:0002308;8.51e-15;9!UBERON:0002021;4.75e-14;5!UBERON:0001870;2.54e-13;3!UBERON:0011216;9.69e-13;132!UBERON:0000988;2.83e-12;3!UBERON:0002702;1.97e-09;2!UBERON:0002771;2.63e-09;2!UBERON:0001905;2.74e-09;2!UBERON:0002757;2.74e-09;2!UBERON:0010134;2.74e-09;2!UBERON:0005408;2.74e-09;2!UBERON:0001899;2.74e-09;2!UBERON:0000369;2.84e-09;4!UBERON:0002435;2.84e-09;4!UBERON:0000204;2.84e-09;4!UBERON:0001876;5.47e-09;2!UBERON:0009663;6.52e-09;7!UBERON:0001954;6.96e-09;2!UBERON:0003022;6.96e-09;2!UBERON:0002421;6.96e-09;2!UBERON:0002600;6.96e-09;2!UBERON:0002360;7.24e-09;2!UBERON:0000094;7.24e-09;2!UBERON:0010743;7.24e-09;2!UBERON:0002148;1.08e-08;2!UBERON:0006331;1.08e-08;2!UBERON:0009662;1.08e-08;2!UBERON:0010314;1.87e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.37e-104,56;UBERON:0005068,4.37e-104,56;UBERON:0006241,4.37e-104,56;UBERON:0007135,4.37e-104,56;UBERON:0000073,2.44e-99,53;UBERON:0002616,2.44e-99,53;UBERON:0001017,4.32e-93,81;UBERON:0000955,4.02e-88,68;UBERON:0006238,4.02e-88,68;UBERON:0001016,4.59e-83,89;UBERON:0002780,5.35e-80,41;UBERON:0001890,5.35e-80,41;UBERON:0003080,5.35e-80,41;UBERON:0006240,5.35e-80,41;UBERON:0001893,3.02e-78,34;UBERON:0003528,5.64e-78,34;UBERON:0002020,5.64e-78,34;UBERON:0002619,3.66e-74,22;UBERON:0001869,1.17e-71,32;UBERON:0002791,4.49e-71,32;UBERON:0003075,1.09e-68,82;UBERON:0007284,1.09e-68,82;UBERON:0001950,7.43e-67,20;UBERON:0002346,4.06e-65,86;UBERON:0000956,5.55e-65,25;UBERON:0000203,5.55e-65,25;UBERON:0010371,2.04e-52,104;UBERON:0003056,8.53e-52,61;UBERON:0007023,8.25e-51,114;UBERON:0010314,3.72e-44,132;UBERON:0004121,1.94e-39,171;UBERON:0000924,1.94e-39,171;UBERON:0006601,1.94e-39,171;UBERON:0011216,3.69e-31,223;UBERON:0000200,4.81e-25,6;UBERON:0000025,2.08e-24,192;UBERON:0003076,7.24e-24,15;UBERON:0003057,7.24e-24,15;UBERON:0001872,1.16e-20,5;UBERON:0001871,2.27e-20,6;UBERON:0000349,6.54e-20,5;UBERON:0004733,1.53e-19,12;UBERON:0002028,1.53e-19,12;UBERON:0007277,1.53e-19,12;UBERON:0004732,6.12e-18,13;UBERON:0004111,9.44e-18,240;UBERON:0002298,5.30e-16,6;UBERON:0002680,4.02e-15,9;UBERON:0001895,4.02e-15,9;UBERON:0010092,4.02e-15,9;UBERON:0002420,6.20e-15,9;UBERON:0007245,6.20e-15,9;UBERON:0010009,6.20e-15,9;UBERON:0010011,6.20e-15,9;UBERON:0000454,6.20e-15,9;UBERON:0000125,9.53e-15,9;UBERON:0002308,9.53e-15,9;UBERON:0002021,4.68e-14,5;UBERON:0001870,2.54e-13,3;UBERON:0000988,2.83e-12,3;UBERON:0000483,5.23e-12,306;UBERON:0000119,8.34e-12,309;UBERON:0002702,1.97e-09,2;UBERON:0002771,2.63e-09,2;UBERON:0001905,2.74e-09,2;UBERON:0002757,2.74e-09,2;UBERON:0010134,2.74e-09,2;UBERON:0005408,2.74e-09,2;UBERON:0001899,2.74e-09,2;UBERON:0000369,2.93e-09,4;UBERON:0002435,2.93e-09,4;UBERON:0000204,2.93e-09,4;UBERON:0010082,2.93e-09,4;UBERON:0001876,5.47e-09,2;UBERON:0001954,6.96e-09,2;UBERON:0003022,6.96e-09,2;UBERON:0002421,6.96e-09,2;UBERON:0002600,6.96e-09,2;UBERON:0009663,7.18e-09,7;UBERON:0002360,7.24e-09,2;UBERON:0000094,7.24e-09,2;UBERON:0010743,7.24e-09,2;UBERON:0002148,1.08e-08,2;UBERON:0006331,1.08e-08,2;UBERON:0009662,1.08e-08,2 | |||
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| ||
|short_description=p1@CABP1 | |||
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Latest revision as of 20:40, 16 September 2015
Short description: | p1@CABP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CABP1_5end |
Coexpression cluster: | C2190_rhabdomyosarcoma_occipital_postcentral_brain_paracentral_temporal_parietal |
Association with transcript: | 113bp_to_BC030201_5end |
EntrezGene: | CABP1 |
HGNC: | 1384 |
UniProt: | Q9NZU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data