FFCP PHASE1:Hg19::chr11:1411130..1411197,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:1411130..1411197,+
|short_description=p1@BRSK2
|description=CAGE_peak_1_at_BRSK2_5end
|association_with_transcript=0bp_to_ENST00000308230,ENST00000528841,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9024 | |EntrezGene=9024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11405 | |HGNC=11405 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000308230,ENST00000528841,ENST00000529433,ENST00000531197_5end | |||
|cluster_id=chr11:1411130..1411197,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_BRSK2_5end | |||
|id=chr11:1411130..1411197,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.94e-07;6!CL:0000404;3.94e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.33e-08,8;CL:0000540,3.98e-07,6;CL:0000031,3.98e-07,6;CL:0000404,3.98e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.57e-16;82!CL:0000031;3.94e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!4.98e-12!143;DOID:305!5.66e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.20e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.25e-41!94;UBERON:0001016!1.25e-41!94;UBERON:0005743!5.64e-40!86;UBERON:0001017!8.48e-39!82;UBERON:0001049!1.50e-32!57;UBERON:0005068!1.50e-32!57;UBERON:0006241!1.50e-32!57;UBERON:0007135!1.50e-32!57;UBERON:0000955!3.86e-31!69;UBERON:0006238!3.86e-31!69;UBERON:0002346!1.37e-29!90;UBERON:0003075!1.14e-27!86;UBERON:0007284!1.14e-27!86;UBERON:0002780!1.43e-27!41;UBERON:0001890!1.43e-27!41;UBERON:0006240!1.43e-27!41;UBERON:0002616!1.26e-26!59;UBERON:0003080!2.25e-26!42;UBERON:0001893!5.59e-23!34;UBERON:0002020!8.09e-23!34;UBERON:0003528!8.09e-23!34;UBERON:0002791!3.29e-22!33;UBERON:0000924!8.20e-22!173;UBERON:0006601!8.20e-22!173;UBERON:0001869!1.58e-21!32;UBERON:0007023!9.22e-21!115;UBERON:0004121!3.13e-20!169;UBERON:0003056!3.49e-20!61;UBERON:0002619!5.04e-18!22;UBERON:0001950!1.16e-16!20;UBERON:0000956!1.17e-16!25;UBERON:0000203!1.17e-16!25;UBERON:0000033!7.20e-15!123;UBERON:0000153!1.59e-14!129;UBERON:0007811!1.59e-14!129;UBERON:0000064!2.20e-11!219;UBERON:0000062!6.25e-09!511;UBERON:0002420!1.08e-07!9;UBERON:0007245!1.08e-07!9;UBERON:0010009!1.08e-07!9;UBERON:0010011!1.08e-07!9;UBERON:0000454!1.08e-07!9;UBERON:0002308!1.24e-07!9;UBERON:0000125!1.24e-07!9;UBERON:0003076!1.95e-07!15;UBERON:0003057!1.95e-07!15;UBERON:0000468!4.27e-07!659;UBERON:0001871!5.28e-07!7;UBERON:0000922!5.71e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.27e-30;41!UBERON:0001890;1.27e-30;41!UBERON:0001893;1.54e-29;34!UBERON:0003528;3.18e-29;34!UBERON:0002020;3.18e-29;34!UBERON:0001869;4.47e-29;32!UBERON:0002791;5.71e-29;32!UBERON:0002619;7.46e-29;22!UBERON:0000073;3.87e-28;53!UBERON:0002616;3.87e-28;53!UBERON:0001950;1.33e-26;20!UBERON:0000956;1.83e-24;25!UBERON:0000203;1.83e-24;25!UBERON:0000955;3.95e-22;68!UBERON:0001017;1.26e-21;75!UBERON:0001016;2.30e-20;83!UBERON:0002420;1.08e-11;9!UBERON:0007245;1.08e-11;9!UBERON:0010009;1.08e-11;9!UBERON:0010011;1.08e-11;9!UBERON:0000454;1.08e-11;9!UBERON:0000125;1.25e-11;9!UBERON:0002308;1.25e-11;9!UBERON:0004732;1.86e-09;13!UBERON:0009663;1.95e-09;7!UBERON:0001871;2.62e-09;6!UBERON:0007023;4.92e-09;114!UBERON:0000200;4.92e-09;6!UBERON:0001894;6.23e-09;7!UBERON:0000922;2.04e-08;49!UBERON:0004733;2.32e-08;12!UBERON:0002028;2.32e-08;12!UBERON:0011216;2.85e-08;132!UBERON:0002298;4.16e-08;6!UBERON:0001872;6.29e-08;5!UBERON:0002021;7.79e-08;5!UBERON:0000349;2.65e-07;5!UBERON:0001737;3.32e-07;9!UBERON:0001557;3.32e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.57e-60,81;UBERON:0001016,3.53e-59,89;UBERON:0001049,1.02e-52,56;UBERON:0005068,1.02e-52,56;UBERON:0006241,1.02e-52,56;UBERON:0007135,1.02e-52,56;UBERON:0000073,2.15e-49,53;UBERON:0002616,2.15e-49,53;UBERON:0000955,1.26e-48,68;UBERON:0006238,1.26e-48,68;UBERON:0002346,6.61e-43,86;UBERON:0002780,1.79e-42,41;UBERON:0001890,1.79e-42,41;UBERON:0003080,1.79e-42,41;UBERON:0006240,1.79e-42,41;UBERON:0003075,8.66e-40,82;UBERON:0007284,8.66e-40,82;UBERON:0001893,7.27e-35,34;UBERON:0003528,1.32e-34,34;UBERON:0002020,1.32e-34,34;UBERON:0001869,1.80e-32,32;UBERON:0002791,2.35e-32,32;UBERON:0011216,1.47e-31,223;UBERON:0003056,3.33e-31,61;UBERON:0004121,1.33e-29,171;UBERON:0000924,1.33e-29,171;UBERON:0006601,1.33e-29,171;UBERON:0010371,1.33e-29,104;UBERON:0002619,7.98e-29,22;UBERON:0001950,1.45e-26,20;UBERON:0000956,1.94e-24,25;UBERON:0000203,1.94e-24,25;UBERON:0007023,2.42e-24,114;UBERON:0010314,5.89e-20,132;UBERON:0002420,1.04e-11,9;UBERON:0007245,1.04e-11,9;UBERON:0010009,1.04e-11,9;UBERON:0010011,1.04e-11,9;UBERON:0000454,1.04e-11,9;UBERON:0000125,1.30e-11,9;UBERON:0002308,1.30e-11,9;UBERON:0003076,2.68e-11,15;UBERON:0003057,2.68e-11,15;UBERON:0004732,1.87e-09,13;UBERON:0009663,1.99e-09,7;UBERON:0001871,2.76e-09,6;UBERON:0000200,4.88e-09,6;UBERON:0001894,6.54e-09,7;UBERON:0006222,6.54e-09,7;UBERON:0000025,9.75e-09,192;UBERON:0004733,2.33e-08,12;UBERON:0002028,2.33e-08,12;UBERON:0007277,2.33e-08,12;UBERON:0002298,4.18e-08,6;UBERON:0001872,6.67e-08,5;UBERON:0002021,7.73e-08,5;UBERON:0000349,2.48e-07,5;UBERON:0001737,3.13e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.572471974262113,0,0.251085279189606,0,0.164201178899891,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,6.54895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0.70296429550139,0,0,0.149448680551801,0.23486899728753,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0.339121184620975,0,0,0,1.58565817968474,1.32529768321485,1.62671520017326,1.45125477021519,2.27088765788066,1.82488679537915,0,0,0,0,0,1.65629520055781,2.52877035117153,1.20505514941741,2.09558548191549,3.4860711054785,2.37270619111097,1.21348177344148,1.56977172100277,1.92373578473195,0,0,0,0,0,0,0,0,2.09080345523293,0.171567810298526,0.878002283269004,0,0.100528972411631,0,0,0,0,1.27523445472584,0.117408694235822,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.952468414382536,0.381988425558278,4.68869788840188,3.4214489204541,0.411309970813294,3.00343057843917,1.14330573052231,0,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0.179060963239896,0,0.394061520403854,0.215627574859517,0.128343036279748,1.27047312111232,10.4111883086097,10.8260433788877,17.9242403907753,19.7761013012481,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,1.37257369524342,0,0,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0.460385919864187,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,1.48418066444991,0,0,0,0,0,3.74664293734029,0.200506470303285,0.0920809889358963,0,0,0,0.451199612907412,0.308061348417659,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.769350375349168,0.656029291399411,0.325378394664303,0.103041011647722,1.09883357782012,1.73269949833235,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,2.24330549367694,4.81239927631679,1.22520107990516,0,0,0,1.27541018183058,0,0,0,0,0,0,0,25.0634477090067,0,0,0,2.55507742614196,0,0.307240764308458,0.223676107892416,0,0,0,0,2.16364542780786,0,0,0,0,6.43210765272421,0.111443384277478,5.68272293612826,0,0,0,15.9063623642608,21.8037595436295,0,0,0,0.398495976502139,0,7.05411693991973,0,0,0,0.0898683511473268,0,0,0.394573622547734,0,0,27.1413168906661,20.2234453992836,39.9227596002388,0.520855522170466,0.174919999992391,0,3.41380344856499,0.508507300585533,0.709163045303809,15.8581951691074,0.583209226766509,8.50762475173132,13.2861207872076,18.0894657938112,32.0421646265875,30.6304550009492,32.5102380848902,19.5253003467036,1.0893846351899,0,0.153900517007594,1.93701494939902,0.69169171316418,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0,3.1097675715467,0.216388639742091,0.995261931078505,0.530745387020035,1.83309043480088,1.77912677208373,1.97702302314405,1.77517314159274,22.3097750166041,0.802577647298789,15.6957178635977,0,0.586993856796269,5.34116834975004,1.18375320854817,1.20990716048664,26.0161847385917,0.758238955541855,6.46390703482318,2.69589297632843,2.65861549082874,6.28884716163448,5.02292669451561,2.38944859545918,0,2.21879476821022,0,0.195984794828755,0.174118413160805,0.34945333648406,0.343972064943233,0.870806981601766,0.292357268344742,0.574808199372465,0.0969890164884194,5.64839210825602,5.64951851951331,0.274083849293502,0,19.8795899301459,1.36885967914362,0.0801588202515337,0,2.59752492456769,2.3054466744657,4.35239065430479,9.26612988454609,0,1.49103042678519,0,4.62074300650288,4.28871669880566,1.83596791745379,0.866851769704557,13.8096666403252,20.398901454907,0,0,0.262887354279314,1.39641200636127,0.2291604240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| ||
|short_description=p1@BRSK2 | |||
}} | }} |
Latest revision as of 21:18, 16 September 2015
Short description: | p1@BRSK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BRSK2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000308230, ENST00000528841, ENST00000529433, ENST00000531197_5end |
EntrezGene: | BRSK2 |
HGNC: | 11405 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.33e-08 | 8 |
neuron | 3.98e-07 | 6 |
neuroblast | 3.98e-07 | 6 |
electrically signaling cell | 3.98e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.20e-07 | 143 |