FFCP PHASE1:Hg19::chr7:150974206..150974255,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6604 | |EntrezGene=6604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11108 | |HGNC=11108 | ||
|TSSclassifier=strong | |||
|UniProt=Q6STE5 | |UniProt=Q6STE5 | ||
|association_with_transcript=0bp_to_NM_003078,uc003wju.2_5end | |association_with_transcript=0bp_to_NM_003078,uc003wju.2_5end | ||
|cluster_id=chr7:150974206..150974255,- | |||
|description=CAGE_peak_1_at_SMARCD3_5end | |description=CAGE_peak_1_at_SMARCD3_5end | ||
|id=chr7:150974206..150974255,- | |id=chr7:150974206..150974255,- | ||
|ontology_enrichment_celltype=CL:0002057!7.57e-21!42;CL:0000860!2.31e-17!45;CL:0000766!8.81e-17!76;CL:0002194!5.43e-16!63;CL:0000576!5.43e-16!63;CL:0000040!5.43e-16!63;CL:0000559!5.43e-16!63;CL:0000839!1.62e-14!70;CL:0002009!2.29e-14!65;CL:0000557!3.21e-14!71 | |ontology_enrichment_celltype=CL:0002057!7.57e-21!42;CL:0000860!2.31e-17!45;CL:0000766!8.81e-17!76;CL:0002194!5.43e-16!63;CL:0000576!5.43e-16!63;CL:0000040!5.43e-16!63;CL:0000559!5.43e-16!63;CL:0000839!1.62e-14!70;CL:0002009!2.29e-14!65;CL:0000557!3.21e-14!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-17;33!CL:0002057;1.41e-17;33!CL:0000473;9.24e-15;39!CL:0000234;9.24e-15;39!CL:0000576;3.13e-14;48!CL:0000766;4.94e-10;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.41e-17;33!CL:0002057;1.41e-17;33!CL:0000473;9.24e-15;39!CL:0000234;9.24e-15;39!CL:0000576;3.13e-14;48!CL:0000766;4.94e-10;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.97e-21,42;CL:0002057,5.97e-21,42;CL:0000473,8.78e-21,48;CL:0000234,8.78e-21,48;CL:0000766,2.17e-19,72;CL:0002194,6.52e-19,59;CL:0000576,6.52e-19,59;CL:0000040,6.52e-19,59;CL:0000559,6.52e-19,59;CL:0002009,5.35e-17,61;CL:0000839,8.13e-17,66;CL:0000557,1.24e-16,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-15;42!UBERON:0006601;2.08e-08;82 | |ontology_enrichment_development_v019=CL:0002057;1.59e-15;42!UBERON:0006601;2.08e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.39e-30!86;UBERON:0001017!3.72e-29!82;UBERON:0000073!8.80e-29!94;UBERON:0001016!8.80e-29!94;UBERON:0001049!2.01e-27!57;UBERON:0005068!2.01e-27!57;UBERON:0006241!2.01e-27!57;UBERON:0007135!2.01e-27!57;UBERON:0000955!1.22e-26!69;UBERON:0006238!1.22e-26!69;UBERON:0002616!8.86e-26!59;UBERON:0002346!1.15e-25!90;UBERON:0007023!7.34e-24!115;UBERON:0003075!7.57e-24!86;UBERON:0007284!7.57e-24!86;UBERON:0002780!5.64e-21!41;UBERON:0001890!5.64e-21!41;UBERON:0006240!5.64e-21!41;UBERON:0003080!7.01e-21!42;UBERON:0002020!3.80e-18!34;UBERON:0003528!3.80e-18!34;UBERON:0001893!3.93e-18!34;UBERON:0003056!1.10e-17!61;UBERON:0002791!1.61e-17!33;UBERON:0001869!2.06e-17!32;UBERON:0000033!6.11e-17!123;UBERON:0000922!2.26e-16!612;UBERON:0002050!3.17e-16!605;UBERON:0005423!3.17e-16!605;UBERON:0000923!3.78e-16!604;UBERON:0005291!3.78e-16!604;UBERON:0006598!3.78e-16!604;UBERON:0002532!3.78e-16!604;UBERON:0000924!4.53e-16!173;UBERON:0006601!4.53e-16!173;UBERON:0000153!9.74e-16!129;UBERON:0007811!9.74e-16!129;UBERON:0004121!1.04e-14!169;UBERON:0000468!3.56e-14!659;UBERON:0002619!8.28e-14!22;UBERON:0000956!2.03e-13!25;UBERON:0000203!2.03e-13!25;UBERON:0001950!1.08e-12!20;UBERON:0000480!1.56e-12!626;UBERON:0000062!1.72e-12!511;UBERON:0000467!2.18e-12!625;UBERON:0001474!2.69e-12!86;UBERON:0002390!4.65e-12!102;UBERON:0003061!4.65e-12!102;UBERON:0002371!4.71e-12!80;UBERON:0004765!1.84e-10!101;UBERON:0001434!1.84e-10!101;UBERON:0002193!5.30e-10!112;UBERON:0003076!1.06e-07!15;UBERON:0003057!1.06e-07!15;UBERON:0002204!2.99e-07!167 | |ontology_enrichment_uberon=UBERON:0005743!3.39e-30!86;UBERON:0001017!3.72e-29!82;UBERON:0000073!8.80e-29!94;UBERON:0001016!8.80e-29!94;UBERON:0001049!2.01e-27!57;UBERON:0005068!2.01e-27!57;UBERON:0006241!2.01e-27!57;UBERON:0007135!2.01e-27!57;UBERON:0000955!1.22e-26!69;UBERON:0006238!1.22e-26!69;UBERON:0002616!8.86e-26!59;UBERON:0002346!1.15e-25!90;UBERON:0007023!7.34e-24!115;UBERON:0003075!7.57e-24!86;UBERON:0007284!7.57e-24!86;UBERON:0002780!5.64e-21!41;UBERON:0001890!5.64e-21!41;UBERON:0006240!5.64e-21!41;UBERON:0003080!7.01e-21!42;UBERON:0002020!3.80e-18!34;UBERON:0003528!3.80e-18!34;UBERON:0001893!3.93e-18!34;UBERON:0003056!1.10e-17!61;UBERON:0002791!1.61e-17!33;UBERON:0001869!2.06e-17!32;UBERON:0000033!6.11e-17!123;UBERON:0000922!2.26e-16!612;UBERON:0002050!3.17e-16!605;UBERON:0005423!3.17e-16!605;UBERON:0000923!3.78e-16!604;UBERON:0005291!3.78e-16!604;UBERON:0006598!3.78e-16!604;UBERON:0002532!3.78e-16!604;UBERON:0000924!4.53e-16!173;UBERON:0006601!4.53e-16!173;UBERON:0000153!9.74e-16!129;UBERON:0007811!9.74e-16!129;UBERON:0004121!1.04e-14!169;UBERON:0000468!3.56e-14!659;UBERON:0002619!8.28e-14!22;UBERON:0000956!2.03e-13!25;UBERON:0000203!2.03e-13!25;UBERON:0001950!1.08e-12!20;UBERON:0000480!1.56e-12!626;UBERON:0000062!1.72e-12!511;UBERON:0000467!2.18e-12!625;UBERON:0001474!2.69e-12!86;UBERON:0002390!4.65e-12!102;UBERON:0003061!4.65e-12!102;UBERON:0002371!4.71e-12!80;UBERON:0004765!1.84e-10!101;UBERON:0001434!1.84e-10!101;UBERON:0002193!5.30e-10!112;UBERON:0003076!1.06e-07!15;UBERON:0003057!1.06e-07!15;UBERON:0002204!2.99e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.10e-16;32!UBERON:0003528;8.50e-16;34!UBERON:0002020;8.50e-16;34!UBERON:0001893;9.01e-16;34!UBERON:0002791;1.17e-15;32!UBERON:0002780;1.85e-15;41!UBERON:0001890;1.85e-15;41!UBERON:0000073;2.57e-15;53!UBERON:0002616;2.57e-15;53!UBERON:0002619;6.39e-14;22!UBERON:0000956;1.56e-13;25!UBERON:0000203;1.56e-13;25!UBERON:0001950;8.54e-13;20!UBERON:0001017;1.22e-12;75!UBERON:0000955;1.23e-12;68!UBERON:0001016;7.31e-11;83 | |ontology_enrichment_uberon_v019=UBERON:0001869;8.10e-16;32!UBERON:0003528;8.50e-16;34!UBERON:0002020;8.50e-16;34!UBERON:0001893;9.01e-16;34!UBERON:0002791;1.17e-15;32!UBERON:0002780;1.85e-15;41!UBERON:0001890;1.85e-15;41!UBERON:0000073;2.57e-15;53!UBERON:0002616;2.57e-15;53!UBERON:0002619;6.39e-14;22!UBERON:0000956;1.56e-13;25!UBERON:0000203;1.56e-13;25!UBERON:0001950;8.54e-13;20!UBERON:0001017;1.22e-12;75!UBERON:0000955;1.23e-12;68!UBERON:0001016;7.31e-11;83 | ||
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| ||
|short_description=p1@SMARCD3 | |short_description=p1@SMARCD3 | ||
}} | }} |
Latest revision as of 06:15, 17 September 2015
Short description: | p1@SMARCD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMARCD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_003078, uc003wju.2_5end |
EntrezGene: | SMARCD3 |
HGNC: | 11108 |
UniProt: | Q6STE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.97e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.97e-21 | 42 |
defensive cell | 8.78e-21 | 48 |
phagocyte | 8.78e-21 | 48 |
myeloid leukocyte | 2.17e-19 | 72 |
monopoietic cell | 6.52e-19 | 59 |
monocyte | 6.52e-19 | 59 |
monoblast | 6.52e-19 | 59 |
promonocyte | 6.52e-19 | 59 |
macrophage dendritic cell progenitor | 5.35e-17 | 61 |
myeloid lineage restricted progenitor cell | 8.13e-17 | 66 |
granulocyte monocyte progenitor cell | 1.24e-16 | 67 |