FFCP PHASE1:Hg19::chr1:35391126..35391133,-: Difference between revisions
From FANTOM5_SSTAR
Created page with "{{FFCP
|id=chr1:35391126..35391133,-
|short_description=p8@DLGAP3
|description=CAGE_peak_8_at_DLGAP3_5end
|association_with_transcript=-31bp_to_ENST00000495979_5end
|Entr..." |
No edit summary |
||
| (11 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58512 | |EntrezGene=58512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30368 | |HGNC=30368 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000495979_5end | |||
|cluster_id=chr1:35391126..35391133,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_8_at_DLGAP3_5end | |||
|id=chr1:35391126..35391133,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;8.64e-26;1!UBERON:0010122;7.77e-14;2!UBERON:0006601;3.03e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!6.47e-91!41;UBERON:0001890!6.47e-91!41;UBERON:0006240!6.47e-91!41;UBERON:0003080!1.05e-88!42;UBERON:0001869!1.27e-80!32;UBERON:0001893!8.32e-76!34;UBERON:0002791!2.77e-70!33;UBERON:0001049!2.81e-70!57;UBERON:0005068!2.81e-70!57;UBERON:0006241!2.81e-70!57;UBERON:0007135!2.81e-70!57;UBERON:0002020!3.56e-68!34;UBERON:0003528!3.56e-68!34;UBERON:0002616!8.56e-68!59;UBERON:0000955!1.81e-61!69;UBERON:0006238!1.81e-61!69;UBERON:0003056!2.98e-60!61;UBERON:0001017!1.31e-55!82;UBERON:0005743!6.99e-53!86;UBERON:0003075!1.98e-49!86;UBERON:0007284!1.98e-49!86;UBERON:0002619!1.67e-48!22;UBERON:0000073!1.44e-47!94;UBERON:0001016!1.44e-47!94;UBERON:0002346!4.59e-47!90;UBERON:0007023!1.05e-42!115;UBERON:0000956!1.24e-42!25;UBERON:0000203!1.24e-42!25;UBERON:0001950!3.78e-38!20;UBERON:0002420!2.50e-37!9;UBERON:0007245!2.50e-37!9;UBERON:0010009!2.50e-37!9;UBERON:0010011!2.50e-37!9;UBERON:0000454!2.50e-37!9;UBERON:0000033!6.60e-36!123;UBERON:0009663!7.27e-36!7;UBERON:0000153!4.68e-34!129;UBERON:0007811!4.68e-34!129;UBERON:0000369!2.83e-29!4;UBERON:0002435!2.83e-29!4;UBERON:0000204!2.83e-29!4;UBERON:0010082!2.83e-29!4;UBERON:0002308!8.31e-28!9;UBERON:0000125!8.31e-28!9;UBERON:0004121!7.37e-25!169;UBERON:0000924!3.44e-24!173;UBERON:0006601!3.44e-24!173;UBERON:0000349!2.12e-22!5;UBERON:0005383!2.30e-22!3;UBERON:0005382!2.30e-22!3;UBERON:0000200!9.05e-19!6;UBERON:0000025!8.28e-18!194;UBERON:0001894!6.46e-16!7;UBERON:0006222!6.46e-16!7;UBERON:0001873!2.05e-15!2;UBERON:0010122!2.05e-15!2;UBERON:0001954!9.67e-15!2;UBERON:0003022!9.67e-15!2;UBERON:0002421!9.67e-15!2;UBERON:0002600!9.67e-15!2;UBERON:0001897!1.11e-14!2;UBERON:0001875!1.93e-14!2;UBERON:0006514!1.93e-14!2;UBERON:0001871!5.74e-14!7;UBERON:0004111!1.84e-13!241;UBERON:0002021!2.46e-13!5;UBERON:0000477!8.53e-12!286;UBERON:0000483!1.43e-10!309;UBERON:0000119!2.01e-10!312;UBERON:0002771!5.18e-10!3;UBERON:0000064!6.34e-10!219;UBERON:0000475!4.00e-09!365;UBERON:0001874!1.05e-08!1;UBERON:0001882!1.13e-08!1;UBERON:0005403!1.13e-08!1;UBERON:0002022!1.41e-08!1;UBERON:0002581!1.52e-08!1;UBERON:0007190!2.02e-08!1;UBERON:0002902!2.33e-08!1;UBERON:0009899!2.33e-08!1;UBERON:0003112!2.69e-08!1;UBERON:0000032!2.69e-08!1;UBERON:0005253!2.69e-08!1;UBERON:0003128!2.69e-08!1;UBERON:0002241!2.69e-08!1;UBERON:0001703!2.69e-08!1;UBERON:0004761!2.69e-08!1;UBERON:0009617!2.69e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.96e-56;4!UBERON:0002435;1.96e-56;4!UBERON:0000204;1.96e-56;4!UBERON:0002791;3.72e-34;32!UBERON:0005383;3.93e-34;3!UBERON:0005382;3.93e-34;3!UBERON:0001869;5.66e-34;32!UBERON:0009663;1.15e-32;7!UBERON:0001893;2.29e-32;34!UBERON:0003528;5.62e-31;34!UBERON:0002020;5.62e-31;34!UBERON:0002780;3.14e-30;41!UBERON:0001890;3.14e-30;41!UBERON:0001882;3.15e-26;1!UBERON:0001874;3.15e-26;1!UBERON:0005403;3.15e-26;1!UBERON:0002581;8.64e-26;1!UBERON:0002022;8.64e-26;1!UBERON:0002420;1.32e-25;9!UBERON:0000125;1.32e-25;9!UBERON:0007245;1.32e-25;9!UBERON:0002308;1.32e-25;9!UBERON:0010009;1.32e-25;9!UBERON:0010011;1.32e-25;9!UBERON:0000454;1.32e-25;9!UBERON:0000073;2.70e-20;53!UBERON:0002616;2.70e-20;53!UBERON:0001950;3.24e-19;20!UBERON:0002619;1.36e-17;22!UBERON:0000955;2.85e-16;68!UBERON:0000956;1.27e-15;25!UBERON:0000203;1.27e-15;25!UBERON:0001873;7.77e-14;2!UBERON:0001017;6.69e-13;75!UBERON:0001016;3.28e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.60e-56,4;UBERON:0002435,2.60e-56,4;UBERON:0000204,2.60e-56,4;UBERON:0010082,2.60e-56,4;UBERON:0002780,1.56e-37,41;UBERON:0001890,1.56e-37,41;UBERON:0003080,1.56e-37,41;UBERON:0006240,1.56e-37,41;UBERON:0002791,1.09e-36,32;UBERON:0001869,1.09e-36,32;UBERON:0003528,1.31e-34,34;UBERON:0002020,1.31e-34,34;UBERON:0001893,1.31e-34,34;UBERON:0005383,4.66e-34,3;UBERON:0005382,4.66e-34,3;UBERON:0009663,1.35e-32,7;UBERON:0000073,3.04e-29,53;UBERON:0002616,3.04e-29,53;UBERON:0001049,1.03e-27,56;UBERON:0005068,1.03e-27,56;UBERON:0006241,1.03e-27,56;UBERON:0007135,1.03e-27,56;UBERON:0001874,2.78e-26,1;UBERON:0001882,3.58e-26,1;UBERON:0005403,3.58e-26,1;UBERON:0002022,7.62e-26,1;UBERON:0002581,9.79e-26,1;UBERON:0002420,1.50e-25,9;UBERON:0000125,1.50e-25,9;UBERON:0007245,1.50e-25,9;UBERON:0002308,1.50e-25,9;UBERON:0010009,1.50e-25,9;UBERON:0010011,1.50e-25,9;UBERON:0000454,1.50e-25,9;UBERON:0003056,1.71e-25,61;UBERON:0000955,1.35e-22,68;UBERON:0006238,1.35e-22,68;UBERON:0001950,2.81e-19,20;UBERON:0001017,4.48e-19,81;UBERON:0003075,4.48e-19,82;UBERON:0007284,4.48e-19,82;UBERON:0002346,3.34e-18,86;UBERON:0002619,1.19e-17,22;UBERON:0001016,3.23e-17,89;UBERON:0000956,1.13e-15,25;UBERON:0000203,1.13e-15,25;UBERON:0010371,4.31e-15,104;UBERON:0007023,6.68e-14,114;UBERON:0001873,9.40e-14,2;UBERON:0010122,9.40e-14,2;UBERON:0010314,6.49e-12,132;UBERON:0004121,4.33e-09,171;UBERON:0000924,4.33e-09,171;UBERON:0006601,4.33e-09,171;UBERON:0000025,3.49e-08,192;UBERON:0011216,6.23e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,2.05013945663194,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24802287837608,2.8339315265117,0,0.615349092722265,0,0.691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0,0,0.634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,1.18390992413128,0,0,0,2.51384943865603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49581278420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0.885741385813839,2.05013945663194,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1713222286267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24802287837608,2.8339315265117,0,0.615349092722265,0,0.691572524642179,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810451015420736,0,0,0.634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,1.18390992413128,0,0,0,2.51384943865603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49581278420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@DLGAP3 | |||
}} | }} | ||
Latest revision as of 18:11, 17 September 2015
| Short description: | p8@DLGAP3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_DLGAP3_5end |
| Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
| Association with transcript: | -31bp_to_ENST00000495979_5end |
| EntrezGene: | DLGAP3 |
| HGNC: | 30368 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data