FFCP PHASE1:Hg19::chr9:87284675..87284698,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8032 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000277120,ENST00000304053,ENST00000376208_5end | |||
|cluster_id=chr9:87284675..87284698,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_NTRK2_5end | |||
|id=chr9:87284675..87284698,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.42e-16;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-61!115;UBERON:0001049!5.71e-45!57;UBERON:0005068!5.71e-45!57;UBERON:0006241!5.71e-45!57;UBERON:0007135!5.71e-45!57;UBERON:0001017!2.57e-39!82;UBERON:0005743!1.35e-38!86;UBERON:0003075!4.43e-38!86;UBERON:0007284!4.43e-38!86;UBERON:0002616!6.64e-38!59;UBERON:0002346!8.27e-36!90;UBERON:0000955!1.30e-35!69;UBERON:0006238!1.30e-35!69;UBERON:0003080!4.01e-35!42;UBERON:0002780!1.80e-34!41;UBERON:0001890!1.80e-34!41;UBERON:0006240!1.80e-34!41;UBERON:0000073!2.55e-34!94;UBERON:0001016!2.55e-34!94;UBERON:0001893!2.79e-29!34;UBERON:0002020!2.92e-29!34;UBERON:0003528!2.92e-29!34;UBERON:0003056!9.81e-29!61;UBERON:0002791!2.38e-28!33;UBERON:0000153!2.43e-28!129;UBERON:0007811!2.43e-28!129;UBERON:0001869!1.14e-27!32;UBERON:0000033!2.76e-27!123;UBERON:0004121!2.24e-24!169;UBERON:0000924!1.82e-23!173;UBERON:0006601!1.82e-23!173;UBERON:0000956!1.62e-21!25;UBERON:0000203!1.62e-21!25;UBERON:0002619!4.76e-21!22;UBERON:0001950!3.48e-19!20;UBERON:0000477!3.85e-13!286;UBERON:0000481!8.31e-12!347;UBERON:0000064!1.28e-11!219;UBERON:0003076!8.87e-11!15;UBERON:0003057!8.87e-11!15;UBERON:0000025!1.98e-10!194;UBERON:0004111!2.04e-10!241;UBERON:0000062!2.26e-10!511;UBERON:0002420!2.62e-09!9;UBERON:0007245!2.62e-09!9;UBERON:0010009!2.62e-09!9;UBERON:0010011!2.62e-09!9;UBERON:0000454!2.62e-09!9;UBERON:0000475!3.60e-09!365;UBERON:0002308!3.71e-09!9;UBERON:0000125!3.71e-09!9;UBERON:0004732!3.89e-09!13;UBERON:0004733!1.91e-08!12;UBERON:0002028!1.91e-08!12;UBERON:0007277!1.91e-08!12;UBERON:0001871!4.76e-08!7;UBERON:0002298!8.49e-08!8;UBERON:0000922!9.64e-08!612;UBERON:0000468!1.48e-07!659;UBERON:0009663!1.73e-07!7;UBERON:0002050!5.02e-07!605;UBERON:0005423!5.02e-07!605;UBERON:0000923!9.18e-07!604;UBERON:0005291!9.18e-07!604;UBERON:0006598!9.18e-07!604;UBERON:0002532!9.18e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.69e-31;41!UBERON:0001890;2.69e-31;41!UBERON:0001893;5.68e-31;34!UBERON:0003528;6.97e-31;34!UBERON:0002020;6.97e-31;34!UBERON:0000073;8.10e-31;53!UBERON:0002616;8.10e-31;53!UBERON:0001869;8.68e-31;32!UBERON:0002791;1.19e-30;32!UBERON:0002619;1.73e-28;22!UBERON:0001950;6.58e-26;20!UBERON:0000956;7.05e-26;25!UBERON:0000203;7.05e-26;25!UBERON:0007023;1.27e-21;114!UBERON:0000955;2.27e-20;68!UBERON:0001017;4.87e-20;75!UBERON:0001016;2.13e-17;83!UBERON:0004732;2.74e-12;13!UBERON:0002420;2.96e-12;9!UBERON:0007245;2.96e-12;9!UBERON:0010009;2.96e-12;9!UBERON:0010011;2.96e-12;9!UBERON:0000454;2.96e-12;9!UBERON:0000125;4.85e-12;9!UBERON:0002308;4.85e-12;9!UBERON:0004733;2.47e-11;12!UBERON:0002028;2.47e-11;12!UBERON:0009663;9.60e-10;7!UBERON:0011216;1.34e-09;132!UBERON:0001871;2.32e-09;6!UBERON:0000200;1.17e-08;6!UBERON:0000922;1.21e-08;49!UBERON:0001894;1.88e-08;7!UBERON:0002298;2.83e-08;6!UBERON:0002680;4.36e-08;9!UBERON:0001895;4.36e-08;9!UBERON:0000349;5.65e-08;5!UBERON:0002021;1.62e-07;5!UBERON:0001872;2.10e-07;5!UBERON:0010314;7.71e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.77e-79,114;UBERON:0001049,1.28e-57,56;UBERON:0005068,1.28e-57,56;UBERON:0006241,1.28e-57,56;UBERON:0007135,1.28e-57,56;UBERON:0000073,4.35e-54,53;UBERON:0002616,4.35e-54,53;UBERON:0003075,2.81e-50,82;UBERON:0007284,2.81e-50,82;UBERON:0001017,1.95e-49,81;UBERON:0002346,8.08e-47,86;UBERON:0000955,2.51e-46,68;UBERON:0006238,2.51e-46,68;UBERON:0001016,6.93e-44,89;UBERON:0002780,1.11e-43,41;UBERON:0001890,1.11e-43,41;UBERON:0003080,1.11e-43,41;UBERON:0006240,1.11e-43,41;UBERON:0010371,2.27e-38,104;UBERON:0001893,1.68e-36,34;UBERON:0003528,1.78e-36,34;UBERON:0002020,1.78e-36,34;UBERON:0003056,1.91e-36,61;UBERON:0010314,1.51e-35,132;UBERON:0001869,2.80e-34,32;UBERON:0002791,4.18e-34,32;UBERON:0004121,1.12e-30,171;UBERON:0000924,1.12e-30,171;UBERON:0006601,1.12e-30,171;UBERON:0002619,1.75e-28,22;UBERON:0011216,2.49e-27,223;UBERON:0001950,6.65e-26,20;UBERON:0000956,7.58e-26,25;UBERON:0000203,7.58e-26,25;UBERON:0003076,1.50e-14,15;UBERON:0003057,1.50e-14,15;UBERON:0004111,1.90e-13,240;UBERON:0000025,5.29e-13,192;UBERON:0004732,2.80e-12,13;UBERON:0002420,2.96e-12,9;UBERON:0007245,2.96e-12,9;UBERON:0010009,2.96e-12,9;UBERON:0010011,2.96e-12,9;UBERON:0000454,2.96e-12,9;UBERON:0000125,4.80e-12,9;UBERON:0002308,4.80e-12,9;UBERON:0004733,2.53e-11,12;UBERON:0002028,2.53e-11,12;UBERON:0007277,2.53e-11,12;UBERON:0009663,9.49e-10,7;UBERON:0001871,2.40e-09,6;UBERON:0000922,6.09e-09,592;UBERON:0002050,1.10e-08,564;UBERON:0000200,1.20e-08,6;UBERON:0000923,1.37e-08,560;UBERON:0010316,1.37e-08,560;UBERON:0005291,1.37e-08,560;UBERON:0006598,1.37e-08,560;UBERON:0010317,1.37e-08,560;UBERON:0002532,1.37e-08,560;UBERON:0000483,1.48e-08,306;UBERON:0005423,1.60e-08,581;UBERON:0001894,1.83e-08,7;UBERON:0006222,1.83e-08,7;UBERON:0002298,2.87e-08,6;UBERON:0000119,2.96e-08,309;UBERON:0002680,4.41e-08,9;UBERON:0001895,4.41e-08,9;UBERON:0010092,4.41e-08,9;UBERON:0000349,5.73e-08,5;UBERON:0002021,1.61e-07,5;UBERON:0001872,2.06e-07,5 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,2.00146596706261,0,0,0,0,0,0,0,0.218441372130172,0,0.37129905888014,1.98838425436749,0,0,0,0,7.75662665883764,0,7.20945859399602,1.43117993565528,0.547497700291537,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,1.17903228824749,0.205601498999509,0,0,0.473447805734733,0,0.891283655081389,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0.657751618414705,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,24.0642197105227,6.80778639115871,2.3858578411533,5.35298357332899,8.50813354476611,5.32150553910154,7.99296549807447,31.7624258081953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,1.68203280042692,0,0,0.933633106199299,0,0,0.454072282934794,0,0,0,0,0.149448680551801,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0.358779271377724,0.640672166455702,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,2.48786532036889,0,0,0,2.57296375277154,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,2.36315962672562,0,0,0.343135620597051,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,10.6655972577071,3.05262605013136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,0.144119953416961,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0.76228387266739,3.90419561572865,0.773288812777695,3.35032530668698,7.65526501983796,0,0,0,9.93801082925033,2.00068208423871,0.813795071099207,0.207970861530807,0.356857977594324,0,0.937131319941706,0.902838299183157,0,2.0694614258501,0,0.184369168541703,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0.907170879989041,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0.451199612907412,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0,0,0,0.512900250232778,0,0,1.33953315142039,0.27470839445503,0.41254749960294,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.845086807596724,0.143411352204052,0,0.35667105148125,0,13.2997810237528,3.62224382255892,0,0,0,0.670302275535787,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.0546828011812,0,0,0,0,0,0,160.057771290374,224.227049758357,1.44701316529778,0,0,16.7368310130899,4.14425873296722,0,8.590569330181,0,1.86623752597084,0,25.7790491532877,0,10.0616273749672,0,0,192.897216472948,151.119231905656,113.779864860681,0.260427761085233,0,18.1249893858698,2.50345586228099,0,0,0,0,7.11862479226498,167.405121918816,134.826818383206,51.8777903478083,74.6410004535766,63.5427380750127,158.396256745168,0,1.39423744278603,8.46452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,2.12298154808014,42.1610800004202,8.59911273173804,4.4483018020741,4.80340967725095,123.815881285504,32.9056835392503,160.471145321857,0,0.586993856796269,0,4.3404284313433,9.67925728389311,56.9295336632712,68.8733717950519,0,0,0,0,0,0,0,1.94144542218394,0,0,0,9.78469342155369,0,0,0,0,5.33439590686307,0,54.2353777873278,0,0,184.361037823519,0.195551382734803,0,20.4914874949778,0,0,0,0,0,0,0.235694034616795,0,0,0,0,133.893724382283,120.88744956163,0,10.314370594079,0,35.7481473628485,17.1870318008763,25.8434288847653,1.79711100449092,3.43380838509257,4.24025769139558,5.17312738147792,0,0,0,0,0,0,0,166.203005170144,274.449863314825,0,0,0,0.2249738915515,1.5476039091159,182.37016908739,0,15.2883072160444,18.2017420828443,0,0.35857467866569,0,33.5906803395482,2.64836788146173,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,2.65013777824443,153.329586244799,130.645810521778,0.171086837884329,0,4.0579216775724,20.5937639680562,0.828478110694391,2.97699613087171,0,0,2.55336503108073,83.2347239155295,124.592877329282,135.711090506213,50.8202577600197,0,131.138090635114,132.642549948434,149.227589402148,129.590478225956,143.43126363715,120.404925303343,0,1.49976489554528,0,0,0,0,1.30428925749743,0,0,0,0.378806010550178,1.0062716070103,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,222.085420882426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,135.631525864848,0,0,0,0,0.245772908753719,0,17.3989034393789,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0.123935764259002,0,0,0,0,0,0,178.68570421835,141.696576325585,143.830107010493,223.576837022423,68.5635013723073,169.642740294726,169.872379204707,38.5477434699717,0,1.06172751012966,0,0,0,0,0.596748666348824,10.1533943271497,0,18.7563362695942,0,0.163771917510097,0,169.451799807552,135.907589158809,169.483173130971,150.549133400335,48.1337831936033,4.93431990171464,31.2613042385255,0,0.511049710558381,29.4636009733058,19.5044558886918,7.89055285507621,11.3831095675649,0.443511850813194,0,0,64.231397663106,165.944707699068,0,0,4.39561319962878,160.100786124406,0.280272163313789,32.8737139383418,0,0,15.1530273654511,0,0,0.347716544605159,0,1.45051314914126,5.29227278991245,6.22133695632683,4.73250094702305,0,0,5.08064460229115,0.68732060563215,0,0,0.111855431797792,0,0.731507549893617,0.647428837187895,4.31183788796237,30.1551752147932,33.0283475280215,0.467878926924211,0,0.475680363110274,0.11294608203896,0,0.150962843566674,0.771741581079447,0.218559560503957,0,8.58019126138669,0.942706188406504,133.293449171048,125.056534537703,98.9014402545156,0,2.44358186747619,9.28193586819511,0,0.357107877211315,0,0,2.92134555298607,16.0555249191589,100.051029039713,0,165.491287124686,79.8521763322891,10.580536810308,0.371995018166751,14.7896201162054,0,0,0.109265571963696,0.126698501011437,0,0,0,0,5.98651715924091,1.87574891109325,145.104651905286,152.149936912848,21.5366321719991,66.1819119469198,1.0334225573761,2.04846557176331,0.224263725161227,41.8798301470325,93.984492865572,20.0299408065204,21.902931269458,3.50230675675855,8.75010905790652,72.1872973704849,0.89543595472072,0,0,0,9.38563769613817,4.76741632313179,12.6137815277879,4.66029741929859,15.095534519327,0 | |||
|short_description=p1@NTRK2 | |||
}} |
Latest revision as of 01:07, 18 September 2015
Short description: | p1@NTRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NTRK2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000277120, ENST00000304053, ENST00000376208_5end |
EntrezGene: | NTRK2 |
HGNC: | 8032 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data