FFCP PHASE1:Hg19::chr5:57878895..57878929,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:57878895..57878929,+
|short_description=p1@RAB3C
|description=CAGE_peak_1_at_RAB3C_5end
|association_with_transcript=-9bp_to_NM_138453,uc003jrp.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115827 | |EntrezGene=115827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30269 | |HGNC=30269 | ||
|TSSclassifier=strong | |||
|UniProt=Q96E17 | |UniProt=Q96E17 | ||
|association_with_transcript=-9bp_to_NM_138453,uc003jrp.2_5end | |||
|cluster_id=chr5:57878895..57878929,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_RAB3C_5end | |||
|id=chr5:57878895..57878929,+ | |||
|ontology_enrichment_celltype=CL:0000047!5.33e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.16e-10;6!CL:0000404;9.16e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.00e-09,6;CL:0000031,1.00e-09,6;CL:0000404,1.00e-09,6;CL:0000047,1.29e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.34e-19;82!CL:0000031;9.16e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;4.74e-46;41!UBERON:0001890;4.74e-46;41!UBERON:0001869;2.77e-44;32!UBERON:0003528;3.38e-44;34!UBERON:0002020;3.38e-44;34!UBERON:0001893;4.18e-44;34!UBERON:0002791;8.06e-44;32!UBERON:0002619;3.04e-42;22!UBERON:0000073;1.01e-41;53!UBERON:0002616;1.01e-41;53!UBERON:0001950;1.54e-38;20!UBERON:0000956;1.91e-36;25!UBERON:0000203;1.91e-36;25!UBERON:0000955;3.68e-30;68!UBERON:0001017;1.45e-29;75!UBERON:0001016;3.87e-28;83!UBERON:0002420;2.46e-17;9!UBERON:0007245;2.46e-17;9!UBERON:0010009;2.46e-17;9!UBERON:0010011;2.46e-17;9!UBERON:0000454;2.46e-17;9!UBERON:0000125;4.62e-17;9!UBERON:0002308;4.62e-17;9!UBERON:0007023;4.18e-16;114!UBERON:0009663;1.03e-13;7!UBERON:0001871;1.80e-13;6!UBERON:0001894;2.38e-13;7!UBERON:0004732;3.66e-13;13!UBERON:0000200;1.31e-12;6!UBERON:0011216;5.75e-12;132!UBERON:0004733;7.94e-12;12!UBERON:0002028;7.94e-12;12!UBERON:0002298;1.42e-11;6!UBERON:0000349;7.88e-11;5!UBERON:0001872;1.95e-10;5!UBERON:0002021;2.72e-10;5!UBERON:0000369;2.91e-09;4!UBERON:0002435;2.91e-09;4!UBERON:0000204;2.91e-09;4!UBERON:0003296;3.01e-08;4!UBERON:0010133;3.01e-08;4!UBERON:0002784;3.04e-08;4!UBERON:0002680;1.55e-07;9!UBERON:0001895;1.55e-07;9!UBERON:0005383;2.33e-07;3!UBERON:0005382;2.33e-07;3!UBERON:0001870;2.74e-07;3!UBERON:0010314;3.36e-07;132!UBERON:0000988;7.28e-07;3 | |||
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| ||
|short_description=p1@RAB3C | |||
}} | }} |
Latest revision as of 06:31, 18 September 2015
Short description: | p1@RAB3C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB3C_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -9bp_to_NM_138453, uc003jrp.2_5end |
EntrezGene: | RAB3C |
HGNC: | 30269 |
UniProt: | Q96E17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.00e-09 | 6 |
neuroblast | 1.00e-09 | 6 |
electrically signaling cell | 1.00e-09 | 6 |
neuronal stem cell | 1.29e-09 | 8 |