FFCP PHASE1:Hg19::chr2:175712270..175712316,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:175712270..175712316,- to FFCP PHASE1:Hg19::chr2:175712270..175712316,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3G1 | |UniProt=C9J3G1 | ||
|association_with_transcript=0bp_to_ENST00000295497,ENST00000444394_5end | |||
|cluster_id=chr2:175712270..175712316,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CHN1_5end | |||
|id=chr2:175712270..175712316,- | |||
|ontology_enrichment_celltype=CL:0000055!5.17e-21!180;CL:0000057!2.72e-14!75;CL:0002620!7.08e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.31e-11;23!CL:0000057;4.84e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.11e-14,76;CL:0002620,6.60e-11,23 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.85e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.95e-32!82;UBERON:0005743!1.15e-31!86;UBERON:0000073!2.77e-31!94;UBERON:0001016!2.77e-31!94;UBERON:0000955!6.34e-30!69;UBERON:0006238!6.34e-30!69;UBERON:0002616!9.88e-30!59;UBERON:0001049!6.54e-29!57;UBERON:0005068!6.54e-29!57;UBERON:0006241!6.54e-29!57;UBERON:0007135!6.54e-29!57;UBERON:0000033!3.22e-26!123;UBERON:0000153!6.04e-26!129;UBERON:0007811!6.04e-26!129;UBERON:0004121!6.55e-25!169;UBERON:0003075!8.94e-25!86;UBERON:0007284!8.94e-25!86;UBERON:0002780!7.47e-24!41;UBERON:0001890!7.47e-24!41;UBERON:0006240!7.47e-24!41;UBERON:0000924!2.76e-23!173;UBERON:0006601!2.76e-23!173;UBERON:0003080!1.21e-22!42;UBERON:0002346!2.70e-22!90;UBERON:0001893!1.07e-20!34;UBERON:0002020!2.12e-20!34;UBERON:0003528!2.12e-20!34;UBERON:0003056!2.80e-20!61;UBERON:0002791!5.63e-20!33;UBERON:0001869!6.91e-20!32;UBERON:0000475!1.03e-19!365;UBERON:0007023!2.06e-18!115;UBERON:0000956!2.40e-15!25;UBERON:0000203!2.40e-15!25;UBERON:0002619!8.44e-14!22;UBERON:0001950!1.68e-12!20;UBERON:0000914!3.07e-09!83;UBERON:0002329!3.07e-09!83;UBERON:0003077!3.07e-09!83;UBERON:0003059!3.07e-09!83;UBERON:0007282!3.07e-09!83;UBERON:0009618!3.07e-09!83;UBERON:0007285!3.07e-09!83;UBERON:0000481!7.68e-09!347;UBERON:0002199!7.92e-09!45;UBERON:0002416!7.92e-09!45;UBERON:0003076!1.89e-07!15;UBERON:0003057!1.89e-07!15;UBERON:0002097!3.22e-07!40;UBERON:0003102!3.77e-07!95;UBERON:0000119!5.92e-07!312;UBERON:0002420!6.19e-07!9;UBERON:0007245!6.19e-07!9;UBERON:0010009!6.19e-07!9;UBERON:0010011!6.19e-07!9;UBERON:0000454!6.19e-07!9;UBERON:0000483!9.20e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.77e-20;34!UBERON:0001869;2.29e-19;32!UBERON:0002791;5.69e-19;32!UBERON:0003528;7.39e-19;34!UBERON:0002020;7.39e-19;34!UBERON:0002780;1.99e-18;41!UBERON:0001890;1.99e-18;41!UBERON:0000073;5.14e-18;53!UBERON:0002616;5.14e-18;53!UBERON:0000956;3.46e-16;25!UBERON:0000203;3.46e-16;25!UBERON:0000955;2.18e-15;68!UBERON:0001017;4.62e-15;75!UBERON:0002619;1.79e-14;22!UBERON:0001950;4.81e-13;20!UBERON:0001016;6.22e-12;83!UBERON:0002420;1.63e-07;9!UBERON:0007245;1.63e-07;9!UBERON:0010009;1.63e-07;9!UBERON:0010011;1.63e-07;9!UBERON:0000454;1.63e-07;9!UBERON:0011216;2.29e-07;132!UBERON:0004733;3.25e-07;12!UBERON:0002028;3.25e-07;12!UBERON:0000125;4.90e-07;9!UBERON:0002308;4.90e-07;9!UBERON:0002097;7.09e-07;41!UBERON:0002199;7.27e-07;46!UBERON:0002416;7.27e-07;46 | |||
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| ||
|short_description=p1@CHN1 | |||
}} | }} |
Latest revision as of 08:05, 18 September 2015
Short description: | p1@CHN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000295497, ENST00000444394_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | C9J3G1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.11e-14 | 76 |
skin fibroblast | 6.60e-11 | 23 |