FFCP PHASE1:Hg19::chr5:63461642..63461722,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285671 | |EntrezGene=285671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27752 | |HGNC=27752 | ||
|TSSclassifier=strong | |||
|UniProt=Q86T96 | |UniProt=Q86T96 | ||
|association_with_transcript=0bp_to_ENST00000296615,ENST00000381081,ENST00000389100,NM_001113561,NM_178532,uc003jth.3,uc003jti.2,uc010iws.2_5end | |association_with_transcript=0bp_to_ENST00000296615,ENST00000381081,ENST00000389100,NM_001113561,NM_178532,uc003jth.3,uc003jti.2,uc010iws.2_5end | ||
|cluster_id=chr5:63461642..63461722,+ | |||
|coexpression_cluster_id=C4511 | |||
|description=CAGE_peak_1_at_RNF180_5end | |description=CAGE_peak_1_at_RNF180_5end | ||
|id=chr5:63461642..63461722,+ | |id=chr5:63461642..63461722,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.42e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.10e-41!115;UBERON:0005743!1.34e-36!86;UBERON:0001017!1.55e-35!82;UBERON:0000073!3.28e-34!94;UBERON:0001016!3.28e-34!94;UBERON:0001049!4.75e-34!57;UBERON:0005068!4.75e-34!57;UBERON:0006241!4.75e-34!57;UBERON:0007135!4.75e-34!57;UBERON:0003075!9.59e-32!86;UBERON:0007284!9.59e-32!86;UBERON:0002616!1.08e-31!59;UBERON:0000955!7.16e-30!69;UBERON:0006238!7.16e-30!69;UBERON:0002346!1.61e-29!90;UBERON:0000033!7.36e-27!123;UBERON:0004121!1.20e-26!169;UBERON:0003080!1.20e-26!42;UBERON:0002780!3.27e-26!41;UBERON:0001890!3.27e-26!41;UBERON:0006240!3.27e-26!41;UBERON:0000153!1.13e-25!129;UBERON:0007811!1.13e-25!129;UBERON:0000924!1.78e-25!173;UBERON:0006601!1.78e-25!173;UBERON:0003056!1.52e-24!61;UBERON:0004111!3.01e-22!241;UBERON:0002020!3.68e-22!34;UBERON:0003528!3.68e-22!34;UBERON:0001893!6.93e-22!34;UBERON:0002791!2.73e-21!33;UBERON:0000483!3.25e-21!309;UBERON:0000025!3.62e-21!194;UBERON:0000119!3.97e-21!312;UBERON:0001869!5.68e-21!32;UBERON:0000477!1.73e-20!286;UBERON:0000475!4.06e-18!365;UBERON:0000481!9.87e-17!347;UBERON:0000956!1.42e-16!25;UBERON:0000203!1.42e-16!25;UBERON:0002619!1.36e-15!22;UBERON:0001950!2.43e-14!20;UBERON:0000468!8.56e-13!659;UBERON:0000467!3.02e-11!625;UBERON:0000922!3.87e-11!612;UBERON:0000480!5.25e-11!626;UBERON:0000064!4.99e-10!219;UBERON:0002050!7.55e-10!605;UBERON:0005423!7.55e-10!605;UBERON:0000923!1.36e-09!604;UBERON:0005291!1.36e-09!604;UBERON:0006598!1.36e-09!604;UBERON:0002532!1.36e-09!604;UBERON:0003076!1.63e-08!15;UBERON:0003057!1.63e-08!15;UBERON:0000062!1.99e-08!511;UBERON:0004732!2.05e-07!13;UBERON:0002308!4.88e-07!9;UBERON:0000125!4.88e-07!9;UBERON:0002420!5.92e-07!9;UBERON:0007245!5.92e-07!9;UBERON:0010009!5.92e-07!9;UBERON:0010011!5.92e-07!9;UBERON:0000454!5.92e-07!9;UBERON:0004733!9.42e-07!12;UBERON:0002028!9.42e-07!12;UBERON:0007277!9.42e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.86e-20;34!UBERON:0002020;1.86e-20;34!UBERON:0001869;1.89e-20;32!UBERON:0002780;2.37e-20;41!UBERON:0001890;2.37e-20;41!UBERON:0002791;2.39e-20;32!UBERON:0001893;3.37e-20;34!UBERON:0000073;2.57e-19;53!UBERON:0002616;2.57e-19;53!UBERON:0000956;1.02e-17;25!UBERON:0000203;1.02e-17;25!UBERON:0002619;1.25e-16;22!UBERON:0001950;2.78e-15;20!UBERON:0001017;1.08e-14;75!UBERON:0000955;1.73e-13;68!UBERON:0001016;1.37e-12;83!UBERON:0007023;2.02e-12;114!UBERON:0004732;9.27e-08;13!UBERON:0000125;1.88e-07;9!UBERON:0002308;1.88e-07;9!UBERON:0002420;2.37e-07;9!UBERON:0007245;2.37e-07;9!UBERON:0010009;2.37e-07;9!UBERON:0010011;2.37e-07;9!UBERON:0000454;2.37e-07;9!UBERON:0004733;4.77e-07;12!UBERON:0002028;4.77e-07;12 | |||
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| ||
|short_description=p1@RNF180 | |short_description=p1@RNF180 | ||
}} | }} |
Latest revision as of 09:40, 18 September 2015
Short description: | p1@RNF180 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF180_5end |
Coexpression cluster: | C4511_occipital_ductus_parietal_temporal_aorta_spinal_pituitary |
Association with transcript: | 0bp_to_ENST00000296615, ENST00000381081, ENST00000389100, NM_001113561, NM_178532, uc003jth.3, uc003jti.2, uc010iws.2_5end |
EntrezGene: | RNF180 |
HGNC: | 27752 |
UniProt: | Q86T96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data