FFCP PHASE1:Hg19::chr1:50489547..50489616,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84871 | |EntrezGene=84871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25892 | |HGNC=25892 | ||
|TSSclassifier=strong | |||
|UniProt=B1ANV5,B1AMW3,Q5VU57 | |UniProt=B1ANV5,B1AMW3,Q5VU57 | ||
|association_with_transcript=0bp_to_ENST00000371836,ENST00000371838,ENST00000371839_5end | |association_with_transcript=0bp_to_ENST00000371836,ENST00000371838,ENST00000371839_5end | ||
|cluster_id=chr1:50489547..50489616,- | |||
|coexpression_cluster_id=C624 | |||
|description=CAGE_peak_1_at_AGBL4_5end | |description=CAGE_peak_1_at_AGBL4_5end | ||
|id=chr1:50489547..50489616,- | |id=chr1:50489547..50489616,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.32e-18;82!UBERON:0002532;2.06e-07;206!UBERON:0010316;2.06e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-61!115;UBERON:0001049!1.19e-55!57;UBERON:0005068!1.19e-55!57;UBERON:0006241!1.19e-55!57;UBERON:0007135!1.19e-55!57;UBERON:0001017!4.30e-51!82;UBERON:0000073!1.79e-49!94;UBERON:0001016!1.79e-49!94;UBERON:0005743!2.24e-49!86;UBERON:0002616!9.44e-47!59;UBERON:0003075!2.48e-46!86;UBERON:0007284!2.48e-46!86;UBERON:0002346!3.04e-46!90;UBERON:0000955!9.83e-45!69;UBERON:0006238!9.83e-45!69;UBERON:0003080!1.46e-42!42;UBERON:0002780!5.37e-42!41;UBERON:0001890!5.37e-42!41;UBERON:0006240!5.37e-42!41;UBERON:0001893!1.32e-34!34;UBERON:0002020!1.84e-34!34;UBERON:0003528!1.84e-34!34;UBERON:0002791!2.10e-33!33;UBERON:0001869!4.91e-33!32;UBERON:0003056!2.05e-32!61;UBERON:0000924!2.01e-27!173;UBERON:0006601!2.01e-27!173;UBERON:0004121!6.69e-27!169;UBERON:0002619!1.63e-26!22;UBERON:0000956!8.71e-26!25;UBERON:0000203!8.71e-26!25;UBERON:0000153!4.95e-25!129;UBERON:0007811!4.95e-25!129;UBERON:0000033!2.31e-24!123;UBERON:0001950!2.39e-24!20;UBERON:0000025!1.98e-14!194;UBERON:0003076!9.56e-14!15;UBERON:0003057!9.56e-14!15;UBERON:0004732!4.81e-12!13;UBERON:0004733!2.17e-11!12;UBERON:0002028!2.17e-11!12;UBERON:0007277!2.17e-11!12;UBERON:0004111!1.17e-10!241;UBERON:0002420!3.40e-10!9;UBERON:0007245!3.40e-10!9;UBERON:0010009!3.40e-10!9;UBERON:0010011!3.40e-10!9;UBERON:0000454!3.40e-10!9;UBERON:0000483!3.89e-10!309;UBERON:0000064!4.12e-10!219;UBERON:0002308!4.93e-10!9;UBERON:0000125!4.93e-10!9;UBERON:0001871!5.26e-10!7;UBERON:0000119!8.82e-10!312;UBERON:0000477!4.01e-09!286;UBERON:0000481!7.65e-09!347;UBERON:0002298!1.01e-08!8;UBERON:0001894!1.08e-08!7;UBERON:0006222!1.08e-08!7;UBERON:0000475!1.34e-08!365;UBERON:0000922!1.82e-08!612;UBERON:0000062!2.16e-08!511;UBERON:0002680!2.26e-08!9;UBERON:0001895!2.26e-08!9;UBERON:0010092!2.26e-08!9;UBERON:0000200!2.31e-08!6;UBERON:0009663!4.39e-08!7;UBERON:0002050!1.55e-07!605;UBERON:0005423!1.55e-07!605;UBERON:0000923!3.20e-07!604;UBERON:0005291!3.20e-07!604;UBERON:0006598!3.20e-07!604;UBERON:0002532!3.20e-07!604;UBERON:0000468!3.23e-07!659;UBERON:0001872!4.20e-07!5;UBERON:0000349!5.19e-07!5;UBERON:0002021!5.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.97e-40;41!UBERON:0001890;2.97e-40;41!UBERON:0001869;1.35e-38;32!UBERON:0001893;1.48e-38;34!UBERON:0003528;2.29e-38;34!UBERON:0002020;2.29e-38;34!UBERON:0002791;5.48e-38;32!UBERON:0002619;6.77e-38;22!UBERON:0000073;3.88e-36;53!UBERON:0002616;3.88e-36;53!UBERON:0001950;9.78e-35;20!UBERON:0000956;1.46e-32;25!UBERON:0000203;1.46e-32;25!UBERON:0000955;5.14e-25;68!UBERON:0001017;1.08e-24;75!UBERON:0001016;4.08e-23;83!UBERON:0007023;4.42e-18;114!UBERON:0002420;3.40e-14;9!UBERON:0007245;3.40e-14;9!UBERON:0010009;3.40e-14;9!UBERON:0010011;3.40e-14;9!UBERON:0000454;3.40e-14;9!UBERON:0000125;5.72e-14;9!UBERON:0002308;5.72e-14;9!UBERON:0001871;3.40e-12;6!UBERON:0001894;6.33e-12;7!UBERON:0000200;1.90e-11;6!UBERON:0009663;3.90e-11;7!UBERON:0004732;7.29e-11;13!UBERON:0002298;2.08e-10;6!UBERON:0011216;4.37e-10;132!UBERON:0004733;6.35e-10;12!UBERON:0002028;6.35e-10;12!UBERON:0001872;1.23e-09;5!UBERON:0000349;1.74e-09;5!UBERON:0002021;1.77e-09;5!UBERON:0003296;3.44e-08;4!UBERON:0010133;3.44e-08;4!UBERON:0000369;6.10e-08;4!UBERON:0002435;6.10e-08;4!UBERON:0000204;6.10e-08;4!UBERON:0002784;3.58e-07;4!UBERON:0010314;4.92e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.45e-68,56;UBERON:0005068,3.45e-68,56;UBERON:0006241,3.45e-68,56;UBERON:0007135,3.45e-68,56;UBERON:0000073,1.91e-64,53;UBERON:0002616,1.91e-64,53;UBERON:0007023,2.04e-63,114;UBERON:0001017,1.20e-59,81;UBERON:0001016,1.60e-57,89;UBERON:0002780,3.97e-56,41;UBERON:0001890,3.97e-56,41;UBERON:0003080,3.97e-56,41;UBERON:0006240,3.97e-56,41;UBERON:0000955,4.25e-55,68;UBERON:0006238,4.25e-55,68;UBERON:0002346,3.03e-51,86;UBERON:0003075,9.68e-51,82;UBERON:0007284,9.68e-51,82;UBERON:0001893,2.13e-45,34;UBERON:0003528,3.37e-45,34;UBERON:0002020,3.37e-45,34;UBERON:0001869,4.32e-43,32;UBERON:0002791,2.91e-42,32;UBERON:0010371,4.39e-41,104;UBERON:0003056,1.98e-39,61;UBERON:0002619,6.22e-38,22;UBERON:0001950,9.07e-35,20;UBERON:0010314,1.54e-33,132;UBERON:0000956,1.35e-32,25;UBERON:0000203,1.35e-32,25;UBERON:0004121,3.14e-30,171;UBERON:0000924,3.14e-30,171;UBERON:0006601,3.14e-30,171;UBERON:0011216,2.43e-27,223;UBERON:0000025,9.06e-20,192;UBERON:0002420,4.01e-14,9;UBERON:0007245,4.01e-14,9;UBERON:0010009,4.01e-14,9;UBERON:0010011,4.01e-14,9;UBERON:0000454,4.01e-14,9;UBERON:0004111,5.31e-14,240;UBERON:0000125,6.88e-14,9;UBERON:0002308,6.88e-14,9;UBERON:0003076,3.41e-13,15;UBERON:0003057,3.41e-13,15;UBERON:0001871,3.22e-12,6;UBERON:0001894,6.14e-12,7;UBERON:0006222,6.14e-12,7;UBERON:0000200,1.84e-11,6;UBERON:0009663,4.69e-11,7;UBERON:0004732,7.74e-11,13;UBERON:0000483,9.20e-11,306;UBERON:0000119,1.79e-10,309;UBERON:0002298,2.10e-10,6;UBERON:0004733,6.81e-10,12;UBERON:0002028,6.81e-10,12;UBERON:0007277,6.81e-10,12;UBERON:0001872,1.24e-09,5;UBERON:0000349,1.69e-09,5;UBERON:0002021,1.74e-09,5;UBERON:0003296,3.60e-08,4;UBERON:0010133,3.60e-08,4;UBERON:0000369,6.05e-08,4;UBERON:0002435,6.05e-08,4;UBERON:0000204,6.05e-08,4;UBERON:0010082,6.05e-08,4;UBERON:0000922,1.87e-07,592;UBERON:0002784,3.55e-07,4;UBERON:0002050,6.19e-07,564;UBERON:0005423,8.50e-07,581;UBERON:0000923,9.33e-07,560;UBERON:0010316,9.33e-07,560;UBERON:0005291,9.33e-07,560;UBERON:0006598,9.33e-07,560;UBERON:0010317,9.33e-07,560;UBERON:0002532,9.33e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0.313454721478088,0.85870796139317,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.221729397462564,0.087834785693126,17.8131542676889,0,0,0,0,0,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0.323745888736263,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.576479813667846,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,2.03275699377971,1.30139853857622,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,1.64865618636356,0,0.330037999682352,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,1.17206543417515,1.57768678274367,0,0,0,0,0,25.8478388419237,22.507106625682,0,0,1.68900326502395,2.78947183551498,1.38141957765574,0,0,0,0,0,0,0,0.295930216910801,0,0,22.29465316019,19.7596049084743,3.99227596002388,0,1.74919999992391,0.724999575434793,0.227586896570999,0,0,18.6161421550391,1.45802306691627,14.5844995743966,23.0292760311598,27.6165844452184,6.10326945268333,2.10100593869327,5.02430952221031,19.5253003467036,0,0,1.23120413606075,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,2.98578579323551,0.442287822516696,1.22206028986725,0.889563386041866,0.123563938946503,0.417687798021821,9.70576314921749,0,7.49646226321085,0,0,0,2.36750641709634,7.25944296291983,8.57003732565372,3.85438135733777,0.901940516486955,0,0,0,0,1.19472429772959,0,0,0,0,0,15.2012201370566,0,0,0,0,0.0969890164884194,0.529536760149002,6.55344148263544,0,0,42.5448548823505,7.43095254392251,0.320635281006135,1.28071796843612,0.39961921916426,4.7549837660855,0,25.3960596835708,0,0.621262677827163,0,0,0,0,0,4.80336230967832,3.28572909340783,0,0,0,4.74780082162832,1.14580212005842,0,0.199679000498991,0.429226048136571,0,1.74677028465488,0,0,0,0,0,0,0,29.4234985229442,18.7960700433974,0.160753148465019,0,0.415440338029185,0.899895566206002,0,47.8706506465234,0,2.52178263357434,4.82582210841983,0,0,0,3.57347663186684,0,0,0,0,0,0,0,0,0,0.146552233678082,0,13.5747104179628,13.223260174269,0,0,6.62081957919707,39.9298934953151,7.87054205159671,0.992332043623902,0,0,0,5.44017803369474,3.2589686222951,1.22538230705385,4.59021682993726,2.82697373250422,25.6959772190426,27.9440146625496,30.796968953799,27.5236413931234,16.1956415243804,13.2265338265147,0,0.124980407962107,0,0,0,9.36669811613763,12.3182874319201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4168559533808,1.36402216187572,0.265729680626726,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0.127894371303652,1.83302179374359,0.943595651135378,2.29340240203229,0,1.70059936081346,2.10690799240304,0,0,0,8.0057074828547,0,0,33.3349678250625,35.4241440813962,23.3065434223441,26.0497782585759,9.83079615264701,38.6589041274978,28.9041405681013,1.42769420259154,0,0,0,0,0,0,0,4.28698871590766,0,0.781514011233092,0,0,0,39.4419494171425,27.3377334514847,36.5835629807096,34.4347849352914,10.3925213713462,0,0,0,0,17.1424587481052,27.2389814997247,44.3084891092741,76.2668341026847,0.0887023701626388,0,0,16.7205543123006,35.5172977239385,0,0.333694205676207,1.88383422841234,20.5821422789963,0,4.56579360254748,0,0,12.8657779517981,6.00451724584361,0,0,0,0,0,0,0,0,0,0.423387050190929,8.2478472675858,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,1.87151570769685,0,2.97300226943921,0,0.549702583727146,5.28369952483357,0.154348316215889,0.218559560503957,32.4518934489451,0,0,4.3187862765288,1.48523200163543,7.1851473689178,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,1.37618785021362,1.14671666521161,0,32.5679238014481,10.0360658778287,4.2322147241232,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,8.71455029509753,37.2470140917088,4.97501663675268,7.13687671447077,4.90438158372256,13.5696725934332,0,0.186224142887574,0,4.64624255430604,11.5206797706185,0.435433495793923,0,0.26940821205835,11.3321084520429,2.993943208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| ||
|short_description=p1@AGBL4 | |short_description=p1@AGBL4 | ||
}} | }} |
Latest revision as of 10:43, 18 September 2015
Short description: | p1@AGBL4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AGBL4_5end |
Coexpression cluster: | C624_pituitary_cerebellum_occipital_parietal_middle_medial_hippocampus |
Association with transcript: | 0bp_to_ENST00000371836, ENST00000371838, ENST00000371839_5end |
EntrezGene: | AGBL4 |
HGNC: | 25892 |
UniProt: | B1ANV5B1AMW3Q5VU57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data