FFCP PHASE1:Hg19::chr1:50575553..50575567,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1996 | |EntrezGene=1996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3315 | |HGNC=3315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=65bp_to_ENST00000494555_5end | |association_with_transcript=65bp_to_ENST00000494555_5end | ||
|cluster_id=chr1:50575553..50575567,+ | |||
|coexpression_cluster_id=C2589 | |coexpression_cluster_id=C2589 | ||
|description=CAGE_peak_6_at_ELAVL4_5end | |description=CAGE_peak_6_at_ELAVL4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!5.86e-07!8 | |ontology_enrichment_celltype=CL:0000047!5.86e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0001014;3.36e-10;2!CL:0001016;3.36e-10;2!CL:0000047;9.31e-10;2 | |ontology_enrichment_celltype_v019=CL:0001014;3.36e-10;2!CL:0001016;3.36e-10;2!CL:0000047;9.31e-10;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.52e-10,2;CL:0001016,3.52e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.98e-12;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.98e-12;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@ELAVL4 | |short_description=p6@ELAVL4 | ||
}} | }} |
Latest revision as of 10:50, 18 September 2015
Short description: | p6@ELAVL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ELAVL4_5end |
Coexpression cluster: | C2589_neuroblastoma_occipital_small_medial_amygdala_frontal_parietal |
Association with transcript: | 65bp_to_ENST00000494555_5end |
EntrezGene: | ELAVL4 |
HGNC: | 3315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.52e-10 | 2 |
immature CD1a-positive Langerhans cell | 3.52e-10 | 2 |