FFCP PHASE1:Hg19::chr19:4559675..4559715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10501 | |EntrezGene=10501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10739 | |HGNC=10739 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3T3 | |UniProt=Q9H3T3 | ||
|association_with_transcript=55bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | |association_with_transcript=55bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | ||
|cluster_id=chr19:4559675..4559715,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_2_at_SEMA6B_5end | |description=CAGE_peak_2_at_SEMA6B_5end | ||
|id=chr19:4559675..4559715,- | |id=chr19:4559675..4559715,- | ||
|ontology_enrichment_celltype=CL:0000766!1.03e-26!76;CL:0002057!4.64e-26!42;CL:0000115!1.90e-24!35;CL:0002194!9.92e-24!63;CL:0000576!9.92e-24!63;CL:0000040!9.92e-24!63;CL:0000559!9.92e-24!63;CL:0002009!2.16e-23!65;CL:0000860!3.25e-23!45;CL:0002139!1.59e-21!24;CL:0000557!1.53e-20!71;CL:0000839!3.31e-20!70;CL:0002078!1.92e-17!44;CL:0000763!3.76e-17!112;CL:0000049!3.76e-17!112;CL:0000071!1.69e-16!18;CL:0002546!1.69e-16!18;CL:0000213!9.40e-12!57;CL:0000215!9.40e-12!57;CL:0000738!2.67e-10!140;CL:1000413!2.19e-09!9;CL:0002087!6.53e-08!119;CL:0000094!3.01e-07!8;CL:0000037!3.13e-07!172;CL:0000566!3.13e-07!172;CL:0002032!7.00e-07!165;CL:0000837!7.00e-07!165 | |ontology_enrichment_celltype=CL:0000766!1.03e-26!76;CL:0002057!4.64e-26!42;CL:0000115!1.90e-24!35;CL:0002194!9.92e-24!63;CL:0000576!9.92e-24!63;CL:0000040!9.92e-24!63;CL:0000559!9.92e-24!63;CL:0002009!2.16e-23!65;CL:0000860!3.25e-23!45;CL:0002139!1.59e-21!24;CL:0000557!1.53e-20!71;CL:0000839!3.31e-20!70;CL:0002078!1.92e-17!44;CL:0000763!3.76e-17!112;CL:0000049!3.76e-17!112;CL:0000071!1.69e-16!18;CL:0002546!1.69e-16!18;CL:0000213!9.40e-12!57;CL:0000215!9.40e-12!57;CL:0000738!2.67e-10!140;CL:1000413!2.19e-09!9;CL:0002087!6.53e-08!119;CL:0000094!3.01e-07!8;CL:0000037!3.13e-07!172;CL:0000566!3.13e-07!172;CL:0002032!7.00e-07!165;CL:0000837!7.00e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-29;33!CL:0002057;2.63e-29;33!CL:0000115;5.53e-27;36!CL:0002139;2.50e-26;24!CL:0000473;4.04e-26;39!CL:0000234;4.04e-26;39!CL:0000071;4.37e-20;18!CL:0000576;2.13e-18;48!CL:0002078;6.51e-15;45!CL:0000766;8.15e-14;69!CL:1000413;2.93e-11;9!CL:0000213;2.32e-09;58!CL:0000215;2.32e-09;58!CL:0000094;1.40e-08;8!CL:0002544;5.95e-08;6!CL:0002138;8.68e-08;6!CL:0002543;1.76e-07;6!CL:0000763;5.00e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.50e-31,36;CL:0000473,1.45e-30,48;CL:0000234,1.45e-30,48;CL:0000766,4.88e-29,72;CL:0000860,9.92e-28,42;CL:0002057,9.92e-28,42;CL:0002139,2.48e-26,24;CL:0002194,8.72e-26,59;CL:0000576,8.72e-26,59;CL:0000040,8.72e-26,59;CL:0000559,8.72e-26,59;CL:0002009,1.93e-24,61;CL:0002078,1.28e-22,45;CL:0000839,1.89e-21,66;CL:0000557,6.57e-21,67;CL:0000071,4.33e-20,18;CL:0002546,4.33e-20,18;CL:0000763,4.10e-15,108;CL:0000049,4.10e-15,108;CL:0000213,8.00e-15,58;CL:0000215,8.00e-15,58;CL:1000413,2.89e-11,9;CL:0000738,3.32e-09,136;CL:0000094,1.28e-08,8;CL:0002087,4.42e-08,115;CL:0002544,5.89e-08,6;CL:0005020,8.71e-08,6;CL:0002138,8.71e-08,6;CL:0005022,8.71e-08,6;CL:0002543,1.77e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.61e-21;42!CL:0002546;4.37e-20;18!CL:0005022;8.68e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-34!115;UBERON:0001049!1.36e-17!57;UBERON:0005068!1.36e-17!57;UBERON:0006241!1.36e-17!57;UBERON:0007135!1.36e-17!57;UBERON:0002405!1.81e-17!115;UBERON:0002193!3.49e-17!112;UBERON:0003081!1.12e-16!216;UBERON:0001986!1.69e-16!18;UBERON:0004638!1.69e-16!18;UBERON:0004852!1.69e-16!18;UBERON:0002371!4.08e-16!80;UBERON:0002616!5.77e-15!59;UBERON:0003080!1.94e-14!42;UBERON:0002780!5.64e-14!41;UBERON:0001890!5.64e-14!41;UBERON:0006240!5.64e-14!41;UBERON:0001474!9.52e-14!86;UBERON:0002390!1.16e-13!102;UBERON:0003061!1.16e-13!102;UBERON:0002020!1.15e-12!34;UBERON:0003528!1.15e-12!34;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0000025!2.85e-12!194;UBERON:0001017!2.95e-12!82;UBERON:0000487!4.17e-12!22;UBERON:0001893!4.22e-12!34;UBERON:0002791!9.01e-12!33;UBERON:0005743!1.38e-11!86;UBERON:0001869!3.62e-11!32;UBERON:0006914!1.18e-10!25;UBERON:0003075!1.27e-10!86;UBERON:0007284!1.27e-10!86;UBERON:0004111!1.45e-10!241;UBERON:0002619!7.97e-10!22;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101;UBERON:0000073!1.20e-09!94;UBERON:0001016!1.20e-09!94;UBERON:0002346!1.71e-09!90;UBERON:0003915!2.19e-09!9;UBERON:0004700!2.19e-09!9;UBERON:0001917!2.19e-09!9;UBERON:0001950!8.29e-09!20;UBERON:0000467!1.19e-08!625;UBERON:0000477!1.37e-08!286;UBERON:0000480!1.51e-08!626;UBERON:0000956!5.95e-08!25;UBERON:0000203!5.95e-08!25;UBERON:0000468!2.94e-07!659;UBERON:0003056!3.11e-07!61;UBERON:0000055!5.90e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.37e-20;18!UBERON:0001986;4.37e-20;18!UBERON:0004852;4.37e-20;18!UBERON:0000487;3.34e-15;22!UBERON:0006914;1.33e-12;25!UBERON:0003915;2.93e-11;9!UBERON:0004700;2.93e-11;9!UBERON:0001917;2.93e-11;9!UBERON:0000490;1.37e-07;33!UBERON:0007023;9.25e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.07e-28,114;UBERON:0003081,8.47e-21,203;UBERON:0004638,4.33e-20,18;UBERON:0001986,4.33e-20,18;UBERON:0004852,4.33e-20,18;UBERON:0002405,8.58e-20,93;UBERON:0002193,1.65e-17,108;UBERON:0002371,1.02e-16,76;UBERON:0000487,3.31e-15,22;UBERON:0001474,1.79e-14,82;UBERON:0002390,6.93e-14,98;UBERON:0003061,6.93e-14,98;UBERON:0006914,1.32e-12,25;UBERON:0000025,3.76e-12,192;UBERON:0004765,5.36e-12,90;UBERON:0003915,2.89e-11,9;UBERON:0004700,2.89e-11,9;UBERON:0001917,2.89e-11,9;UBERON:0001049,2.95e-11,56;UBERON:0005068,2.95e-11,56;UBERON:0006241,2.95e-11,56;UBERON:0007135,2.95e-11,56;UBERON:0004111,5.87e-11,240;UBERON:0000073,9.22e-10,53;UBERON:0002616,9.22e-10,53;UBERON:0000926,1.13e-09,315;UBERON:0004120,1.13e-09,315;UBERON:0006603,1.13e-09,315;UBERON:0001434,1.56e-09,100;UBERON:0000923,6.02e-09,560;UBERON:0010316,6.02e-09,560;UBERON:0005291,6.02e-09,560;UBERON:0006598,6.02e-09,560;UBERON:0010317,6.02e-09,560;UBERON:0002532,6.02e-09,560;UBERON:0002050,1.31e-08,564;UBERON:0000055,1.60e-08,68;UBERON:0001009,4.81e-08,112;UBERON:0005423,7.11e-08,581;UBERON:0002780,7.21e-08,41;UBERON:0001890,7.21e-08,41;UBERON:0003080,7.21e-08,41;UBERON:0006240,7.21e-08,41;UBERON:0000922,1.20e-07,592;UBERON:0003075,1.26e-07,82;UBERON:0007284,1.26e-07,82;UBERON:0003528,2.20e-07,34;UBERON:0002020,2.20e-07,34;UBERON:0004872,2.54e-07,83;UBERON:0001893,6.31e-07,34;UBERON:0002346,7.66e-07,86;UBERON:0004535,7.78e-07,109;UBERON:0000955,8.22e-07,68;UBERON:0006238,8.22e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0141997517693,6.52509976765262,10.9919447554414,0,0,0,0,0,0,5.53995408531877,13.2359335330294,9.11445657006578,8.73270349535705,7.44955431843653,9.78787157009909,180.148417847881,185.914964294894,169.081090647908,171.997487310207,201.883433018716,161.666725607244,279.924697729452,323.274811639725,165.064596462232,73.0860843161631,119.414666463008,74.484567626888,220.620021943933,277.818460758887,133.03630279149,168.040056911626,225.93403506157,127.867425159808,329.851300186716,331.907526282395,255.734850319616,81.8390052932607,133.335527802418,122.073160803133,218.083841442853,231.016932860149,142.258693281851,38.7455681685356,106.432236800406,76.583897760694,0.211255286311942,0.425208599930087,0,0.673971786878971,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92355994087075,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,2.81297636055767,0,0,0,0,0.486634870302636,0,0,0,2.03017567021455,0,0,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0,70.5606546151803,63.6573600378532,124.276299575519,47.4858671216168,120.815837628453,151.865159150917,81.9260268824298,90.7042824684344,97.8357222388453,110.457802212341,53.5762991755165,32.691700545896,50.0327217973747,86.4008238812791,110.989446859801,20.181738592202,14.594409220701,16.3286646700817,61.3266549863533,66.448596169769,58.6245580577303,63.2546003693104,34.9002237733493,0,0,0,0,0,0,0,1.06748995729705,0,0,6.87024427555409,4.41347138406339,0,0.576175924479999,0,0,11.409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,174.204687291417,22.4386838085513,0,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0,0,0,0,0,46.919095522349,40.7427251067417,28.5381228351897,0,0,2.46217006087397,0.702012795417713,1.78357394746474,0,0,0,0,0,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,3.4214489204541,0,0,0,1.56983518083505,0,0.5867062865676,0,3.57656445851882,5.917119267892,0,0,0,0,0,0,0,0,3.25736184293735,0,0,0,0,0,15.8110914833548,13.5609414686674,10.5416969741516,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.256686072559497,0.508189248444927,0,0,0.837581326671744,0,6.74106321552464,5.9832291840805,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,1.03384013061444,1.07857100409308,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,138.754728566494,85.3870400488109,34.3306306602402,260.644057046589,0,0,0,0,0,0,0,0,0,0,3.19427136107939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,3.01260162485693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78763425330917,1.2700414963433,0,0.561594356226918,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,14.5043097479175,0,0,0,0,0.593929361665277,0,2.98244294329889,5.90811548924153,0.111308705022906,0,0,2.39097585901284,1.93398740871803,0,0,0,0,0,0,0.511572370226872,4.63624006493588,2.3948309234694,0,0,4.63840490809256,1.99613798001194,0,0,2.89999830173917,0,0,0,0,0,0,5.31444831488303,4.34147179051469,0,4.53374965718021,0.591095237907095,0,0,0,2.6932590476329,0,0,0,0,1.27600463892768,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,2.83064206410685,1.22206028986725,0,0,0,1.07841812769083,5.61804353109152,0.234264445725339,0,0,0,0,2.41981432097328,0,9.47798694427319,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,1.84279131327997,0,1.80784592624426,0,0,0.316553979779393,0,0,1.92107695265417,0,0,0,0,0,0,0,0.135904206073614,0,0,0,4.80336230967832,8.48813349130357,0,0,0,3.35138881526705,2.29160424011684,46.6617465974929,6.98876501746469,8.58452096273142,8.9268582976749,2.48578848200887,0,0,0,0,0,0,0,2.38568906942791,6.1291532750209,0,0,0,0.899895566206002,0,0.546746009922222,0,1.97014268247995,1.25891011523995,0,0,0,7.86164859010704,3.97255182219259,0,0,0,0,0,0,0,0,2.93104467356165,2.65013777824443,6.20558190535443,8.72735171501754,0,0,2.66968531419237,1.88645166119599,5.79934677486074,8.93098839261511,0,0,0,1.08803560673895,3.7603484103405,0.919036730290385,2.62298104567844,0,5.31640907980192,3.17268288745104,5.00763722825999,6.30750115259078,5.65738162837947,2.48385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,4.70078682915885,0,0.265729680626726,0.490696182767533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,4.25089728976755,5.74681892605745,0.205116364240755,0.252071696221718,0.899044282034833,0,2.85538840518309,0,0,0,0,0,0,0,3.45967510406583,0,0.781514011233092,0,0,0,1.08060135389431,3.12431239445539,6.82066428453907,0.887821342714695,0.5469748090182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| ||
|short_description=p2@SEMA6B | |short_description=p2@SEMA6B | ||
}} | }} |
Latest revision as of 15:58, 18 September 2015
Short description: | p2@SEMA6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEMA6B_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 55bp_to_NM_032108, uc010dud.2, uc010xih.1_5end |
EntrezGene: | SEMA6B |
HGNC: | 10739 |
UniProt: | Q9H3T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.50e-31 | 36 |
defensive cell | 1.45e-30 | 48 |
phagocyte | 1.45e-30 | 48 |
myeloid leukocyte | 4.88e-29 | 72 |
classical monocyte | 9.92e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.92e-28 | 42 |
endothelial cell of vascular tree | 2.48e-26 | 24 |
monopoietic cell | 8.72e-26 | 59 |
monocyte | 8.72e-26 | 59 |
monoblast | 8.72e-26 | 59 |
promonocyte | 8.72e-26 | 59 |
macrophage dendritic cell progenitor | 1.93e-24 | 61 |
meso-epithelial cell | 1.28e-22 | 45 |
myeloid lineage restricted progenitor cell | 1.89e-21 | 66 |
granulocyte monocyte progenitor cell | 6.57e-21 | 67 |
blood vessel endothelial cell | 4.33e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.33e-20 | 18 |
myeloid cell | 4.10e-15 | 108 |
common myeloid progenitor | 4.10e-15 | 108 |
lining cell | 8.00e-15 | 58 |
barrier cell | 8.00e-15 | 58 |
endothelial cell of artery | 2.89e-11 | 9 |
leukocyte | 3.32e-09 | 136 |
granulocyte | 1.28e-08 | 8 |
nongranular leukocyte | 4.42e-08 | 115 |
aortic endothelial cell | 5.89e-08 | 6 |
lymphangioblast | 8.71e-08 | 6 |
endothelial cell of lymphatic vessel | 8.71e-08 | 6 |
vascular lymphangioblast | 8.71e-08 | 6 |
vein endothelial cell | 1.77e-07 | 6 |