FFCP PHASE1:Hg19::chr7:45039783..45039821,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:45039783..45039821,+ to FFCP PHASE1:Hg19::chr7:45039783..45039821,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83605 | |EntrezGene=83605 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21708 | |HGNC=21708 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSQ5,F5H551,F5H0E1 | |UniProt=Q9BSQ5,F5H551,F5H0E1 | ||
|association_with_transcript=0bp_to_ENST00000258781,ENST00000478582,ENST00000541586,ENST00000544363,NM_001167934,NM_001167935,NM_031443,uc003tmo.2,uc003tmp.2,uc003tmq.2,uc003tmr.2_5end | |||
|cluster_id=chr7:45039783..45039821,+ | |||
|description=CAGE_peak_2_at_CCM2_5end | |||
|id=chr7:45039783..45039821,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.84e-17!119;CL:0000183!5.87e-12!59;CL:0000220!5.93e-11!246;CL:0002321!2.53e-10!248;CL:0000680!1.27e-09!57;CL:0000056!1.27e-09!57;CL:0000355!1.27e-09!57;CL:0000187!1.40e-09!54;CL:0000192!3.61e-09!42;CL:0000514!3.61e-09!42;CL:0002078!6.89e-09!44;CL:0000393!8.61e-09!60;CL:0000211!8.61e-09!60;CL:0000055!1.03e-08!180;CL:0000115!4.62e-08!35;CL:0000359!5.22e-08!32;CL:0000213!5.02e-07!57;CL:0000215!5.02e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.41e-07;32!CL:0000115;3.01e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.75e-18,121;CL:0002321,9.71e-11,250;CL:0000680,9.95e-10,58;CL:0000056,9.95e-10,58;CL:0000355,9.95e-10,58;CL:0000187,1.10e-09,55;CL:0002078,2.38e-09,45;CL:0000192,2.90e-09,43;CL:0000514,2.90e-09,43;CL:0000393,6.71e-09,61;CL:0000211,6.71e-09,61;CL:0000115,1.55e-08,36;CL:0000359,5.22e-08,32;CL:0000213,2.05e-07,58;CL:0000215,2.05e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.77e-25!312;UBERON:0000483!8.78e-25!309;UBERON:0000025!2.67e-23!194;UBERON:0004111!2.15e-21!241;UBERON:0000475!4.99e-21!365;UBERON:0000477!2.27e-18!286;UBERON:0001049!1.95e-16!57;UBERON:0005068!1.95e-16!57;UBERON:0006241!1.95e-16!57;UBERON:0007135!1.95e-16!57;UBERON:0002616!2.06e-15!59;UBERON:0000955!5.27e-14!69;UBERON:0006238!5.27e-14!69;UBERON:0003075!1.01e-13!86;UBERON:0007284!1.01e-13!86;UBERON:0001017!3.82e-13!82;UBERON:0000481!7.80e-13!347;UBERON:0005256!1.17e-12!143;UBERON:0005743!1.80e-12!86;UBERON:0000073!3.23e-12!94;UBERON:0001016!3.23e-12!94;UBERON:0002346!4.50e-12!90;UBERON:0000914!5.75e-12!83;UBERON:0002329!5.75e-12!83;UBERON:0003077!5.75e-12!83;UBERON:0003059!5.75e-12!83;UBERON:0007282!5.75e-12!83;UBERON:0009618!5.75e-12!83;UBERON:0007285!5.75e-12!83;UBERON:0000033!8.90e-12!123;UBERON:0000064!9.85e-12!219;UBERON:0004121!3.05e-11!169;UBERON:0002049!4.23e-11!79;UBERON:0007798!4.23e-11!79;UBERON:0000486!5.03e-11!82;UBERON:0000153!6.96e-11!129;UBERON:0007811!6.96e-11!129;UBERON:0000055!9.86e-11!69;UBERON:0003914!1.64e-10!118;UBERON:0004290!2.55e-10!70;UBERON:0000924!2.91e-10!173;UBERON:0006601!2.91e-10!173;UBERON:0002100!3.32e-10!216;UBERON:0004872!4.17e-10!84;UBERON:0001134!4.97e-10!61;UBERON:0002036!4.97e-10!61;UBERON:0003082!4.97e-10!61;UBERON:0000480!6.01e-10!626;UBERON:0000467!6.85e-10!625;UBERON:0003080!8.33e-10!42;UBERON:0001981!8.75e-10!60;UBERON:0007500!8.75e-10!60;UBERON:0004537!8.75e-10!60;UBERON:0006965!8.75e-10!60;UBERON:0002020!9.27e-10!34;UBERON:0003528!9.27e-10!34;UBERON:0002780!1.10e-09!41;UBERON:0001890!1.10e-09!41;UBERON:0006240!1.10e-09!41;UBERON:0002385!1.19e-09!63;UBERON:0001015!1.19e-09!63;UBERON:0000383!1.19e-09!63;UBERON:0001893!3.89e-09!34;UBERON:0001869!4.87e-09!32;UBERON:0003056!6.21e-09!61;UBERON:0001637!1.00e-08!42;UBERON:0003509!1.00e-08!42;UBERON:0004572!1.00e-08!42;UBERON:0002791!1.03e-08!33;UBERON:0001009!1.12e-08!113;UBERON:0003076!1.27e-08!15;UBERON:0003057!1.27e-08!15;UBERON:0000468!1.29e-08!659;UBERON:0004535!2.86e-08!110;UBERON:0002050!4.29e-08!605;UBERON:0005423!4.29e-08!605;UBERON:0000923!4.90e-08!604;UBERON:0005291!4.90e-08!604;UBERON:0006598!4.90e-08!604;UBERON:0002532!4.90e-08!604;UBERON:0000956!6.32e-08!25;UBERON:0000203!6.32e-08!25;UBERON:0004732!6.61e-08!13;UBERON:0002619!1.05e-07!22;UBERON:0000490!1.13e-07!138;UBERON:0004733!2.06e-07!12;UBERON:0002028!2.06e-07!12;UBERON:0007277!2.06e-07!12;UBERON:0001950!3.37e-07!20;UBERON:0000922!3.59e-07!612;UBERON:0000353!6.86e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.10e-08;53!UBERON:0002616;1.10e-08;53!UBERON:0003528;1.87e-08;34!UBERON:0002020;1.87e-08;34!UBERON:0001869;3.82e-08;32!UBERON:0004732;7.18e-08;13!UBERON:0001893;7.98e-08;34!UBERON:0000956;8.19e-08;25!UBERON:0000203;8.19e-08;25!UBERON:0002791;8.47e-08;32!UBERON:0002619;1.15e-07;22!UBERON:0002780;2.19e-07;41!UBERON:0001890;2.19e-07;41!UBERON:0004733;2.21e-07;12!UBERON:0002028;2.21e-07;12!UBERON:0003914;2.27e-07;74!UBERON:0001950;3.79e-07;20!UBERON:0000353;4.54e-07;15 | |||
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 | ||
|short_description=p2@CCM2 | |||
}} | }} |
Latest revision as of 18:37, 18 September 2015
Short description: | p2@CCM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000258781, ENST00000478582, ENST00000541586, ENST00000544363, NM_001167934, NM_001167935, NM_031443, uc003tmo.2, uc003tmp.2, uc003tmq.2, uc003tmr.2_5end |
EntrezGene: | CCM2 |
HGNC: | 21708 |
UniProt: | Q9BSQ5F5H551F5H0E1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.75e-18 | 121 |
embryonic cell | 9.71e-11 | 250 |
muscle precursor cell | 9.95e-10 | 58 |
myoblast | 9.95e-10 | 58 |
multi-potent skeletal muscle stem cell | 9.95e-10 | 58 |
muscle cell | 1.10e-09 | 55 |
meso-epithelial cell | 2.38e-09 | 45 |
smooth muscle cell | 2.90e-09 | 43 |
smooth muscle myoblast | 2.90e-09 | 43 |
electrically responsive cell | 6.71e-09 | 61 |
electrically active cell | 6.71e-09 | 61 |
endothelial cell | 1.55e-08 | 36 |
vascular associated smooth muscle cell | 5.22e-08 | 32 |
lining cell | 2.05e-07 | 58 |
barrier cell | 2.05e-07 | 58 |