FFCP PHASE1:Hg19::chr6:43478037..43478048,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:43478037..43478048,-
|short_description=p3@LRRC73
|description=CAGE_peak_3_at_LRRC73_5end
|association_with_transcript=375bp_to_ENST00000372441,NM_00101297...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221424 | |EntrezGene=221424 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21375 | |HGNC=21375 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JTD7 | |UniProt=Q5JTD7 | ||
|association_with_transcript=375bp_to_ENST00000372441,NM_001012974,uc003ovk.1_5end | |||
|cluster_id=chr6:43478037..43478048,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_LRRC73_5end | |||
|id=chr6:43478037..43478048,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.28e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.35e-23!57;UBERON:0005068!5.35e-23!57;UBERON:0006241!5.35e-23!57;UBERON:0007135!5.35e-23!57;UBERON:0005743!9.24e-23!86;UBERON:0001017!9.90e-23!82;UBERON:0000073!3.67e-21!94;UBERON:0001016!3.67e-21!94;UBERON:0002780!4.96e-20!41;UBERON:0001890!4.96e-20!41;UBERON:0006240!4.96e-20!41;UBERON:0002346!9.57e-20!90;UBERON:0003075!1.32e-19!86;UBERON:0007284!1.32e-19!86;UBERON:0003080!4.24e-19!42;UBERON:0000955!7.33e-19!69;UBERON:0006238!7.33e-19!69;UBERON:0002616!2.02e-18!59;UBERON:0001869!4.09e-18!32;UBERON:0002020!1.02e-17!34;UBERON:0003528!1.02e-17!34;UBERON:0001893!1.12e-17!34;UBERON:0002791!6.25e-17!33;UBERON:0002619!1.63e-16!22;UBERON:0000956!3.03e-15!25;UBERON:0000203!3.03e-15!25;UBERON:0001950!6.53e-15!20;UBERON:0003056!2.27e-14!61;UBERON:0000924!3.63e-14!173;UBERON:0006601!3.63e-14!173;UBERON:0000033!5.99e-14!123;UBERON:0004121!7.60e-14!169;UBERON:0000153!2.32e-13!129;UBERON:0007811!2.32e-13!129;UBERON:0007023!1.25e-12!115;UBERON:0000025!1.14e-11!194;UBERON:0000475!3.09e-11!365;UBERON:0004111!8.08e-11!241;UBERON:0000477!6.39e-09!286;UBERON:0000483!4.50e-07!309;UBERON:0000481!4.92e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.31e-45;22!UBERON:0001893;1.57e-41;34!UBERON:0001869;1.77e-41;32!UBERON:0001950;1.09e-40;20!UBERON:0003528;1.88e-40;34!UBERON:0002020;1.88e-40;34!UBERON:0000956;1.41e-39;25!UBERON:0000203;1.41e-39;25!UBERON:0002791;2.05e-38;32!UBERON:0002780;4.80e-36;41!UBERON:0001890;4.80e-36;41!UBERON:0000073;3.08e-35;53!UBERON:0002616;3.08e-35;53!UBERON:0000955;1.41e-23;68!UBERON:0001017;1.75e-23;75!UBERON:0001016;2.54e-16;83!UBERON:0000200;1.03e-15;6!UBERON:0002298;4.46e-14;6!UBERON:0000349;9.86e-14;5!UBERON:0001871;3.29e-13;6!UBERON:0001872;1.23e-12;5!UBERON:0004733;1.83e-11;12!UBERON:0002028;1.83e-11;12!UBERON:0004732;1.82e-10;13!UBERON:0007023;3.29e-10;114!UBERON:0002420;1.09e-09;9!UBERON:0007245;1.09e-09;9!UBERON:0010009;1.09e-09;9!UBERON:0010011;1.09e-09;9!UBERON:0000454;1.09e-09;9!UBERON:0000125;2.31e-09;9!UBERON:0002308;2.31e-09;9!UBERON:0002021;8.10e-09;5!UBERON:0001870;8.38e-09;3!UBERON:0000988;4.31e-08;3!UBERON:0001896;1.16e-07;3!UBERON:0005290;1.16e-07;3!UBERON:0011216;3.62e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.66e-63,56;UBERON:0005068,1.66e-63,56;UBERON:0006241,1.66e-63,56;UBERON:0007135,1.66e-63,56;UBERON:0000073,8.91e-61,53;UBERON:0002616,8.91e-61,53;UBERON:0001017,6.00e-52,81;UBERON:0002780,3.14e-50,41;UBERON:0001890,3.14e-50,41;UBERON:0003080,3.14e-50,41;UBERON:0006240,3.14e-50,41;UBERON:0000955,1.21e-49,68;UBERON:0006238,1.21e-49,68;UBERON:0003528,4.29e-47,34;UBERON:0002020,4.29e-47,34;UBERON:0001893,5.57e-47,34;UBERON:0001869,8.12e-47,32;UBERON:0003075,3.02e-46,82;UBERON:0007284,3.02e-46,82;UBERON:0002346,1.29e-45,86;UBERON:0001016,1.55e-45,89;UBERON:0002619,1.63e-45,22;UBERON:0002791,6.26e-43,32;UBERON:0001950,1.42e-40,20;UBERON:0000956,1.71e-39,25;UBERON:0000203,1.71e-39,25;UBERON:0003056,3.97e-35,61;UBERON:0010371,7.49e-34,104;UBERON:0007023,1.31e-30,114;UBERON:0010314,6.41e-27,132;UBERON:0004121,3.05e-23,171;UBERON:0000924,3.05e-23,171;UBERON:0006601,3.05e-23,171;UBERON:0000025,1.89e-16,192;UBERON:0011216,8.70e-16,223;UBERON:0000200,1.05e-15,6;UBERON:0003076,4.90e-14,15;UBERON:0003057,4.90e-14,15;UBERON:0002298,5.43e-14,6;UBERON:0000349,9.01e-14,5;UBERON:0001871,3.09e-13,6;UBERON:0001872,1.60e-12,5;UBERON:0004733,1.58e-11,12;UBERON:0002028,1.58e-11,12;UBERON:0007277,1.58e-11,12;UBERON:0004111,2.20e-11,240;UBERON:0004732,1.59e-10,13;UBERON:0002420,1.14e-09,9;UBERON:0007245,1.14e-09,9;UBERON:0010009,1.14e-09,9;UBERON:0010011,1.14e-09,9;UBERON:0000454,1.14e-09,9;UBERON:0000125,2.31e-09,9;UBERON:0002308,2.31e-09,9;UBERON:0001870,7.92e-09,3;UBERON:0002021,9.00e-09,5;UBERON:0000988,3.85e-08,3;UBERON:0001896,1.58e-07,3;UBERON:0005290,1.58e-07,3;UBERON:0010096,1.58e-07,3;UBERON:0000483,2.20e-07,306;UBERON:0000119,3.35e-07,309 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.994192127183747,0.672325146451775,1.20538905604795,0,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,1.75996244461323,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0.670700859703636,0.12786256184353,0,0,0.434539556882471,0,0.486634870302636,0.189069634328136,0,0.175669571386252,1.44076983047484,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0,0.258416759169329,0,0.66944122552934,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,1.14734648299525,0.354668382198357,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0.448346041655403,0,0,0.140450806702248,0.204154171254893,0.245668634623536,0.619954687054593,1.18800285728205,0.741800787835671,0.910161361938026,0,0,0,0.277064115484183,0,0.30648779579902,0.600952235626387,0,0.358779271377724,0.213557388818567,0.423863802319124,0.600182192168805,0.515262646192195,0.515281080091258,0.37223371266318,0,0.0974370051611986,0.252433774244115,0.368199594569197,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.464775771478074,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,1.03993478527958,0,0.115930404975077,0.234817388471643,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,0,0,0.268675568108545,0,0.766765358330422,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0,0,3.57656445851882,0,0,0,0.257207374262142,1.41849132023278,0.799266537048298,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0,0.394061520403854,0.431255149719035,0.77005821767849,0.76228387266739,2.60279707715243,1.54657762555539,0.837581326671744,0,0,0,0,0.613457458595699,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,1.20378439891088,2.27407504055985,1.03473071292505,0.664225598535437,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0.232420756919918,0.120859449591622,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,0.524497659837696,0,0,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0,0.650756789328606,0.206082023295445,0,0.082509499920588,0,0,0,0.386682873168488,0,0.307007349452259,0,0,0,0.0852266274161009,0.0890320356467374,0,0.576570202095319,0,0.50578890427775,0,0.62962469366128,0,0,1.59691809095107,1.73986598415015,0.37064843820784,0.143124886741991,0,0,0,0,0.42793898803392,0.95460974377781,0.78494864019923,0.179872457583315,0,0,0.808729926293264,0,0,0,0,0,0.136499911407986,0.282810863907425,2.26016233240486,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0,0,0,0,0.35667105148125,1.06428319221179,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,1.92495971052672,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0.935702702041099,0.293016358543788,1.21360521749513,0,0.568272293612826,0.23874448473769,0.296964680832639,0,6.95903353436409,5.62677665642051,0.111308705022906,0,2.95575571379191,0.19924798825107,0,0,0,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,3.87733098438087,4.63840490809256,0,0.520855522170466,0.174919999992391,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0,0.868124974666461,0,2.77371808838438,0,1.65868889896837,2.95547618953547,5.26524953169534,0,0,0.0769502585037971,0.227884111694002,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,0,3.74823113160543,0,0.391329237864179,0.485560759068186,0,0,2.75465485467441,0.442306057399416,2.70582154946087,0.103688191397247,0,0,0,0,0.853828638089378,0,0.347119476670262,0.783939179315021,0.34823682632161,0,0,0,0.0730893170861856,0,0,0.441280633457501,0.677942222341597,0,0.397429223405979,7.78722790257308,0,0.480952921509202,0.640358984218058,0.19980960958213,0.144090417154106,0.572682980829578,1.54435498075768,0,0.124252535565433,0.235694034616795,0.135904206073614,0.523014231561666,0.203996435272644,0.577901179803038,1.20084057741958,0.684526894459965,0,0,0,0,0.687481272035051,0,0.19967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|short_description=p3@LRRC73 | |||
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Latest revision as of 22:22, 18 September 2015
Short description: | p3@LRRC73 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC73_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 375bp_to_ENST00000372441, NM_001012974, uc003ovk.1_5end |
EntrezGene: | LRRC73 |
HGNC: | 21375 |
UniProt: | Q5JTD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data