FFCP PHASE1:Hg19::chr7:50850549..50850614,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:50850549..50850614,- to FFCP PHASE1:Hg19::chr7:50850549..50850614,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2887 | |EntrezGene=2887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4564 | |HGNC=4564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483819_5end | |||
|cluster_id=chr7:50850549..50850614,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GRB10_5end | |||
|id=chr7:50850549..50850614,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;8.91e-08;6!CL:0000404;8.91e-08;6!CL:0002319;2.24e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.10e-10,8;CL:0000540,9.00e-08,6;CL:0000031,9.00e-08,6;CL:0000404,9.00e-08,6;CL:0002319,1.92e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.06e-14;82!CL:0000031;8.91e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.20e-45!86;UBERON:0001017!3.54e-43!82;UBERON:0003075!1.04e-42!86;UBERON:0007284!1.04e-42!86;UBERON:0002346!2.02e-41!90;UBERON:0000073!2.62e-41!94;UBERON:0001016!2.62e-41!94;UBERON:0001049!1.02e-40!57;UBERON:0005068!1.02e-40!57;UBERON:0006241!1.02e-40!57;UBERON:0007135!1.02e-40!57;UBERON:0007023!1.48e-40!115;UBERON:0002616!8.32e-35!59;UBERON:0000955!1.55e-34!69;UBERON:0006238!1.55e-34!69;UBERON:0003056!1.47e-33!61;UBERON:0002780!3.77e-32!41;UBERON:0001890!3.77e-32!41;UBERON:0006240!3.77e-32!41;UBERON:0003080!7.97e-31!42;UBERON:0001893!1.31e-26!34;UBERON:0002020!1.36e-26!34;UBERON:0003528!1.36e-26!34;UBERON:0002791!8.18e-26!33;UBERON:0000025!9.67e-26!194;UBERON:0004121!3.10e-25!169;UBERON:0001869!4.27e-25!32;UBERON:0000033!4.34e-25!123;UBERON:0000924!5.20e-25!173;UBERON:0006601!5.20e-25!173;UBERON:0000153!1.29e-24!129;UBERON:0007811!1.29e-24!129;UBERON:0004111!2.88e-24!241;UBERON:0000477!1.39e-22!286;UBERON:0000119!1.54e-22!312;UBERON:0000483!2.62e-22!309;UBERON:0000956!1.38e-19!25;UBERON:0000203!1.38e-19!25;UBERON:0002619!7.64e-18!22;UBERON:0000481!1.95e-17!347;UBERON:0000475!2.87e-17!365;UBERON:0001950!1.64e-16!20;UBERON:0000064!1.87e-14!219;UBERON:0000468!1.09e-11!659;UBERON:0003076!8.34e-11!15;UBERON:0003057!8.34e-11!15;UBERON:0000922!9.78e-11!612;UBERON:0000467!1.03e-09!625;UBERON:0000480!1.45e-09!626;UBERON:0004732!1.52e-09!13;UBERON:0004733!6.56e-09!12;UBERON:0002028!6.56e-09!12;UBERON:0007277!6.56e-09!12;UBERON:0000923!7.90e-09!604;UBERON:0005291!7.90e-09!604;UBERON:0006598!7.90e-09!604;UBERON:0002532!7.90e-09!604;UBERON:0002050!1.09e-08!605;UBERON:0005423!1.09e-08!605;UBERON:0002420!1.84e-08!9;UBERON:0007245!1.84e-08!9;UBERON:0010009!1.84e-08!9;UBERON:0010011!1.84e-08!9;UBERON:0000454!1.84e-08!9;UBERON:0002308!1.95e-08!9;UBERON:0000125!1.95e-08!9;UBERON:0001871!4.25e-07!7;UBERON:0009663!5.56e-07!7;UBERON:0000062!6.12e-07!511;UBERON:0001894!6.45e-07!7;UBERON:0006222!6.45e-07!7;UBERON:0002680!6.48e-07!9;UBERON:0001895!6.48e-07!9;UBERON:0010092!6.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.45e-39;41!UBERON:0001890;2.45e-39;41!UBERON:0001893;5.52e-39;34!UBERON:0003528;6.30e-39;34!UBERON:0002020;6.30e-39;34!UBERON:0002791;8.41e-39;32!UBERON:0001869;9.58e-39;32!UBERON:0000073;9.36e-38;53!UBERON:0002616;9.36e-38;53!UBERON:0000956;4.11e-33;25!UBERON:0000203;4.11e-33;25!UBERON:0002619;4.48e-30;22!UBERON:0001950;9.74e-28;20!UBERON:0000955;2.35e-26;68!UBERON:0001017;7.50e-26;75!UBERON:0001016;2.25e-23;83!UBERON:0007023;1.11e-15;114!UBERON:0004732;4.64e-14;13!UBERON:0002420;1.40e-13;9!UBERON:0007245;1.40e-13;9!UBERON:0010009;1.40e-13;9!UBERON:0010011;1.40e-13;9!UBERON:0000454;1.40e-13;9!UBERON:0000125;1.50e-13;9!UBERON:0002308;1.50e-13;9!UBERON:0004733;5.70e-13;12!UBERON:0002028;5.70e-13;12!UBERON:0009663;5.04e-11;7!UBERON:0001894;6.94e-11;7!UBERON:0001871;5.67e-10;6!UBERON:0002680;1.61e-09;9!UBERON:0001895;1.61e-09;9!UBERON:0000200;2.32e-09;6!UBERON:0002298;4.92e-09;6!UBERON:0011216;5.70e-09;132!UBERON:0010314;8.08e-09;132!UBERON:0001872;4.01e-08;5!UBERON:0001032;4.32e-08;24!UBERON:0004456;4.32e-08;24!UBERON:0000349;6.61e-08;5!UBERON:0002021;1.08e-07;5!UBERON:0002104;2.26e-07;21!UBERON:0000020;2.85e-07;23!UBERON:0000369;2.94e-07;4!UBERON:0002435;2.94e-07;4!UBERON:0000204;2.94e-07;4!UBERON:0003296;3.57e-07;4!UBERON:0010133;3.57e-07;4!UBERON:0002784;5.57e-07;4 | |||
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| ||
|short_description=p2@GRB10 | |||
}} | }} |
Latest revision as of 23:12, 18 September 2015
Short description: | p2@GRB10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GRB10_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000483819_5end |
EntrezGene: | GRB10 |
HGNC: | 4564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.10e-10 | 8 |
neuron | 9.00e-08 | 6 |
neuroblast | 9.00e-08 | 6 |
electrically signaling cell | 9.00e-08 | 6 |
neural cell | 1.92e-07 | 25 |