FFCP PHASE1:Hg19::chr5:80256513..80256530,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:80256513..80256530,+
|short_description=p5@RASGRF2
|description=CAGE_peak_5_at_RASGRF2_5end
|association_with_transcript=5bp_to_ENST00000503795,NM_006909_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5924 | |EntrezGene=5924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9876 | |HGNC=9876 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAS9,O14827 | |UniProt=D6RAS9,O14827 | ||
|association_with_transcript=5bp_to_ENST00000503795,NM_006909_5end | |||
|cluster_id=chr5:80256513..80256530,+ | |||
|description=CAGE_peak_5_at_RASGRF2_5end | |||
|id=chr5:80256513..80256530,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.35e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.38e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.35e-11;3!UBERON:0005425;2.54e-09;1!UBERON:0006601;7.30e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.76e-41!115;UBERON:0003075!1.07e-20!86;UBERON:0007284!1.07e-20!86;UBERON:0002346!5.15e-19!90;UBERON:0001049!3.37e-18!57;UBERON:0005068!3.37e-18!57;UBERON:0006241!3.37e-18!57;UBERON:0007135!3.37e-18!57;UBERON:0005743!7.41e-17!86;UBERON:0000073!1.52e-15!94;UBERON:0001016!1.52e-15!94;UBERON:0001017!2.82e-15!82;UBERON:0003056!1.82e-14!61;UBERON:0001893!9.24e-14!34;UBERON:0002780!1.04e-13!41;UBERON:0001890!1.04e-13!41;UBERON:0006240!1.04e-13!41;UBERON:0002616!2.01e-13!59;UBERON:0002020!2.85e-13!34;UBERON:0003528!2.85e-13!34;UBERON:0003080!3.55e-13!42;UBERON:0000153!5.84e-13!129;UBERON:0007811!5.84e-13!129;UBERON:0002791!7.96e-13!33;UBERON:0000033!2.62e-12!123;UBERON:0000955!3.70e-12!69;UBERON:0006238!3.70e-12!69;UBERON:0004121!4.63e-12!169;UBERON:0001869!5.22e-12!32;UBERON:0000924!2.42e-11!173;UBERON:0006601!2.42e-11!173;UBERON:0001950!3.29e-10!20;UBERON:0002619!3.94e-10!22;UBERON:0000956!2.56e-09!25;UBERON:0000203!2.56e-09!25;UBERON:0004111!1.52e-07!241;UBERON:0000477!1.78e-07!286;UBERON:0002298!3.90e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;2.14e-17;2!UBERON:0000122;2.14e-17;2!UBERON:0000200;1.53e-12;6!UBERON:0002298;1.53e-12;6!UBERON:0001896;1.35e-11;3!UBERON:0003124;1.35e-11;3!UBERON:0000920;1.35e-11;3!UBERON:0005290;1.35e-11;3!UBERON:0001893;8.30e-11;34!UBERON:0000073;3.98e-10;53!UBERON:0002616;3.98e-10;53!UBERON:0004732;5.10e-10;13!UBERON:0002336;8.29e-10;1!UBERON:0011215;8.29e-10;1!UBERON:0001018;8.29e-10;1!UBERON:0002473;8.29e-10;1!UBERON:0005340;8.29e-10;1!UBERON:0003544;8.29e-10;1!UBERON:0005970;8.29e-10;1!UBERON:0002316;8.29e-10;1!UBERON:0001020;8.29e-10;1!UBERON:0002437;8.29e-10;1!UBERON:0002581;2.54e-09;1!UBERON:0001882;2.54e-09;1!UBERON:0000941;2.54e-09;1!UBERON:0001785;2.54e-09;1!UBERON:0002464;2.54e-09;1!UBERON:0004904;2.54e-09;1!UBERON:0001021;2.54e-09;1!UBERON:0007190;2.54e-09;1!UBERON:0005403;2.54e-09;1!UBERON:0001017;2.87e-09;75!UBERON:0000955;2.74e-08;68!UBERON:0002780;4.58e-08;41!UBERON:0001890;4.58e-08;41!UBERON:0001869;4.72e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.42e-18,56;UBERON:0005068,5.42e-18,56;UBERON:0006241,5.42e-18,56;UBERON:0007135,5.42e-18,56;UBERON:0005162,1.76e-17,2;UBERON:0000122,1.76e-17,2;UBERON:0003075,2.97e-16,82;UBERON:0007284,2.97e-16,82;UBERON:0000073,5.64e-16,53;UBERON:0002616,5.64e-16,53;UBERON:0002346,2.16e-15,86;UBERON:0001016,1.68e-14,89;UBERON:0000955,2.35e-14,68;UBERON:0006238,2.35e-14,68;UBERON:0001017,5.98e-14,81;UBERON:0007023,4.63e-13,114;UBERON:0002298,1.16e-12,6;UBERON:0010371,2.51e-12,104;UBERON:0000200,2.57e-12,6;UBERON:0000920,6.38e-12,3;UBERON:0001896,9.83e-12,3;UBERON:0005290,9.83e-12,3;UBERON:0010096,9.83e-12,3;UBERON:0003056,3.26e-11,61;UBERON:0002780,4.77e-11,41;UBERON:0001890,4.77e-11,41;UBERON:0003080,4.77e-11,41;UBERON:0006240,4.77e-11,41;UBERON:0010314,9.95e-11,132;UBERON:0001893,2.75e-10,34;UBERON:0004732,4.03e-10,13;UBERON:0002336,8.68e-10,1;UBERON:0011215,8.68e-10,1;UBERON:0001018,8.68e-10,1;UBERON:0002473,8.68e-10,1;UBERON:0005340,8.68e-10,1;UBERON:0003544,8.68e-10,1;UBERON:0005970,8.68e-10,1;UBERON:0002316,8.68e-10,1;UBERON:0001020,8.68e-10,1;UBERON:0002437,8.68e-10,1;UBERON:0000941,1.99e-09,1;UBERON:0001785,1.99e-09,1;UBERON:0002464,1.99e-09,1;UBERON:0004904,1.99e-09,1;UBERON:0001021,1.99e-09,1;UBERON:0003902,1.99e-09,1;UBERON:0005425,1.99e-09,1;UBERON:0007190,2.55e-09,1;UBERON:0002581,4.87e-09,1;UBERON:0001882,5.72e-09,1;UBERON:0005403,5.72e-09,1;UBERON:0003076,9.36e-09,15;UBERON:0003057,9.36e-09,15;UBERON:0001869,4.56e-08,32;UBERON:0004121,1.30e-07,171;UBERON:0000924,1.30e-07,171;UBERON:0006601,1.30e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0.328875809207352,0.552700035571697,0.579606171470105,0,1.07016331235885,1.04535523804977,0.339928028092699,0.383220493601921,0,0.506039384039006,0,0.651083453856419,0,0.602300476311091,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0.937285727335186,0,0,0.149448680551801,0,0,0,0.204154171254893,0.368502951935304,0.309977343527296,0,0.247266929278557,0,0,0,0.500474079487857,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.977424915930974,0,0,0,0.587043471179108,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0.68888668898764,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0.616067160352178,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0.47748896947538,0,0,0.994147647766298,0.140669416410513,0,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0,0,0,0.394573622547734,0,0,3.87733098438087,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.438770794307945,0,0,0.461701551022782,0,0,1.6156375993759,0,1.91400695839152,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,3.10045211711114,0,0.468528891450678,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0,0.411125773940253,0,0.949661939338181,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0.858452096273142,0.669514372325618,0.134366944973453,0,0,0.0787831823072236,0.164831716762333,0.337017719270924,0,0,0,0.272406812223151,0.160753148465019,0.275078873194468,0,0,0,0.668245123238271,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,1.63205341010842,0.7520696820681,0.306345576763462,0.655745261419609,0,0.886068179966986,1.09823638411767,0.500763722825999,1.14681839138014,0.443716206147409,1.92498849118289,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0.6124909547064,1.02766760154335,1.41696576325585,0.638535436228605,0.615349092722265,0,0.414943514785307,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,1.35075169236789,0.781078098613847,0,0.697573912132975,0,0,0.496211178389294,0,0,2.14280734351315,0,0,0,0.0887023701626388,0,0,1.35939465953663,1.05236437700559,0,0,0.235479278551542,0.157115589916002,0.840816489941367,0.913158720509496,0,0,1.21510125100316,0,0,0.347716544605159,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.410651227424988,2.3196288626764,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.245148321753905,0,0.981542335574726,0.594092800654172,1.2679671827502,0,0.187967835959707,0.0644578879735772,0,0,0,0.160482733378337,0,0.458729283404541,0.573358332605805,0,1.08786384305464,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.18378979906969,0,0.0757786982182394,0.267964130156178,0,0.310298987585686,0.426467963801962,0.23806443146374,0,0,0,0.0636471582781649,1.21270313374932,0.653150243690884,0,0.202056159043763,0.215166616178029,0,0,0,0,0.269475606319761,0,0.24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| ||
|short_description=p5@RASGRF2 | |||
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Latest revision as of 23:19, 18 September 2015
Short description: | p5@RASGRF2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RASGRF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000503795, NM_006909_5end |
EntrezGene: | RASGRF2 |
HGNC: | 9876 |
UniProt: | D6RAS9O14827 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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chorionic membrane mesenchymal stem cell | 6.38e-12 | 3 |