FFCP PHASE1:Hg19::chr10:71211212..71211288,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:71211212..71211288,+ to FFCP PHASE1:Hg19::chr10:71211212..71211288,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23555 | |EntrezGene=23555 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23298 | |HGNC=23298 | ||
|TSSclassifier=strong | |||
|UniProt=O95858 | |UniProt=O95858 | ||
|association_with_transcript=0bp_to_ENST00000373290,ENST00000478112,NM_012339,uc001jpo.1_5end | |||
|cluster_id=chr10:71211212..71211288,+ | |||
|description=CAGE_peak_1_at_TSPAN15_5end | |||
|id=chr10:71211212..71211288,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.65e-19!254;CL:0000115!1.35e-13!35;CL:0002078!1.02e-12!44;CL:0002139!4.22e-11!24;CL:0000213!2.36e-09!57;CL:0000215!2.36e-09!57;CL:0000071!1.69e-07!18;CL:0002546!1.69e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.31e-12;36!CL:0002139;2.80e-11;24!CL:0002078;6.05e-09;45!CL:1000497;1.07e-07;17!CL:0002518;1.07e-07;17!CL:1000449;1.12e-07;15!CL:0000071;1.35e-07;18!CL:0002681;9.50e-07;12!CL:0002584;9.50e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.50e-20,253;CL:0000115,3.08e-14,36;CL:0002078,1.88e-13,45;CL:0002139,2.56e-11,24;CL:0000213,4.95e-10,58;CL:0000215,4.95e-10,58;CL:1000497,1.12e-07,17;CL:0002518,1.12e-07,17;CL:1000449,1.14e-07,15;CL:0000071,1.24e-07,18;CL:0002546,1.24e-07,18;CL:0002681,9.74e-07,12;CL:0002584,9.74e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;1.35e-07;18 | |||
|ontology_enrichment_disease=DOID:305!2.19e-12!106;DOID:0050687!3.62e-09!143;DOID:299!8.63e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;6.36e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.34e-12,106;DOID:0050687,1.07e-08,143;DOID:299,6.22e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.62e-24!115;UBERON:0004111!1.03e-16!241;UBERON:0001049!1.07e-16!57;UBERON:0005068!1.07e-16!57;UBERON:0006241!1.07e-16!57;UBERON:0007135!1.07e-16!57;UBERON:0000064!7.07e-16!219;UBERON:0005743!7.66e-15!86;UBERON:0003075!4.28e-14!86;UBERON:0007284!4.28e-14!86;UBERON:0000955!9.13e-14!69;UBERON:0006238!9.13e-14!69;UBERON:0001017!9.27e-14!82;UBERON:0000025!1.16e-13!194;UBERON:0000073!1.17e-13!94;UBERON:0001016!1.17e-13!94;UBERON:0002346!5.53e-13!90;UBERON:0002616!1.40e-12!59;UBERON:0000477!2.72e-12!286;UBERON:0003080!1.64e-11!42;UBERON:0002780!4.92e-11!41;UBERON:0001890!4.92e-11!41;UBERON:0006240!4.92e-11!41;UBERON:0000483!1.32e-10!309;UBERON:0000119!2.88e-10!312;UBERON:0000033!7.51e-10!123;UBERON:0000153!9.89e-10!129;UBERON:0007811!9.89e-10!129;UBERON:0003056!1.23e-09!61;UBERON:0001893!1.73e-09!34;UBERON:0002020!1.85e-09!34;UBERON:0003528!1.85e-09!34;UBERON:0005177!3.15e-09!107;UBERON:0002791!3.82e-09!33;UBERON:0000464!1.61e-08!104;UBERON:0000475!1.96e-08!365;UBERON:0001869!2.00e-08!32;UBERON:0004121!2.01e-08!169;UBERON:0000481!2.45e-08!347;UBERON:0000468!3.56e-08!659;UBERON:0009569!4.67e-08!113;UBERON:0000466!4.79e-08!126;UBERON:0000924!6.03e-08!173;UBERON:0006601!6.03e-08!173;UBERON:0003887!7.86e-08!21;UBERON:0000489!1.19e-07!32;UBERON:0001986!1.69e-07!18;UBERON:0004638!1.69e-07!18;UBERON:0004852!1.69e-07!18;UBERON:0000922!3.61e-07!612;UBERON:0000480!5.03e-07!626;UBERON:0000467!5.13e-07!625;UBERON:0000062!5.17e-07!511;UBERON:0000080!7.70e-07!18;UBERON:0002120!7.70e-07!18;UBERON:0004875!7.70e-07!18;UBERON:0005721!7.70e-07!18;UBERON:0005754!7.70e-07!18;UBERON:0007297!7.70e-07!18;UBERON:0000058!9.36e-07!26;UBERON:0004921!9.53e-07!129;UBERON:0004185!9.53e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.84e-09;53!UBERON:0002616;7.84e-09;53!UBERON:0002780;1.98e-08;41!UBERON:0001890;1.98e-08;41!UBERON:0001893;2.03e-08;34!UBERON:0003528;3.67e-08;34!UBERON:0002020;3.67e-08;34!UBERON:0000489;5.58e-08;29!UBERON:0002791;6.92e-08;32!UBERON:0001869;8.54e-08;32!UBERON:0006555;1.12e-07;15!UBERON:0004819;1.12e-07;15!UBERON:0001285;1.12e-07;15!UBERON:0007684;1.12e-07;15!UBERON:0007023;1.33e-07;114!UBERON:0004638;1.35e-07;18!UBERON:0001986;1.35e-07;18!UBERON:0004852;1.35e-07;18!UBERON:0000490;3.81e-07;33!UBERON:0000487;7.71e-07;22!UBERON:0000353;9.18e-07;15!UBERON:0001225;9.50e-07;12!UBERON:0008987;9.50e-07;12!UBERON:0006554;9.81e-07;30!UBERON:0001008;9.81e-07;30 | |||
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| ||
|short_description=p1@TSPAN15 | |||
}} | }} |
Latest revision as of 01:06, 19 September 2015
Short description: | p1@TSPAN15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSPAN15_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373290, ENST00000478112, NM_012339, uc001jpo.1_5end |
EntrezGene: | TSPAN15 |
HGNC: | 23298 |
UniProt: | O95858 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.50e-20 | 253 |
endothelial cell | 3.08e-14 | 36 |
meso-epithelial cell | 1.88e-13 | 45 |
endothelial cell of vascular tree | 2.56e-11 | 24 |
lining cell | 4.95e-10 | 58 |
barrier cell | 4.95e-10 | 58 |
kidney cell | 1.12e-07 | 17 |
kidney epithelial cell | 1.12e-07 | 17 |
epithelial cell of nephron | 1.14e-07 | 15 |
blood vessel endothelial cell | 1.24e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.24e-07 | 18 |
kidney cortical cell | 9.74e-07 | 12 |
renal cortical epithelial cell | 9.74e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.34e-12 | 106 |
cell type cancer | 1.07e-08 | 143 |
adenocarcinoma | 6.22e-08 | 25 |