FFCP PHASE1:Hg19::chr4:86396549..86396593,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000506421_5end | |association_with_transcript=-2bp_to_ENST00000506421_5end | ||
|cluster_id=chr4:86396549..86396593,+ | |||
|coexpression_cluster_id=C179 | |coexpression_cluster_id=C179 | ||
|description=CAGE_peak_3_at_ARHGAP24_5end | |description=CAGE_peak_3_at_ARHGAP24_5end | ||
|id=chr4:86396549..86396593,+ | |id=chr4:86396549..86396593,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.13e-30!140;CL:0002087!1.31e-30!119;CL:0002031!1.39e-26!124;CL:0002009!1.27e-25!65;CL:0002057!1.08e-24!42;CL:0002194!1.73e-24!63;CL:0000576!1.73e-24!63;CL:0000040!1.73e-24!63;CL:0000559!1.73e-24!63;CL:0000766!3.25e-23!76;CL:0000037!9.94e-23!172;CL:0000566!9.94e-23!172;CL:0000557!1.18e-22!71;CL:0000988!6.29e-22!182;CL:0000860!1.90e-21!45;CL:0000839!7.67e-21!70;CL:0002032!1.24e-20!165;CL:0000837!1.24e-20!165;CL:0000763!4.97e-14!112;CL:0000049!4.97e-14!112;CL:0000945!3.24e-13!24;CL:0000826!3.24e-13!24;CL:0000236!1.24e-09!14 | |ontology_enrichment_celltype=CL:0000738!1.13e-30!140;CL:0002087!1.31e-30!119;CL:0002031!1.39e-26!124;CL:0002009!1.27e-25!65;CL:0002057!1.08e-24!42;CL:0002194!1.73e-24!63;CL:0000576!1.73e-24!63;CL:0000040!1.73e-24!63;CL:0000559!1.73e-24!63;CL:0000766!3.25e-23!76;CL:0000037!9.94e-23!172;CL:0000566!9.94e-23!172;CL:0000557!1.18e-22!71;CL:0000988!6.29e-22!182;CL:0000860!1.90e-21!45;CL:0000839!7.67e-21!70;CL:0002032!1.24e-20!165;CL:0000837!1.24e-20!165;CL:0000763!4.97e-14!112;CL:0000049!4.97e-14!112;CL:0000945!3.24e-13!24;CL:0000826!3.24e-13!24;CL:0000236!1.24e-09!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.14e-25;33!CL:0002057;7.14e-25;33!CL:0000473;6.43e-24;39!CL:0000234;6.43e-24;39!CL:0000576;4.54e-22;48!CL:0000945;7.86e-19;24!CL:0000766;5.10e-15;69!CL:0002087;3.19e-13;104!CL:0000236;6.19e-13;13!CL:0000738;6.11e-09;136!CL:0000763;9.05e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.27e-39,115;CL:0000738,7.25e-39,136;CL:0000473,4.70e-38,48;CL:0000234,4.70e-38,48;CL:0002009,2.26e-35,61;CL:0000860,2.42e-34,42;CL:0002057,2.42e-34,42;CL:0002194,9.43e-34,59;CL:0000576,9.43e-34,59;CL:0000040,9.43e-34,59;CL:0000559,9.43e-34,59;CL:0002031,1.40e-33,120;CL:0000766,1.76e-30,72;CL:0000557,2.45e-30,67;CL:0000839,4.67e-28,66;CL:0000988,1.80e-27,177;CL:0000037,1.84e-27,168;CL:0002032,7.70e-25,161;CL:0000837,7.70e-25,161;CL:0000945,7.45e-19,24;CL:0000826,7.45e-19,24;CL:0000763,1.80e-17,108;CL:0000049,1.80e-17,108;CL:0000236,2.04e-13,14;CL:0002393,1.83e-08,9;CL:0002397,1.83e-08,9;CL:0000542,2.90e-07,53;CL:0000051,2.90e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-24;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.48e-35!115;UBERON:0002193!1.28e-28!112;UBERON:0002390!8.60e-28!102;UBERON:0003061!8.60e-28!102;UBERON:0002371!9.82e-20!80;UBERON:0001474!2.66e-16!86;UBERON:0002405!2.19e-15!115;UBERON:0001049!1.00e-13!57;UBERON:0005068!1.00e-13!57;UBERON:0006241!1.00e-13!57;UBERON:0007135!1.00e-13!57;UBERON:0004765!5.97e-13!101;UBERON:0001434!5.97e-13!101;UBERON:0002616!7.98e-11!59;UBERON:0003080!2.98e-10!42;UBERON:0002780!5.78e-10!41;UBERON:0001890!5.78e-10!41;UBERON:0006240!5.78e-10!41;UBERON:0000178!7.60e-10!15;UBERON:0000179!7.60e-10!15;UBERON:0000463!7.60e-10!15;UBERON:0001893!1.81e-08!34;UBERON:0002020!1.82e-08!34;UBERON:0003528!1.82e-08!34;UBERON:0000955!2.55e-08!69;UBERON:0006238!2.55e-08!69;UBERON:0002204!3.94e-08!167;UBERON:0002791!4.01e-08!33;UBERON:0003075!6.23e-08!86;UBERON:0007284!6.23e-08!86;UBERON:0001017!1.28e-07!82;UBERON:0001869!1.82e-07!32;UBERON:0005743!5.58e-07!86;UBERON:0003081!7.24e-07!216;UBERON:0002346!9.11e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!3.48e-35!115;UBERON:0002193!1.28e-28!112;UBERON:0002390!8.60e-28!102;UBERON:0003061!8.60e-28!102;UBERON:0002371!9.82e-20!80;UBERON:0001474!2.66e-16!86;UBERON:0002405!2.19e-15!115;UBERON:0001049!1.00e-13!57;UBERON:0005068!1.00e-13!57;UBERON:0006241!1.00e-13!57;UBERON:0007135!1.00e-13!57;UBERON:0004765!5.97e-13!101;UBERON:0001434!5.97e-13!101;UBERON:0002616!7.98e-11!59;UBERON:0003080!2.98e-10!42;UBERON:0002780!5.78e-10!41;UBERON:0001890!5.78e-10!41;UBERON:0006240!5.78e-10!41;UBERON:0000178!7.60e-10!15;UBERON:0000179!7.60e-10!15;UBERON:0000463!7.60e-10!15;UBERON:0001893!1.81e-08!34;UBERON:0002020!1.82e-08!34;UBERON:0003528!1.82e-08!34;UBERON:0000955!2.55e-08!69;UBERON:0006238!2.55e-08!69;UBERON:0002204!3.94e-08!167;UBERON:0002791!4.01e-08!33;UBERON:0003075!6.23e-08!86;UBERON:0007284!6.23e-08!86;UBERON:0001017!1.28e-07!82;UBERON:0001869!1.82e-07!32;UBERON:0005743!5.58e-07!86;UBERON:0003081!7.24e-07!216;UBERON:0002346!9.11e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.68e-13;15!UBERON:0000179;2.68e-13;15!UBERON:0000463;2.68e-13;15!UBERON:0007023;1.78e-11;114!UBERON:0000073;2.47e-09;53!UBERON:0002616;2.47e-09;53!UBERON:0002780;2.76e-09;41!UBERON:0001890;2.76e-09;41!UBERON:0001893;4.48e-09;34!UBERON:0003528;9.43e-09;34!UBERON:0002020;9.43e-09;34!UBERON:0002791;1.25e-08;32!UBERON:0001869;3.03e-08;32!UBERON:0000125;1.70e-07;9!UBERON:0002308;1.70e-07;9!UBERON:0002390;1.92e-07;32!UBERON:0002420;2.35e-07;9!UBERON:0007245;2.35e-07;9!UBERON:0010009;2.35e-07;9!UBERON:0010011;2.35e-07;9!UBERON:0000454;2.35e-07;9!UBERON:0002619;4.36e-07;22 | |||
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| ||
|short_description=p3@ARHGAP24 | |short_description=p3@ARHGAP24 | ||
}} | }} |
Latest revision as of 03:24, 19 September 2015
Short description: | p3@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGAP24_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -2bp_to_ENST00000506421_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.27e-39 | 115 |
leukocyte | 7.25e-39 | 136 |
defensive cell | 4.70e-38 | 48 |
phagocyte | 4.70e-38 | 48 |
macrophage dendritic cell progenitor | 2.26e-35 | 61 |
classical monocyte | 2.42e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-34 | 42 |
monopoietic cell | 9.43e-34 | 59 |
monocyte | 9.43e-34 | 59 |
monoblast | 9.43e-34 | 59 |
promonocyte | 9.43e-34 | 59 |
hematopoietic lineage restricted progenitor cell | 1.40e-33 | 120 |
myeloid leukocyte | 1.76e-30 | 72 |
granulocyte monocyte progenitor cell | 2.45e-30 | 67 |
myeloid lineage restricted progenitor cell | 4.67e-28 | 66 |
hematopoietic cell | 1.80e-27 | 177 |
hematopoietic stem cell | 1.84e-27 | 168 |
hematopoietic oligopotent progenitor cell | 7.70e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.70e-25 | 161 |
lymphocyte of B lineage | 7.45e-19 | 24 |
pro-B cell | 7.45e-19 | 24 |
myeloid cell | 1.80e-17 | 108 |
common myeloid progenitor | 1.80e-17 | 108 |
B cell | 2.04e-13 | 14 |
intermediate monocyte | 1.83e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.83e-08 | 9 |
lymphocyte | 2.90e-07 | 53 |
common lymphoid progenitor | 2.90e-07 | 53 |