FFCP PHASE1:Hg19::chr17:2496971..2496983,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:2496971..2496983,+ to FFCP PHASE1:Hg19::chr17:2496971..2496983,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5048 | |EntrezGene=5048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8574 | |HGNC=8574 | ||
|TSSclassifier=strong | |||
|UniProt=P43034 | |UniProt=P43034 | ||
|association_with_transcript=48bp_to_ENST00000397195,NM_000430,uc002fuw.3,uc010ckb.1_5end | |||
|cluster_id=chr17:2496971..2496983,+ | |||
|description=CAGE_peak_4_at_PAFAH1B1_5end | |||
|id=chr17:2496971..2496983,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.60e-14!42;CL:0000860!6.84e-14!45;CL:0000766!6.93e-09!76;CL:0000557!4.67e-08!71;CL:0000839!1.75e-07!70;CL:0002009!2.84e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.18e-14;33!CL:0002057;5.18e-14;33!CL:0000473;7.47e-08;39!CL:0000234;7.47e-08;39!CL:0000576;3.51e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.47e-14,42;CL:0002057,6.47e-14,42;CL:0000473,1.14e-09,48;CL:0000234,1.14e-09,48;CL:0000766,3.73e-09,72;CL:0000557,3.65e-08,67;CL:0000839,1.45e-07,66;CL:0002009,1.64e-07,61;CL:0002194,9.72e-07,59;CL:0000576,9.72e-07,59;CL:0000040,9.72e-07,59;CL:0000559,9.72e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;6.62e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.43e-22!57;UBERON:0005068!7.43e-22!57;UBERON:0006241!7.43e-22!57;UBERON:0007135!7.43e-22!57;UBERON:0001017!9.91e-21!82;UBERON:0002616!1.22e-20!59;UBERON:0000955!2.31e-19!69;UBERON:0006238!2.31e-19!69;UBERON:0005743!4.05e-19!86;UBERON:0002780!1.58e-18!41;UBERON:0001890!1.58e-18!41;UBERON:0006240!1.58e-18!41;UBERON:0003080!3.28e-17!42;UBERON:0003075!3.55e-16!86;UBERON:0007284!3.55e-16!86;UBERON:0000073!4.79e-16!94;UBERON:0001016!4.79e-16!94;UBERON:0002020!1.12e-15!34;UBERON:0003528!1.12e-15!34;UBERON:0001893!1.58e-15!34;UBERON:0002791!6.26e-15!33;UBERON:0001869!1.16e-14!32;UBERON:0002346!4.86e-14!90;UBERON:0007023!2.54e-12!115;UBERON:0000033!3.21e-12!123;UBERON:0002619!4.73e-12!22;UBERON:0000153!5.21e-12!129;UBERON:0007811!5.21e-12!129;UBERON:0004121!1.21e-11!169;UBERON:0000956!3.15e-11!25;UBERON:0000203!3.15e-11!25;UBERON:0001950!4.29e-11!20;UBERON:0003056!5.02e-11!61;UBERON:0000924!1.84e-10!173;UBERON:0006601!1.84e-10!173;UBERON:0000025!2.88e-09!194;UBERON:0000467!1.52e-08!625;UBERON:0000480!1.97e-08!626;UBERON:0000062!2.88e-08!511;UBERON:0002204!4.32e-08!167;UBERON:0000468!1.05e-07!659;UBERON:0002371!5.16e-07!80;UBERON:0004111!7.18e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.46e-15;34!UBERON:0002780;7.06e-15;41!UBERON:0001890;7.06e-15;41!UBERON:0003528;7.78e-15;34!UBERON:0002020;7.78e-15;34!UBERON:0001869;1.26e-14;32!UBERON:0002791;1.61e-14;32!UBERON:0000073;3.82e-14;53!UBERON:0002616;3.82e-14;53!UBERON:0002619;5.39e-13;22!UBERON:0000956;1.35e-12;25!UBERON:0000203;1.35e-12;25!UBERON:0001950;4.94e-12;20!UBERON:0001017;1.51e-10;75!UBERON:0000955;2.84e-10;68!UBERON:0001016;3.75e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.26e-24,56;UBERON:0005068,5.26e-24,56;UBERON:0006241,5.26e-24,56;UBERON:0007135,5.26e-24,56;UBERON:0000073,1.74e-22,53;UBERON:0002616,1.74e-22,53;UBERON:0001017,4.59e-22,81;UBERON:0000955,1.56e-20,68;UBERON:0006238,1.56e-20,68;UBERON:0002780,2.82e-19,41;UBERON:0001890,2.82e-19,41;UBERON:0003080,2.82e-19,41;UBERON:0006240,2.82e-19,41;UBERON:0001016,1.34e-18,89;UBERON:0003075,4.09e-18,82;UBERON:0007284,4.09e-18,82;UBERON:0003528,2.42e-16,34;UBERON:0002020,2.42e-16,34;UBERON:0010371,2.55e-16,104;UBERON:0001893,3.45e-16,34;UBERON:0002346,9.38e-16,86;UBERON:0010314,1.66e-15,132;UBERON:0001869,2.68e-15,32;UBERON:0002791,4.37e-15,32;UBERON:0003056,8.73e-13,61;UBERON:0002619,1.25e-12,22;UBERON:0007023,1.49e-12,114;UBERON:0000956,9.32e-12,25;UBERON:0000203,9.32e-12,25;UBERON:0001950,1.21e-11,20;UBERON:0004121,4.31e-11,171;UBERON:0000924,4.31e-11,171;UBERON:0006601,4.31e-11,171;UBERON:0000025,4.90e-10,192;UBERON:0002050,8.77e-08,564;UBERON:0004111,2.04e-07,240;UBERON:0002204,2.24e-07,167;UBERON:0000923,2.61e-07,560;UBERON:0010316,2.61e-07,560;UBERON:0005291,2.61e-07,560;UBERON:0006598,2.61e-07,560;UBERON:0010317,2.61e-07,560;UBERON:0002532,2.61e-07,560;UBERON:0005423,8.04e-07,581;UBERON:0002371,8.99e-07,76 | |||
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| ||
|short_description=p4@PAFAH1B1 | |||
}} | }} |
Latest revision as of 03:30, 19 September 2015
Short description: | p4@PAFAH1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAFAH1B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000397195, NM_000430, uc002fuw.3, uc010ckb.1_5end |
EntrezGene: | PAFAH1B1 |
HGNC: | 8574 |
UniProt: | P43034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.47e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.47e-14 | 42 |
defensive cell | 1.14e-09 | 48 |
phagocyte | 1.14e-09 | 48 |
myeloid leukocyte | 3.73e-09 | 72 |
granulocyte monocyte progenitor cell | 3.65e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.45e-07 | 66 |
macrophage dendritic cell progenitor | 1.64e-07 | 61 |
monopoietic cell | 9.72e-07 | 59 |
monocyte | 9.72e-07 | 59 |
monoblast | 9.72e-07 | 59 |
promonocyte | 9.72e-07 | 59 |