FFCP PHASE1:Hg19::chr10:73848730..73848763,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:73848730..73848763,-
|short_description=p4@SPOCK2
|description=CAGE_peak_4_at_SPOCK2_5end
|association_with_transcript=26bp_to_ENST00000317376,ENST0000041...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9806 | |EntrezGene=9806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |HGNC=13564 | ||
|UniProt=Q92563, | |TSSclassifier=strong | ||
|UniProt=Q92563,C9J767 | |||
|association_with_transcript=26bp_to_ENST00000317376,ENST00000412663,ENST00000483699,NM_001134434,NM_014767,uc001jsp.2,uc010qjt.1_5end | |||
|cluster_id=chr10:73848730..73848763,- | |||
|coexpression_cluster_id=C3043 | |||
|description=CAGE_peak_4_at_SPOCK2_5end | |||
|id=chr10:73848730..73848763,- | |||
|ontology_enrichment_celltype=CL:0000791!2.76e-15!18;CL:0000789!2.76e-15!18;CL:0002420!2.76e-15!18;CL:0002419!2.76e-15!18;CL:0000790!2.76e-15!18;CL:0000084!1.89e-11!25;CL:0000827!1.89e-11!25;CL:0000625!8.40e-10!11;CL:0000542!4.69e-09!53;CL:0000051!4.69e-09!53;CL:0000838!1.04e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.51e-21;18!CL:0000789;3.51e-21;18!CL:0002419;3.51e-21;18!CL:0000084;2.15e-15;25!CL:0000625;3.07e-13;11!CL:0000624;2.62e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.53e-21,18;CL:0000789,2.53e-21,18;CL:0002420,2.53e-21,18;CL:0002419,2.53e-21,18;CL:0000790,2.53e-21,18;CL:0000084,2.02e-15,25;CL:0000827,2.02e-15,25;CL:0000625,2.02e-13,11;CL:0000838,5.33e-10,52;CL:0000542,1.09e-09,53;CL:0000051,1.09e-09,53;CL:0000624,2.74e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;3.51e-21;18!UBERON:0006601;1.85e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;2.11e-32;41!UBERON:0001890;2.11e-32;41!UBERON:0003528;6.41e-32;34!UBERON:0002020;6.41e-32;34!UBERON:0001893;8.91e-32;34!UBERON:0000073;3.07e-31;53!UBERON:0002616;3.07e-31;53!UBERON:0001869;4.17e-31;32!UBERON:0002791;4.83e-31;32!UBERON:0002619;8.61e-30;22!UBERON:0001950;1.08e-26;20!UBERON:0000956;1.83e-25;25!UBERON:0000203;1.83e-25;25!UBERON:0000955;5.10e-21;68!UBERON:0001017;6.59e-20;75!UBERON:0001016;1.09e-16;83!UBERON:0000125;3.36e-14;9!UBERON:0002308;3.36e-14;9!UBERON:0002420;7.66e-14;9!UBERON:0007245;7.66e-14;9!UBERON:0010009;7.66e-14;9!UBERON:0010011;7.66e-14;9!UBERON:0000454;7.66e-14;9!UBERON:0007023;1.10e-12;114!UBERON:0004732;2.28e-11;13!UBERON:0009663;4.84e-11;7!UBERON:0002298;5.17e-11;6!UBERON:0004733;3.06e-10;12!UBERON:0002028;3.06e-10;12!UBERON:0000200;6.49e-10;6!UBERON:0001894;3.74e-09;7!UBERON:0000349;8.60e-09;5!UBERON:0002021;2.40e-08;5!UBERON:0001872;3.19e-08;5!UBERON:0001871;5.60e-08;6!UBERON:0000369;7.94e-07;4!UBERON:0002435;7.94e-07;4!UBERON:0000204;7.94e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.97e-59,56;UBERON:0005068,1.97e-59,56;UBERON:0006241,1.97e-59,56;UBERON:0007135,1.97e-59,56;UBERON:0000073,1.21e-54,53;UBERON:0002616,1.21e-54,53;UBERON:0002780,1.70e-45,41;UBERON:0001890,1.70e-45,41;UBERON:0003080,1.70e-45,41;UBERON:0006240,1.70e-45,41;UBERON:0000955,7.68e-45,68;UBERON:0006238,7.68e-45,68;UBERON:0001017,1.11e-44,81;UBERON:0001016,9.29e-42,89;UBERON:0003075,1.25e-38,82;UBERON:0007284,1.25e-38,82;UBERON:0003528,4.03e-38,34;UBERON:0002020,4.03e-38,34;UBERON:0001893,1.25e-37,34;UBERON:0007023,2.99e-36,114;UBERON:0002346,4.91e-36,86;UBERON:0001869,5.30e-35,32;UBERON:0002791,5.74e-35,32;UBERON:0002619,6.15e-30,22;UBERON:0003056,7.50e-30,61;UBERON:0010371,3.42e-28,104;UBERON:0001950,7.85e-27,20;UBERON:0000956,1.36e-25,25;UBERON:0000203,1.36e-25,25;UBERON:0010314,9.75e-20,132;UBERON:0004121,8.70e-16,171;UBERON:0000924,8.70e-16,171;UBERON:0006601,8.70e-16,171;UBERON:0003076,1.48e-14,15;UBERON:0003057,1.48e-14,15;UBERON:0000125,3.65e-14,9;UBERON:0002308,3.65e-14,9;UBERON:0002420,8.13e-14,9;UBERON:0007245,8.13e-14,9;UBERON:0010009,8.13e-14,9;UBERON:0010011,8.13e-14,9;UBERON:0000454,8.13e-14,9;UBERON:0011216,5.74e-13,223;UBERON:0004732,2.26e-11,13;UBERON:0009663,5.28e-11,7;UBERON:0002298,5.60e-11,6;UBERON:0000025,2.04e-10,192;UBERON:0004733,2.96e-10,12;UBERON:0002028,2.96e-10,12;UBERON:0007277,2.96e-10,12;UBERON:0000200,6.32e-10,6;UBERON:0001894,3.91e-09,7;UBERON:0006222,3.91e-09,7;UBERON:0000349,7.85e-09,5;UBERON:0002021,2.52e-08,5;UBERON:0001872,2.81e-08,5;UBERON:0001871,4.50e-08,6;UBERON:0002370,7.04e-07,4;UBERON:0005058,7.04e-07,4;UBERON:0009113,7.04e-07,4;UBERON:0003295,7.04e-07,4;UBERON:0005562,7.04e-07,4;UBERON:0000369,8.20e-07,4;UBERON:0002435,8.20e-07,4;UBERON:0000204,8.20e-07,4;UBERON:0010082,8.20e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,1.22866968250754,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,3.93364276848904,5.37361157336098,0.77408061658038,0,0,0,0,0,0.293600439334847,1.66198622559563,2.00544447470142,3.47217393145363,0,0.32389366601898,0.257575567634187,0,0.755751887377619,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0.569212969109448,1.17447437874188,1.91136614062614,0,1.12101712596307,0,3.14735632182133,1.57204305099666,4.93443597598822,4.17966238476695,5.21475626613745,4.2610302516126,5.84480185223734,4.90206010294764,5.30290633454707,3.54454231333794,8.93652750424551,2.17755243533648,2.9913649938772,2.30213066445147,2.21080014228679,4.34704628602579,3.70716407905151,2.40786745280742,3.1360657141493,1.47302145506836,3.06576394881537,1.03088233644789,1.51811815211702,2.86708872891687,1.95325036156926,1.90090408889675,3.312652619711,4.47953139040464,3.74792179657038,1.18388626022008,1.64225599384209,7.4594494993151,6.41856469880418,6.22744936696036,0,0,0,0,0,0,0,0,0,0,0.087834785693126,5.04269440666194,0,0,0,0,0,1.66943437013739,4.0039643754609,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,5.15591662370225,6.89607660706745,7.54696512008311,9.24069861214188,0,0,0.773288812777695,0.670065061337395,1.27587750330633,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,1.6541442089831,3.01999881146064,2.77491650288955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,3.01013864312912,0,1.66215201785745,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0,1.42939065274673,0.822724546172388,0.648473311192717,1.08006287447623,0,0,0,0,0.371606350251437,0,0.213425530045242,0,0.399158742865633,0,0,0,0,0.912938716132769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9356241254293,6.75213198770461,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,3.9384658428634,0,0,0,0,11.6319929531426,8.90573742353772,7.98455192004777,0,0,0,0,0,0,1.72371686620732,0.291604613383254,0.173624994933292,7.08593108651071,5.30624329951795,1.52581736317083,5.75012151642368,9.16197618755997,8.99480128331287,0,0,0.230850775511391,0,0,0,0,1.27600463892768,0,0.533034776018635,1.02193298195737,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.707660516026713,1.22206028986725,0,0,0,4.44847477672468,0,3.27970224015475,0,0,0,0,0,1.83643656978294,0.252746318513952,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,10.169133335124,0,0,8.67357904595538,13.884148174171,0,0.213452994739353,0,0,0,0.343189995723929,0,0,3.29971648463514,0,0,0,0,14.4100869290349,5.20240439789574,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0,0,0.157566364614447,0.247247575143499,0.337017719270924,0,0,15.9045937961861,10.7600690828145,0,0,0,0,0,10.8134210851284,0,1.49730843868477,2.8850023474249,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,14.6089740688552,16.1323774126082,0,0,0.533937062838473,0.471612915298998,1.65695622138878,1.48849806543585,0,0,0,0,0,0,0,0,7.97461361970287,9.15196986764724,6.38473746603149,21.7895494362227,12.5349828236643,28.0054777265639,0,0,0,0,0,0.468334905806882,3.91286777249228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,9.26404341482917,0,0,0,0,0,0,0,5.3920790099175,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0,2.20172318598255,0.218419276384028,0,0,0.371807292777007,0,0,0,0,0,0,5.3952549081026,8.5017945795351,4.62938191265739,9.02512002659322,4.53729053199093,10.7193741319538,15.8246132719214,4.28308260777463,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,9.11757392348328,7.81078098613847,8.26747186004736,6.91232331113584,3.82882366312754,0,0,0,0.127762427639595,2.67850917939143,1.3451348888753,2.42786241694653,2.95960848756687,1.06442844195167,0,0,8.02042849126614,9.99746158155306,0,0,0,7.38443272605209,0,0.913158720509496,0,0,2.50167904618297,0,0,0,0,0,0,0,0,0,0,0,15.3501601924514,0,0,0,0,0,0,0.102662806856247,0,0,0,1.39265542612958,0,0.11294608203896,0,0,0.231522474323834,0.218559560503957,0,0,0,28.0721107974372,43.9628672484087,8.8757702792514,0,0.563903507879121,0.386747327841463,0,0,0,0,0,0.458729283404541,8.74371457223853,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| ||
|short_description=p4@SPOCK2 | |||
}} | }} |
Latest revision as of 05:11, 19 September 2015
Short description: | p4@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPOCK2_5end |
Coexpression cluster: | C3043_spinal_medulla_serous_locus_gall_hippocampus_thalamus |
Association with transcript: | 26bp_to_ENST00000317376, ENST00000412663, ENST00000483699, NM_001134434, NM_014767, uc001jsp.2, uc010qjt.1_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | Q92563C9J767 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.53e-21 | 18 |
alpha-beta T cell | 2.53e-21 | 18 |
immature T cell | 2.53e-21 | 18 |
mature T cell | 2.53e-21 | 18 |
immature alpha-beta T cell | 2.53e-21 | 18 |
T cell | 2.02e-15 | 25 |
pro-T cell | 2.02e-15 | 25 |
CD8-positive, alpha-beta T cell | 2.02e-13 | 11 |
lymphoid lineage restricted progenitor cell | 5.33e-10 | 52 |
lymphocyte | 1.09e-09 | 53 |
common lymphoid progenitor | 1.09e-09 | 53 |
CD4-positive, alpha-beta T cell | 2.74e-08 | 6 |