FFCP PHASE1:Hg19::chr4:90759440..90759472,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6622 | |EntrezGene=6622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11138 | |HGNC=11138 | ||
|TSSclassifier=strong | |||
|UniProt=P37840 | |UniProt=P37840 | ||
|association_with_transcript=0bp_to_ENST00000336904,NM_001146055,uc003hsr.2_5end | |association_with_transcript=0bp_to_ENST00000336904,NM_001146055,uc003hsr.2_5end | ||
|cluster_id=chr4:90759440..90759472,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_4_at_SNCA_5end | |description=CAGE_peak_4_at_SNCA_5end | ||
|id=chr4:90759440..90759472,- | |id=chr4:90759440..90759472,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.77e-12;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001869;1.06e-37;32!UBERON:0003528;2.64e-36;34!UBERON:0002020;2.64e-36;34!UBERON:0002619;3.93e-36;22!UBERON:0002791;3.41e-35;32!UBERON:0002780;4.71e-34;41!UBERON:0001890;4.71e-34;41!UBERON:0001893;5.22e-34;34!UBERON:0001950;8.79e-33;20!UBERON:0000073;1.40e-31;53!UBERON:0002616;1.40e-31;53!UBERON:0000956;4.46e-31;25!UBERON:0000203;4.46e-31;25!UBERON:0001017;3.75e-24;75!UBERON:0000955;9.40e-24;68!UBERON:0001016;2.76e-18;83!UBERON:0002420;1.12e-12;9!UBERON:0007245;1.12e-12;9!UBERON:0010009;1.12e-12;9!UBERON:0010011;1.12e-12;9!UBERON:0000454;1.12e-12;9!UBERON:0000125;1.97e-12;9!UBERON:0002308;1.97e-12;9!UBERON:0000200;5.53e-12;6!UBERON:0007023;8.80e-12;114!UBERON:0004733;1.51e-10;12!UBERON:0002028;1.51e-10;12!UBERON:0002298;2.71e-10;6!UBERON:0001872;6.75e-10;5!UBERON:0000349;7.00e-10;5!UBERON:0001871;1.10e-09;6!UBERON:0002021;1.17e-09;5!UBERON:0000178;1.35e-09;15!UBERON:0000179;1.35e-09;15!UBERON:0000463;1.35e-09;15!UBERON:0004732;1.41e-09;13!UBERON:0009663;1.74e-09;7!UBERON:0001894;5.41e-09;7!UBERON:0011216;5.51e-09;132!UBERON:0000369;2.53e-08;4!UBERON:0002435;2.53e-08;4!UBERON:0000204;2.53e-08;4!UBERON:0003296;1.26e-07;4!UBERON:0010133;1.26e-07;4!UBERON:0001870;6.89e-07;3!UBERON:0002680;8.65e-07;9!UBERON:0001895;8.65e-07;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.95e-31!57;UBERON:0005068!1.95e-31!57;UBERON:0006241!1.95e-31!57;UBERON:0007135!1.95e-31!57;UBERON:0003075!1.56e-30!86;UBERON:0007284!1.56e-30!86;UBERON:0007023!2.76e-30!115;UBERON:0005743!4.16e-30!86;UBERON:0000033!1.56e-29!123;UBERON:0000073!2.74e-29!94;UBERON:0001016!2.74e-29!94;UBERON:0002346!9.28e-29!90;UBERON:0000153!1.06e-28!129;UBERON:0007811!1.06e-28!129;UBERON:0001017!3.01e-28!82;UBERON:0002616!1.00e-27!59;UBERON:0000955!5.20e-27!69;UBERON:0006238!5.20e-27!69;UBERON:0002780!1.12e-26!41;UBERON:0001890!1.12e-26!41;UBERON:0006240!1.12e-26!41;UBERON:0003056!8.24e-26!61;UBERON:0003080!1.29e-25!42;UBERON:0004121!2.11e-24!169;UBERON:0000924!1.45e-23!173;UBERON:0006601!1.45e-23!173;UBERON:0002020!7.92e-22!34;UBERON:0003528!7.92e-22!34;UBERON:0001893!1.29e-21!34;UBERON:0002791!8.45e-21!33;UBERON:0001869!1.11e-20!32;UBERON:0002619!1.67e-18!22;UBERON:0001950!7.73e-17!20;UBERON:0000956!4.06e-15!25;UBERON:0000203!4.06e-15!25;UBERON:0000119!1.30e-11!312;UBERON:0004111!2.13e-11!241;UBERON:0000483!3.60e-11!309;UBERON:0000477!9.47e-10!286;UBERON:0000025!9.95e-10!194;UBERON:0002420!1.85e-08!9;UBERON:0007245!1.85e-08!9;UBERON:0010009!1.85e-08!9;UBERON:0010011!1.85e-08!9;UBERON:0000454!1.85e-08!9;UBERON:0002308!2.66e-08!9;UBERON:0000125!2.66e-08!9;UBERON:0000475!3.39e-08!365;UBERON:0000064!7.59e-08!219;UBERON:0000922!2.02e-07!612;UBERON:0000481!3.44e-07!347;UBERON:0003076!4.06e-07!15;UBERON:0003057!4.06e-07!15;UBERON:0009663!8.04e-07!7;UBERON:0000200!8.92e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.06e-37;32!UBERON:0003528;2.64e-36;34!UBERON:0002020;2.64e-36;34!UBERON:0002619;3.93e-36;22!UBERON:0002791;3.41e-35;32!UBERON:0002780;4.71e-34;41!UBERON:0001890;4.71e-34;41!UBERON:0001893;5.22e-34;34!UBERON:0001950;8.79e-33;20!UBERON:0000073;1.40e-31;53!UBERON:0002616;1.40e-31;53!UBERON:0000956;4.46e-31;25!UBERON:0000203;4.46e-31;25!UBERON:0001017;3.75e-24;75!UBERON:0000955;9.40e-24;68!UBERON:0001016;2.76e-18;83!UBERON:0002420;1.12e-12;9!UBERON:0007245;1.12e-12;9!UBERON:0010009;1.12e-12;9!UBERON:0010011;1.12e-12;9!UBERON:0000454;1.12e-12;9!UBERON:0000125;1.97e-12;9!UBERON:0002308;1.97e-12;9!UBERON:0000200;5.53e-12;6!UBERON:0007023;8.80e-12;114!UBERON:0004733;1.51e-10;12!UBERON:0002028;1.51e-10;12!UBERON:0002298;2.71e-10;6!UBERON:0001872;6.75e-10;5!UBERON:0000349;7.00e-10;5!UBERON:0001871;1.10e-09;6!UBERON:0002021;1.17e-09;5!UBERON:0000178;1.35e-09;15!UBERON:0000179;1.35e-09;15!UBERON:0000463;1.35e-09;15!UBERON:0004732;1.41e-09;13!UBERON:0009663;1.74e-09;7!UBERON:0001894;5.41e-09;7!UBERON:0011216;5.51e-09;132!UBERON:0000369;2.53e-08;4!UBERON:0002435;2.53e-08;4!UBERON:0000204;2.53e-08;4!UBERON:0003296;1.26e-07;4!UBERON:0010133;1.26e-07;4!UBERON:0001870;6.89e-07;3!UBERON:0002680;8.65e-07;9!UBERON:0001895;8.65e-07;9 | |||
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| ||
|short_description=p4@SNCA | |short_description=p4@SNCA | ||
}} | }} |
Latest revision as of 08:52, 19 September 2015
Short description: | p4@SNCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNCA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000336904, NM_001146055, uc003hsr.2_5end |
EntrezGene: | SNCA |
HGNC: | 11138 |
UniProt: | P37840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data