FFCP PHASE1:Hg19::chr19:50832300..50832335,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:50832300..50832335,- to FFCP PHASE1:Hg19::chr19:50832300..50832335,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3748 | |EntrezGene=3748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6235 | |HGNC=6235 | ||
|TSSclassifier=strong | |||
|UniProt=E7EV19 | |UniProt=E7EV19 | ||
|association_with_transcript=298bp_to_ENST00000443843_5end | |||
|cluster_id=chr19:50832300..50832335,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_KCNC3_5end | |||
|id=chr19:50832300..50832335,- | |||
|ontology_enrichment_celltype=CL:0002194!3.72e-18!63;CL:0000576!3.72e-18!63;CL:0000040!3.72e-18!63;CL:0000559!3.72e-18!63;CL:0002009!5.56e-18!65;CL:0000557!2.42e-16!71;CL:0002057!1.24e-15!42;CL:0000839!9.97e-15!70;CL:0000766!1.42e-13!76;CL:0000860!5.46e-13!45;CL:0002087!2.67e-09!119;CL:0000763!5.10e-08!112;CL:0000049!5.10e-08!112;CL:0000738!8.54e-08!140;CL:0002031!2.23e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.56e-13;48!CL:0000473;6.93e-13;39!CL:0000234;6.93e-13;39!CL:0000860;1.12e-12;33!CL:0002057;1.12e-12;33!CL:0000766;1.00e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.10e-24,59;CL:0000576,1.10e-24,59;CL:0000040,1.10e-24,59;CL:0000559,1.10e-24,59;CL:0002009,3.78e-24,61;CL:0000473,2.38e-21,48;CL:0000234,2.38e-21,48;CL:0000557,5.61e-21,67;CL:0000839,1.31e-19,66;CL:0000860,1.04e-18,42;CL:0002057,1.04e-18,42;CL:0000766,1.11e-18,72;CL:0000763,3.25e-12,108;CL:0000049,3.25e-12,108;CL:0002087,3.05e-10,115;CL:0000738,1.61e-08,136;CL:0002031,7.82e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-29!115;UBERON:0001049!3.20e-26!57;UBERON:0005068!3.20e-26!57;UBERON:0006241!3.20e-26!57;UBERON:0007135!3.20e-26!57;UBERON:0001017!9.39e-22!82;UBERON:0005743!7.49e-21!86;UBERON:0002616!1.12e-20!59;UBERON:0002780!1.23e-20!41;UBERON:0001890!1.23e-20!41;UBERON:0006240!1.23e-20!41;UBERON:0003080!2.70e-20!42;UBERON:0000955!5.32e-19!69;UBERON:0006238!5.32e-19!69;UBERON:0000073!2.20e-17!94;UBERON:0001016!2.20e-17!94;UBERON:0003075!3.26e-17!86;UBERON:0007284!3.26e-17!86;UBERON:0002020!5.64e-17!34;UBERON:0003528!5.64e-17!34;UBERON:0001893!6.04e-17!34;UBERON:0002346!8.73e-17!90;UBERON:0002791!2.94e-16!33;UBERON:0001869!4.74e-16!32;UBERON:0002390!2.27e-15!102;UBERON:0003061!2.27e-15!102;UBERON:0002619!4.33e-15!22;UBERON:0001950!6.79e-14!20;UBERON:0003056!5.49e-13!61;UBERON:0002193!9.81e-13!112;UBERON:0000956!5.66e-12!25;UBERON:0000203!5.66e-12!25;UBERON:0002371!1.29e-11!80;UBERON:0001474!5.12e-10!86;UBERON:0002405!3.08e-09!115;UBERON:0000062!8.05e-09!511;UBERON:0000922!2.32e-08!612;UBERON:0003076!4.01e-07!15;UBERON:0003057!4.01e-07!15;UBERON:0000468!4.20e-07!659;UBERON:0002050!4.95e-07!605;UBERON:0005423!4.95e-07!605;UBERON:0000923!6.48e-07!604;UBERON:0005291!6.48e-07!604;UBERON:0006598!6.48e-07!604;UBERON:0002532!6.48e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.70e-18;41!UBERON:0001890;2.70e-18;41!UBERON:0002619;5.18e-18;22!UBERON:0001893;1.23e-17;34!UBERON:0001869;1.48e-17;32!UBERON:0003528;1.71e-17;34!UBERON:0002020;1.71e-17;34!UBERON:0002791;2.56e-17;32!UBERON:0000073;5.13e-17;53!UBERON:0002616;5.13e-17;53!UBERON:0001950;1.49e-16;20!UBERON:0000956;1.44e-14;25!UBERON:0000203;1.44e-14;25!UBERON:0000955;7.23e-11;68!UBERON:0001017;5.71e-10;75!UBERON:0007023;2.24e-09;114!UBERON:0001016;9.79e-09;83!UBERON:0000125;1.20e-07;9!UBERON:0002308;1.20e-07;9!UBERON:0002420;1.31e-07;9!UBERON:0007245;1.31e-07;9!UBERON:0010009;1.31e-07;9!UBERON:0010011;1.31e-07;9!UBERON:0000454;1.31e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.36e-31,56;UBERON:0005068,1.36e-31,56;UBERON:0006241,1.36e-31,56;UBERON:0007135,1.36e-31,56;UBERON:0007023,1.89e-30,114;UBERON:0000073,1.09e-29,53;UBERON:0002616,1.09e-29,53;UBERON:0002780,3.44e-25,41;UBERON:0001890,3.44e-25,41;UBERON:0003080,3.44e-25,41;UBERON:0006240,3.44e-25,41;UBERON:0001017,8.56e-25,81;UBERON:0000955,1.78e-22,68;UBERON:0006238,1.78e-22,68;UBERON:0001016,3.60e-21,89;UBERON:0003528,1.03e-20,34;UBERON:0002020,1.03e-20,34;UBERON:0001893,1.12e-20,34;UBERON:0002390,1.72e-20,98;UBERON:0003061,1.72e-20,98;UBERON:0001869,1.38e-19,32;UBERON:0002791,2.68e-19,32;UBERON:0003075,1.34e-18,82;UBERON:0007284,1.34e-18,82;UBERON:0002619,4.79e-18,22;UBERON:0002346,1.82e-17,86;UBERON:0002193,1.20e-16,108;UBERON:0001950,1.37e-16,20;UBERON:0002371,8.23e-16,76;UBERON:0003056,3.09e-15,61;UBERON:0000956,1.34e-14,25;UBERON:0000203,1.34e-14,25;UBERON:0001474,7.02e-14,82;UBERON:0002405,4.38e-12,93;UBERON:0004765,7.68e-11,90;UBERON:0010371,6.62e-10,104;UBERON:0000922,1.11e-09,592;UBERON:0001434,4.35e-09,100;UBERON:0005423,3.53e-08,581;UBERON:0010314,6.24e-08,132;UBERON:0000923,9.23e-08,560;UBERON:0010316,9.23e-08,560;UBERON:0005291,9.23e-08,560;UBERON:0006598,9.23e-08,560;UBERON:0010317,9.23e-08,560;UBERON:0002532,9.23e-08,560;UBERON:0000125,1.14e-07,9;UBERON:0002308,1.14e-07,9;UBERON:0002420,1.22e-07,9;UBERON:0007245,1.22e-07,9;UBERON:0010009,1.22e-07,9;UBERON:0010011,1.22e-07,9;UBERON:0000454,1.22e-07,9;UBERON:0003076,1.25e-07,15;UBERON:0003057,1.25e-07,15;UBERON:0002050,1.57e-07,564;UBERON:0011216,2.10e-07,223 | |||
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| ||
|short_description=p1@KCNC3 | |||
}} | }} |
Latest revision as of 10:45, 19 September 2015
Short description: | p1@KCNC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNC3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 298bp_to_ENST00000443843_5end |
EntrezGene: | KCNC3 |
HGNC: | 6235 |
UniProt: | E7EV19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.10e-24 | 59 |
monocyte | 1.10e-24 | 59 |
monoblast | 1.10e-24 | 59 |
promonocyte | 1.10e-24 | 59 |
macrophage dendritic cell progenitor | 3.78e-24 | 61 |
defensive cell | 2.38e-21 | 48 |
phagocyte | 2.38e-21 | 48 |
granulocyte monocyte progenitor cell | 5.61e-21 | 67 |
myeloid lineage restricted progenitor cell | 1.31e-19 | 66 |
classical monocyte | 1.04e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-18 | 42 |
myeloid leukocyte | 1.11e-18 | 72 |
myeloid cell | 3.25e-12 | 108 |
common myeloid progenitor | 3.25e-12 | 108 |
nongranular leukocyte | 3.05e-10 | 115 |
leukocyte | 1.61e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 7.82e-08 | 120 |