FFCP PHASE1:Hg19::chr22:26565421..26565434,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:26565421..26565434,+
|short_description=p1@SEZ6L
|description=CAGE_peak_1_at_SEZ6L_5end
|association_with_transcript=-5bp_to_ENST00000404234,ENST000005296...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23544 | |EntrezGene=23544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10763 | |HGNC=10763 | ||
|TSSclassifier=strong | |||
|UniProt=B0QYG3,Q9BYH1,B7ZLJ6,B7ZLJ8 | |UniProt=B0QYG3,Q9BYH1,B7ZLJ6,B7ZLJ8 | ||
|association_with_transcript=-5bp_to_ENST00000404234,ENST00000529632,NM_001184773,NM_001184774,NM_001184775,NM_001184776,NM_001184777,NM_021115_5end | |||
|cluster_id=chr22:26565421..26565434,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_SEZ6L_5end | |||
|id=chr22:26565421..26565434,+ | |||
|ontology_enrichment_celltype=CL:0000047!6.42e-09!8;CL:0002319!4.01e-08!25;CL:0000540!7.32e-07!6;CL:0000031!7.32e-07!6;CL:0000404!7.32e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.89e-09;6!CL:0000404;2.89e-09;6!CL:0002319;4.19e-07;25!CL:0002322;4.28e-07;5!CL:0002321;9.20e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.68e-12,8;CL:0000540,2.63e-09,6;CL:0000031,2.63e-09,6;CL:0000404,2.63e-09,6;CL:0002319,4.07e-07,25;CL:0002322,4.65e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.80e-18;82!CL:0000031;2.89e-09;6!UBERON:0002532;1.81e-07;206!UBERON:0010316;1.81e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.79e-07;22!DOID:2994;4.79e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.07e-07,22;DOID:2994,5.07e-07,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;1.78e-42;53!UBERON:0002616;1.78e-42;53!UBERON:0002780;2.76e-42;41!UBERON:0001890;2.76e-42;41!UBERON:0003528;4.37e-42;34!UBERON:0002020;4.37e-42;34!UBERON:0001869;7.32e-42;32!UBERON:0001893;8.88e-42;34!UBERON:0002791;1.42e-41;32!UBERON:0002619;1.89e-39;22!UBERON:0000956;1.16e-36;25!UBERON:0000203;1.16e-36;25!UBERON:0001950;8.30e-36;20!UBERON:0001017;1.93e-27;75!UBERON:0000955;2.73e-27;68!UBERON:0001016;1.76e-26;83!UBERON:0004732;2.38e-17;13!UBERON:0004733;6.48e-16;12!UBERON:0002028;6.48e-16;12!UBERON:0002420;2.20e-14;9!UBERON:0007245;2.20e-14;9!UBERON:0010009;2.20e-14;9!UBERON:0010011;2.20e-14;9!UBERON:0000454;2.20e-14;9!UBERON:0000125;2.53e-14;9!UBERON:0002308;2.53e-14;9!UBERON:0000922;6.58e-13;49!UBERON:0001871;7.32e-13;6!UBERON:0007023;3.25e-12;114!UBERON:0002680;1.16e-11;9!UBERON:0001895;1.16e-11;9!UBERON:0000200;2.95e-11;6!UBERON:0009663;4.14e-11;7!UBERON:0001894;4.87e-11;7!UBERON:0002298;9.21e-11;6!UBERON:0011216;1.60e-10;132!UBERON:0002021;4.80e-10;5!UBERON:0000349;5.35e-10;5!UBERON:0001872;6.94e-10;5!UBERON:0000369;3.72e-07;4!UBERON:0002435;3.72e-07;4!UBERON:0000204;3.72e-07;4!UBERON:0002037;4.97e-07;6!UBERON:0002784;5.84e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.52e-83,89;UBERON:0001017,7.67e-81,81;UBERON:0001049,1.56e-79,56;UBERON:0005068,1.56e-79,56;UBERON:0006241,1.56e-79,56;UBERON:0007135,1.56e-79,56;UBERON:0000073,7.95e-75,53;UBERON:0002616,7.95e-75,53;UBERON:0000955,6.52e-62,68;UBERON:0006238,6.52e-62,68;UBERON:0002780,2.19e-59,41;UBERON:0001890,2.19e-59,41;UBERON:0003080,2.19e-59,41;UBERON:0006240,2.19e-59,41;UBERON:0002346,1.47e-56,86;UBERON:0003075,4.79e-55,82;UBERON:0007284,4.79e-55,82;UBERON:0003528,9.24e-50,34;UBERON:0002020,9.24e-50,34;UBERON:0001893,2.06e-49,34;UBERON:0001869,1.01e-46,32;UBERON:0002791,2.00e-46,32;UBERON:0010371,6.41e-45,104;UBERON:0004121,3.01e-43,171;UBERON:0000924,3.01e-43,171;UBERON:0006601,3.01e-43,171;UBERON:0003056,7.61e-40,61;UBERON:0002619,1.75e-39,22;UBERON:0007023,6.92e-39,114;UBERON:0000956,1.22e-36,25;UBERON:0000203,1.22e-36,25;UBERON:0001950,7.69e-36,20;UBERON:0011216,8.15e-34,223;UBERON:0010314,1.25e-32,132;UBERON:0003076,2.99e-20,15;UBERON:0003057,2.99e-20,15;UBERON:0000025,1.25e-17,192;UBERON:0004732,2.24e-17,13;UBERON:0004733,6.01e-16,12;UBERON:0002028,6.01e-16,12;UBERON:0007277,6.01e-16,12;UBERON:0002420,2.17e-14,9;UBERON:0007245,2.17e-14,9;UBERON:0010009,2.17e-14,9;UBERON:0010011,2.17e-14,9;UBERON:0000454,2.17e-14,9;UBERON:0000125,2.51e-14,9;UBERON:0002308,2.51e-14,9;UBERON:0001871,6.95e-13,6;UBERON:0004111,6.19e-12,240;UBERON:0002680,1.10e-11,9;UBERON:0001895,1.10e-11,9;UBERON:0010092,1.10e-11,9;UBERON:0000200,3.01e-11,6;UBERON:0009663,4.08e-11,7;UBERON:0001894,4.14e-11,7;UBERON:0006222,4.14e-11,7;UBERON:0002298,9.14e-11,6;UBERON:0000922,4.56e-10,592;UBERON:0002021,4.81e-10,5;UBERON:0000349,5.36e-10,5;UBERON:0001872,6.89e-10,5;UBERON:0000483,1.15e-09,306;UBERON:0000119,2.10e-09,309;UBERON:0000923,3.73e-09,560;UBERON:0010316,3.73e-09,560;UBERON:0005291,3.73e-09,560;UBERON:0006598,3.73e-09,560;UBERON:0010317,3.73e-09,560;UBERON:0002532,3.73e-09,560;UBERON:0002050,6.63e-09,564;UBERON:0005423,6.90e-08,581;UBERON:0000369,3.69e-07,4;UBERON:0002435,3.69e-07,4;UBERON:0000204,3.69e-07,4;UBERON:0010082,3.69e-07,4;UBERON:0002037,4.68e-07,6;UBERON:0006215,4.68e-07,6;UBERON:0002784,4.96e-07,4 | |||
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| ||
|short_description=p1@SEZ6L | |||
}} | }} |
Latest revision as of 12:28, 19 September 2015
Short description: | p1@SEZ6L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEZ6L_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -5bp_to_ENST00000404234, ENST00000529632, NM_001184773, NM_001184774, NM_001184775, NM_001184776, NM_001184777, NM_021115_5end |
EntrezGene: | SEZ6L |
HGNC: | 10763 |
UniProt: | B0QYG3Q9BYH1B7ZLJ6B7ZLJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.68e-12 | 8 |
neuron | 2.63e-09 | 6 |
neuroblast | 2.63e-09 | 6 |
electrically signaling cell | 2.63e-09 | 6 |
neural cell | 4.07e-07 | 25 |
embryonic stem cell | 4.65e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.07e-07 | 22 |
germ cell cancer | 5.07e-07 | 22 |