FFCP PHASE1:Hg19::chr18:43304137..43304155,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:43304137..43304155,+
|short_description=p1@SLC14A1
|description=CAGE_peak_1_at_SLC14A1_5end
|association_with_transcript=0bp_to_ENST00000402943,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6563 | |EntrezGene=6563 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10918 | |HGNC=10918 | ||
|TSSclassifier=strong | |||
|UniProt=B4DFJ8,B3KXJ3,F5GWS2 | |UniProt=B4DFJ8,B3KXJ3,F5GWS2 | ||
|association_with_transcript=0bp_to_ENST00000402943,ENST00000502059,ENST00000535474_5end | |||
|cluster_id=chr18:43304137..43304155,+ | |||
|description=CAGE_peak_1_at_SLC14A1_5end | |||
|id=chr18:43304137..43304155,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.38e-13!180;CL:0000680!4.83e-11!57;CL:0000056!4.83e-11!57;CL:0000355!4.83e-11!57;CL:0000192!1.54e-10!42;CL:0000514!1.54e-10!42;CL:0000359!3.33e-10!32;CL:0000187!5.57e-10!54;CL:0000183!8.19e-10!59;CL:0000393!1.55e-07!60;CL:0000211!1.55e-07!60;CL:0000057!7.17e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.28e-10;32!CL:0000192;2.12e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.34e-11,32;CL:0000192,5.73e-11,43;CL:0000514,5.73e-11,43;CL:0000680,7.80e-11,58;CL:0000056,7.80e-11,58;CL:0000355,7.80e-11,58;CL:0000187,1.23e-09,55;CL:0000393,1.29e-07,61;CL:0000211,1.29e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.12e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.79e-15;34!UBERON:0003528;7.93e-15;34!UBERON:0002020;7.93e-15;34!UBERON:0002791;1.52e-14;32!UBERON:0001869;2.08e-14;32!UBERON:0000073;3.57e-14;53!UBERON:0002616;3.57e-14;53!UBERON:0002780;4.40e-14;41!UBERON:0001890;4.40e-14;41!UBERON:0002619;1.43e-13;22!UBERON:0001950;6.90e-12;20!UBERON:0000956;4.60e-11;25!UBERON:0000203;4.60e-11;25!UBERON:0001017;5.07e-11;75!UBERON:0000955;3.07e-10;68!UBERON:0004573;2.42e-09;33!UBERON:0004571;2.42e-09;33!UBERON:0000125;1.25e-08;9!UBERON:0002308;1.25e-08;9!UBERON:0002420;1.87e-08;9!UBERON:0007245;1.87e-08;9!UBERON:0010009;1.87e-08;9!UBERON:0010011;1.87e-08;9!UBERON:0000454;1.87e-08;9!UBERON:0004732;2.49e-08;13!UBERON:0001637;2.82e-08;42!UBERON:0003509;2.82e-08;42!UBERON:0004572;2.82e-08;42!UBERON:0004733;5.97e-08;12!UBERON:0002028;5.97e-08;12!UBERON:0001016;6.56e-08;83!UBERON:0007023;1.44e-07;114!UBERON:0009663;6.35e-07;7 | |||
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| ||
|short_description=p1@SLC14A1 | |||
}} | }} |
Latest revision as of 14:29, 19 September 2015
Short description: | p1@SLC14A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC14A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402943, ENST00000502059, ENST00000535474_5end |
EntrezGene: | SLC14A1 |
HGNC: | 10918 |
UniProt: | B4DFJ8B3KXJ3F5GWS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.34e-11 | 32 |
smooth muscle cell | 5.73e-11 | 43 |
smooth muscle myoblast | 5.73e-11 | 43 |
muscle precursor cell | 7.80e-11 | 58 |
myoblast | 7.80e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.80e-11 | 58 |
muscle cell | 1.23e-09 | 55 |
electrically responsive cell | 1.29e-07 | 61 |
electrically active cell | 1.29e-07 | 61 |