FFCP PHASE1:Hg19::chr5:110559929..110559940,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=814 | |EntrezGene=814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1464 | |HGNC=1464 | ||
|TSSclassifier=strong | |||
|UniProt=Q16566 | |UniProt=Q16566 | ||
|association_with_transcript=-6bp_to_NM_001744_5end | |association_with_transcript=-6bp_to_NM_001744_5end | ||
|cluster_id=chr5:110559929..110559940,+ | |||
|coexpression_cluster_id=C118 | |coexpression_cluster_id=C118 | ||
|description=CAGE_peak_8_at_CAMK4_5end | |description=CAGE_peak_8_at_CAMK4_5end | ||
|id=chr5:110559929..110559940,+ | |id=chr5:110559929..110559940,+ | ||
|ontology_enrichment_celltype=CL:0000084!8.73e-16!25;CL:0000827!8.73e-16!25;CL:0000791!1.04e-13!18;CL:0000789!1.04e-13!18;CL:0002420!1.04e-13!18;CL:0002419!1.04e-13!18;CL:0000790!1.04e-13!18;CL:0000838!5.54e-13!52;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000625!1.96e-08!11;CL:0000624!2.98e-08!6 | |ontology_enrichment_celltype=CL:0000084!8.73e-16!25;CL:0000827!8.73e-16!25;CL:0000791!1.04e-13!18;CL:0000789!1.04e-13!18;CL:0002420!1.04e-13!18;CL:0002419!1.04e-13!18;CL:0000790!1.04e-13!18;CL:0000838!5.54e-13!52;CL:0000542!1.46e-12!53;CL:0000051!1.46e-12!53;CL:0000625!1.96e-08!11;CL:0000624!2.98e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.17e-10;2!CL:0000792;1.17e-10;2!CL:0002677;1.17e-10;2!CL:0000624;8.27e-08;6!CL:0000898;2.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,9.63e-11,2;CL:0000792,9.63e-11,2;CL:0002677,9.63e-11,2;CL:0000624,6.19e-08,6;CL:0000898,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.57e-17;3!UBERON:0006601;1.08e-11;82!UBERON:0010122;1.27e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.30e-28!57;UBERON:0005068!2.30e-28!57;UBERON:0006241!2.30e-28!57;UBERON:0007135!2.30e-28!57;UBERON:0000955!4.00e-28!69;UBERON:0006238!4.00e-28!69;UBERON:0002780!2.02e-27!41;UBERON:0001890!2.02e-27!41;UBERON:0006240!2.02e-27!41;UBERON:0002616!6.56e-27!59;UBERON:0001869!8.86e-27!32;UBERON:0003080!1.72e-26!42;UBERON:0001893!3.76e-26!34;UBERON:0002020!4.73e-26!34;UBERON:0003528!4.73e-26!34;UBERON:0002791!6.00e-25!33;UBERON:0001017!1.30e-23!82;UBERON:0003056!6.79e-23!61;UBERON:0003075!3.66e-22!86;UBERON:0007284!3.66e-22!86;UBERON:0002619!7.06e-22!22;UBERON:0005743!9.06e-22!86;UBERON:0000073!2.60e-21!94;UBERON:0001016!2.60e-21!94;UBERON:0007023!3.64e-21!115;UBERON:0002346!1.87e-20!90;UBERON:0001950!3.01e-20!20;UBERON:0000153!2.62e-19!129;UBERON:0007811!2.62e-19!129;UBERON:0000956!1.86e-18!25;UBERON:0000203!1.86e-18!25;UBERON:0000033!2.32e-17!123;UBERON:0004121!6.17e-12!169;UBERON:0000924!2.93e-11!173;UBERON:0006601!2.93e-11!173;UBERON:0002420!6.72e-10!9;UBERON:0007245!6.72e-10!9;UBERON:0010009!6.72e-10!9;UBERON:0010011!6.72e-10!9;UBERON:0000454!6.72e-10!9;UBERON:0002308!4.25e-09!9;UBERON:0000125!4.25e-09!9;UBERON:0000200!1.50e-08!6;UBERON:0001871!6.34e-08!7;UBERON:0009663!1.45e-07!7;UBERON:0002021!2.77e-07!5;UBERON:0000369!6.99e-07!4;UBERON:0002435!6.99e-07!4;UBERON:0000204!6.99e-07!4;UBERON:0010082!6.99e-07!4;UBERON:0000349!7.30e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!2.30e-28!57;UBERON:0005068!2.30e-28!57;UBERON:0006241!2.30e-28!57;UBERON:0007135!2.30e-28!57;UBERON:0000955!4.00e-28!69;UBERON:0006238!4.00e-28!69;UBERON:0002780!2.02e-27!41;UBERON:0001890!2.02e-27!41;UBERON:0006240!2.02e-27!41;UBERON:0002616!6.56e-27!59;UBERON:0001869!8.86e-27!32;UBERON:0003080!1.72e-26!42;UBERON:0001893!3.76e-26!34;UBERON:0002020!4.73e-26!34;UBERON:0003528!4.73e-26!34;UBERON:0002791!6.00e-25!33;UBERON:0001017!1.30e-23!82;UBERON:0003056!6.79e-23!61;UBERON:0003075!3.66e-22!86;UBERON:0007284!3.66e-22!86;UBERON:0002619!7.06e-22!22;UBERON:0005743!9.06e-22!86;UBERON:0000073!2.60e-21!94;UBERON:0001016!2.60e-21!94;UBERON:0007023!3.64e-21!115;UBERON:0002346!1.87e-20!90;UBERON:0001950!3.01e-20!20;UBERON:0000153!2.62e-19!129;UBERON:0007811!2.62e-19!129;UBERON:0000956!1.86e-18!25;UBERON:0000203!1.86e-18!25;UBERON:0000033!2.32e-17!123;UBERON:0004121!6.17e-12!169;UBERON:0000924!2.93e-11!173;UBERON:0006601!2.93e-11!173;UBERON:0002420!6.72e-10!9;UBERON:0007245!6.72e-10!9;UBERON:0010009!6.72e-10!9;UBERON:0010011!6.72e-10!9;UBERON:0000454!6.72e-10!9;UBERON:0002308!4.25e-09!9;UBERON:0000125!4.25e-09!9;UBERON:0000200!1.50e-08!6;UBERON:0001871!6.34e-08!7;UBERON:0009663!1.45e-07!7;UBERON:0002021!2.77e-07!5;UBERON:0000369!6.99e-07!4;UBERON:0002435!6.99e-07!4;UBERON:0000204!6.99e-07!4;UBERON:0010082!6.99e-07!4;UBERON:0000349!7.30e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.75e-42;32!UBERON:0001893;1.19e-39;34!UBERON:0002791;5.00e-39;32!UBERON:0003528;5.44e-34;34!UBERON:0002020;5.44e-34;34!UBERON:0001950;1.90e-32;20!UBERON:0002780;1.62e-29;41!UBERON:0001890;1.62e-29;41!UBERON:0002619;2.07e-29;22!UBERON:0000956;9.88e-26;25!UBERON:0000203;9.88e-26;25!UBERON:0000955;8.40e-24;68!UBERON:0000073;3.29e-22;53!UBERON:0002616;3.29e-22;53!UBERON:0000369;1.07e-21;4!UBERON:0002435;1.07e-21;4!UBERON:0000204;1.07e-21;4!UBERON:0002420;8.04e-21;9!UBERON:0007245;8.04e-21;9!UBERON:0010009;8.04e-21;9!UBERON:0010011;8.04e-21;9!UBERON:0000454;8.04e-21;9!UBERON:0000200;1.77e-20;6!UBERON:0001017;2.28e-20;75!UBERON:0009663;6.06e-19;7!UBERON:0005383;1.09e-16;3!UBERON:0005382;1.09e-16;3!UBERON:0001870;1.41e-15;3!UBERON:0000125;1.12e-14;9!UBERON:0002308;1.12e-14;9!UBERON:0001016;1.91e-13;83!UBERON:0001873;1.27e-11;2!UBERON:0002702;1.17e-10;2!UBERON:0007023;2.33e-10;114!UBERON:0002021;3.39e-10;5!UBERON:0002037;9.37e-09;6!UBERON:0001871;3.45e-07;6!UBERON:0001874;9.04e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.92e-47,32;UBERON:0000073,1.14e-45,53;UBERON:0002616,1.14e-45,53;UBERON:0002780,1.57e-44,41;UBERON:0001890,1.57e-44,41;UBERON:0003080,1.57e-44,41;UBERON:0006240,1.57e-44,41;UBERON:0001893,7.25e-44,34;UBERON:0001049,5.48e-43,56;UBERON:0005068,5.48e-43,56;UBERON:0006241,5.48e-43,56;UBERON:0007135,5.48e-43,56;UBERON:0002791,1.49e-41,32;UBERON:0000955,8.16e-41,68;UBERON:0006238,8.16e-41,68;UBERON:0003528,5.89e-39,34;UBERON:0002020,5.89e-39,34;UBERON:0001017,2.05e-36,81;UBERON:0001950,1.02e-32,20;UBERON:0001016,2.78e-32,89;UBERON:0002619,1.18e-29,22;UBERON:0003056,1.11e-28,61;UBERON:0003075,7.16e-28,82;UBERON:0007284,7.16e-28,82;UBERON:0002346,2.39e-26,86;UBERON:0000956,6.01e-26,25;UBERON:0000203,6.01e-26,25;UBERON:0007023,5.94e-25,114;UBERON:0000369,9.38e-22,4;UBERON:0002435,9.38e-22,4;UBERON:0000204,9.38e-22,4;UBERON:0010082,9.38e-22,4;UBERON:0010371,6.25e-21,104;UBERON:0002420,7.40e-21,9;UBERON:0007245,7.40e-21,9;UBERON:0010009,7.40e-21,9;UBERON:0010011,7.40e-21,9;UBERON:0000454,7.40e-21,9;UBERON:0000200,1.13e-20,6;UBERON:0009663,5.97e-19,7;UBERON:0010314,5.04e-17,132;UBERON:0005383,9.33e-17,3;UBERON:0005382,9.33e-17,3;UBERON:0001870,1.05e-15,3;UBERON:0000125,1.10e-14,9;UBERON:0002308,1.10e-14,9;UBERON:0004121,2.48e-14,171;UBERON:0000924,2.48e-14,171;UBERON:0006601,2.48e-14,171;UBERON:0001873,1.12e-11,2;UBERON:0010122,1.12e-11,2;UBERON:0002702,8.72e-11,2;UBERON:0011216,1.17e-10,223;UBERON:0002021,3.45e-10,5;UBERON:0000025,4.80e-09,192;UBERON:0002037,9.50e-09,6;UBERON:0006215,9.50e-09,6;UBERON:0001871,3.38e-07,6;UBERON:0001874,8.81e-07,1 | |||
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|short_description=p8@CAMK4 | |short_description=p8@CAMK4 | ||
}} | }} |
Latest revision as of 17:08, 19 September 2015
Short description: | p8@CAMK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAMK4_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | -6bp_to_NM_001744_5end |
EntrezGene: | CAMK4 |
HGNC: | 1464 |
UniProt: | Q16566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 9.63e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.63e-11 | 2 |
naive regulatory T cell | 9.63e-11 | 2 |
CD4-positive, alpha-beta T cell | 6.19e-08 | 6 |
naive T cell | 1.93e-07 | 3 |