FFCP PHASE1:Hg19::chr18:5543961..5543982,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23136 | |EntrezGene=23136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3380 | |HGNC=3380 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2J2 | |UniProt=Q9Y2J2 | ||
|association_with_transcript=3bp_to_NM_012307,uc002kmt.1,uc002kmu.1_5end | |association_with_transcript=3bp_to_NM_012307,uc002kmt.1,uc002kmu.1_5end | ||
|cluster_id=chr18:5543961..5543982,- | |||
|description=CAGE_peak_5_at_EPB41L3_5end | |description=CAGE_peak_5_at_EPB41L3_5end | ||
|id=chr18:5543961..5543982,- | |id=chr18:5543961..5543982,- | ||
|ontology_enrichment_celltype=CL:0002057!7.53e-28!42;CL:0002009!7.43e-25!65;CL:0002194!1.34e-24!63;CL:0000576!1.34e-24!63;CL:0000040!1.34e-24!63;CL:0000559!1.34e-24!63;CL:0000860!4.62e-24!45;CL:0000557!6.33e-20!71;CL:0000839!2.62e-19!70;CL:0000766!1.35e-17!76;CL:0000763!1.68e-09!112;CL:0000049!1.68e-09!112 | |ontology_enrichment_celltype=CL:0002057!7.53e-28!42;CL:0002009!7.43e-25!65;CL:0002194!1.34e-24!63;CL:0000576!1.34e-24!63;CL:0000040!1.34e-24!63;CL:0000559!1.34e-24!63;CL:0000860!4.62e-24!45;CL:0000557!6.33e-20!71;CL:0000839!2.62e-19!70;CL:0000766!1.35e-17!76;CL:0000763!1.68e-09!112;CL:0000049!1.68e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.78e-25;33!CL:0002057;3.78e-25;33!CL:0000473;3.22e-24;39!CL:0000234;3.22e-24;39!CL:0000576;1.99e-21;48!CL:0000766;4.14e-13;69 | |ontology_enrichment_celltype_v019=CL:0000860;3.78e-25;33!CL:0002057;3.78e-25;33!CL:0000473;3.22e-24;39!CL:0000234;3.22e-24;39!CL:0000576;1.99e-21;48!CL:0000766;4.14e-13;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.18e-38,48;CL:0000234,5.18e-38,48;CL:0002194,1.16e-34,59;CL:0000576,1.16e-34,59;CL:0000040,1.16e-34,59;CL:0000559,1.16e-34,59;CL:0000860,3.00e-34,42;CL:0002057,3.00e-34,42;CL:0002009,3.81e-34,61;CL:0000557,8.78e-29,67;CL:0000839,2.69e-28,66;CL:0000766,2.59e-26,72;CL:0000763,1.64e-16,108;CL:0000049,1.64e-16,108;CL:0002087,7.74e-09,115;CL:0002393,5.70e-08,9;CL:0002397,5.70e-08,9;CL:0000738,2.57e-07,136;CL:0002031,7.81e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-24;42 | |ontology_enrichment_development_v019=CL:0002057;1.29e-24;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.27e-21!57;UBERON:0005068!1.27e-21!57;UBERON:0006241!1.27e-21!57;UBERON:0007135!1.27e-21!57;UBERON:0007023!5.49e-20!115;UBERON:0003075!1.23e-19!86;UBERON:0007284!1.23e-19!86;UBERON:0003080!1.90e-19!42;UBERON:0002780!3.39e-19!41;UBERON:0001890!3.39e-19!41;UBERON:0006240!3.39e-19!41;UBERON:0002616!8.11e-19!59;UBERON:0002346!1.08e-18!90;UBERON:0001017!5.18e-18!82;UBERON:0005743!6.64e-18!86;UBERON:0000955!1.03e-16!69;UBERON:0006238!1.03e-16!69;UBERON:0003056!1.97e-16!61;UBERON:0002020!3.87e-16!34;UBERON:0003528!3.87e-16!34;UBERON:0001893!4.64e-16!34;UBERON:0001869!7.22e-16!32;UBERON:0002371!9.18e-16!80;UBERON:0000073!1.00e-15!94;UBERON:0001016!1.00e-15!94;UBERON:0004765!1.03e-15!101;UBERON:0001434!1.03e-15!101;UBERON:0002791!2.16e-15!33;UBERON:0001474!5.19e-15!86;UBERON:0000468!9.20e-14!659;UBERON:0000467!9.71e-14!625;UBERON:0002619!1.06e-13!22;UBERON:0000480!1.62e-13!626;UBERON:0000956!3.69e-13!25;UBERON:0000203!3.69e-13!25;UBERON:0001950!1.10e-12!20;UBERON:0002390!1.26e-12!102;UBERON:0003061!1.26e-12!102;UBERON:0002193!1.46e-12!112;UBERON:0000033!3.87e-11!123;UBERON:0003081!4.92e-11!216;UBERON:0000153!5.35e-11!129;UBERON:0007811!5.35e-11!129;UBERON:0000062!3.02e-10!511;UBERON:0000479!6.40e-10!787;UBERON:0002405!9.96e-10!115;UBERON:0002050!1.20e-09!605;UBERON:0005423!1.20e-09!605;UBERON:0000922!1.75e-09!612;UBERON:0002204!1.75e-09!167;UBERON:0000923!2.13e-09!604;UBERON:0005291!2.13e-09!604;UBERON:0006598!2.13e-09!604;UBERON:0002532!2.13e-09!604;UBERON:0000025!1.09e-08!194;UBERON:0004121!1.73e-08!169;UBERON:0000924!2.97e-08!173;UBERON:0006601!2.97e-08!173 | |ontology_enrichment_uberon=UBERON:0001049!1.27e-21!57;UBERON:0005068!1.27e-21!57;UBERON:0006241!1.27e-21!57;UBERON:0007135!1.27e-21!57;UBERON:0007023!5.49e-20!115;UBERON:0003075!1.23e-19!86;UBERON:0007284!1.23e-19!86;UBERON:0003080!1.90e-19!42;UBERON:0002780!3.39e-19!41;UBERON:0001890!3.39e-19!41;UBERON:0006240!3.39e-19!41;UBERON:0002616!8.11e-19!59;UBERON:0002346!1.08e-18!90;UBERON:0001017!5.18e-18!82;UBERON:0005743!6.64e-18!86;UBERON:0000955!1.03e-16!69;UBERON:0006238!1.03e-16!69;UBERON:0003056!1.97e-16!61;UBERON:0002020!3.87e-16!34;UBERON:0003528!3.87e-16!34;UBERON:0001893!4.64e-16!34;UBERON:0001869!7.22e-16!32;UBERON:0002371!9.18e-16!80;UBERON:0000073!1.00e-15!94;UBERON:0001016!1.00e-15!94;UBERON:0004765!1.03e-15!101;UBERON:0001434!1.03e-15!101;UBERON:0002791!2.16e-15!33;UBERON:0001474!5.19e-15!86;UBERON:0000468!9.20e-14!659;UBERON:0000467!9.71e-14!625;UBERON:0002619!1.06e-13!22;UBERON:0000480!1.62e-13!626;UBERON:0000956!3.69e-13!25;UBERON:0000203!3.69e-13!25;UBERON:0001950!1.10e-12!20;UBERON:0002390!1.26e-12!102;UBERON:0003061!1.26e-12!102;UBERON:0002193!1.46e-12!112;UBERON:0000033!3.87e-11!123;UBERON:0003081!4.92e-11!216;UBERON:0000153!5.35e-11!129;UBERON:0007811!5.35e-11!129;UBERON:0000062!3.02e-10!511;UBERON:0000479!6.40e-10!787;UBERON:0002405!9.96e-10!115;UBERON:0002050!1.20e-09!605;UBERON:0005423!1.20e-09!605;UBERON:0000922!1.75e-09!612;UBERON:0002204!1.75e-09!167;UBERON:0000923!2.13e-09!604;UBERON:0005291!2.13e-09!604;UBERON:0006598!2.13e-09!604;UBERON:0002532!2.13e-09!604;UBERON:0000025!1.09e-08!194;UBERON:0004121!1.73e-08!169;UBERON:0000924!2.97e-08!173;UBERON:0006601!2.97e-08!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.36e-16;22!UBERON:0001869;7.20e-16;32!UBERON:0002780;1.00e-15;41!UBERON:0001890;1.00e-15;41!UBERON:0001893;1.89e-15;34!UBERON:0003528;1.95e-15;34!UBERON:0002020;1.95e-15;34!UBERON:0001950;2.37e-15;20!UBERON:0002791;2.82e-15;32!UBERON:0000956;1.67e-14;25!UBERON:0000203;1.67e-14;25!UBERON:0000073;2.08e-13;53!UBERON:0002616;2.08e-13;53!UBERON:0000955;7.18e-09;68!UBERON:0001017;2.37e-08;75!UBERON:0001016;1.01e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0002619;1.36e-16;22!UBERON:0001869;7.20e-16;32!UBERON:0002780;1.00e-15;41!UBERON:0001890;1.00e-15;41!UBERON:0001893;1.89e-15;34!UBERON:0003528;1.95e-15;34!UBERON:0002020;1.95e-15;34!UBERON:0001950;2.37e-15;20!UBERON:0002791;2.82e-15;32!UBERON:0000956;1.67e-14;25!UBERON:0000203;1.67e-14;25!UBERON:0000073;2.08e-13;53!UBERON:0002616;2.08e-13;53!UBERON:0000955;7.18e-09;68!UBERON:0001017;2.37e-08;75!UBERON:0001016;1.01e-07;83 | ||
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| ||
|short_description=p5@EPB41L3 | |short_description=p5@EPB41L3 | ||
}} | }} |
Latest revision as of 22:51, 19 September 2015
Short description: | p5@EPB41L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EPB41L3_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_NM_012307, uc002kmt.1, uc002kmu.1_5end |
EntrezGene: | EPB41L3 |
HGNC: | 3380 |
UniProt: | Q9Y2J2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.18e-38 | 48 |
phagocyte | 5.18e-38 | 48 |
monopoietic cell | 1.16e-34 | 59 |
monocyte | 1.16e-34 | 59 |
monoblast | 1.16e-34 | 59 |
promonocyte | 1.16e-34 | 59 |
classical monocyte | 3.00e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.00e-34 | 42 |
macrophage dendritic cell progenitor | 3.81e-34 | 61 |
granulocyte monocyte progenitor cell | 8.78e-29 | 67 |
myeloid lineage restricted progenitor cell | 2.69e-28 | 66 |
myeloid leukocyte | 2.59e-26 | 72 |
myeloid cell | 1.64e-16 | 108 |
common myeloid progenitor | 1.64e-16 | 108 |
nongranular leukocyte | 7.74e-09 | 115 |
intermediate monocyte | 5.70e-08 | 9 |
CD14-positive, CD16-positive monocyte | 5.70e-08 | 9 |
leukocyte | 2.57e-07 | 136 |
hematopoietic lineage restricted progenitor cell | 7.81e-07 | 120 |