FFCP PHASE1:Hg19::chrX:153095982..153096013,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57595 | |EntrezGene=57595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21167 | |HGNC=21167 | ||
|TSSclassifier=strong | |||
|UniProt=Q76G19 | |UniProt=Q76G19 | ||
|association_with_transcript=0bp_to_NM_032512,uc004fix.2,uc004fiz.1,uc004fja.1,uc011mze.1_5end | |association_with_transcript=0bp_to_NM_032512,uc004fix.2,uc004fiz.1,uc004fja.1,uc011mze.1_5end | ||
|cluster_id=chrX:153095982..153096013,- | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_2_at_PDZD4_5end | |description=CAGE_peak_2_at_PDZD4_5end | ||
|id=chrX:153095982..153096013,- | |id=chrX:153095982..153096013,- | ||
|ontology_enrichment_celltype=CL:0002319!5.84e-11!25;CL:0002322!1.41e-07!5;CL:0000133!2.21e-07!59 | |ontology_enrichment_celltype=CL:0002319!5.84e-11!25;CL:0002322!1.41e-07!5;CL:0000133!2.21e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.31e-15;5!CL:0000540;6.25e-13;6!CL:0000404;6.25e-13;6!CL:0002321;8.53e-12;15!CL:0002319;2.20e-07;25!CL:0000039;3.07e-07;7!CL:0000586;3.07e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.20e-15,5;CL:0000047,4.64e-13,8;CL:0000540,8.17e-13,6;CL:0000031,8.17e-13,6;CL:0000404,8.17e-13,6;CL:0000133,1.73e-07,59;CL:0002319,2.37e-07,25;CL:0000039,2.83e-07,7;CL:0000586,2.83e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.67e-13;82!CL:0000031;6.25e-13;6!UBERON:0006215;2.60e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.08e-07;22!DOID:2994;1.08e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.03e-07,22;DOID:2994,1.03e-07,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;2.18e-26;53!UBERON:0002616;2.18e-26;53!UBERON:0001893;2.86e-25;34!UBERON:0002791;9.93e-24;32!UBERON:0001869;3.92e-23;32!UBERON:0002780;8.05e-23;41!UBERON:0001890;8.05e-23;41!UBERON:0003528;3.32e-22;34!UBERON:0002020;3.32e-22;34!UBERON:0001950;1.78e-19;20!UBERON:0000956;8.10e-18;25!UBERON:0000203;8.10e-18;25!UBERON:0002619;1.63e-17;22!UBERON:0001016;7.24e-17;83!UBERON:0000955;9.98e-17;68!UBERON:0001017;8.81e-16;75!UBERON:0002021;2.78e-14;5!UBERON:0004733;5.71e-14;12!UBERON:0002028;5.71e-14;12!UBERON:0002420;6.89e-14;9!UBERON:0007245;6.89e-14;9!UBERON:0010009;6.89e-14;9!UBERON:0010011;6.89e-14;9!UBERON:0000454;6.89e-14;9!UBERON:0004732;8.73e-13;13!UBERON:0002298;1.13e-11;6!UBERON:0000369;4.22e-11;4!UBERON:0002435;4.22e-11;4!UBERON:0000204;4.22e-11;4!UBERON:0000125;2.59e-10;9!UBERON:0002308;2.59e-10;9!UBERON:0009663;1.60e-09;7!UBERON:0001896;4.66e-09;3!UBERON:0005290;4.66e-09;3!UBERON:0005383;9.61e-09;3!UBERON:0005382;9.61e-09;3!UBERON:0000922;6.54e-08;49!UBERON:0002680;8.53e-08;9!UBERON:0001895;8.53e-08;9!UBERON:0007023;8.76e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.32e-54,89;UBERON:0001017,2.67e-52,81;UBERON:0001049,2.12e-44,56;UBERON:0005068,2.12e-44,56;UBERON:0006241,2.12e-44,56;UBERON:0007135,2.12e-44,56;UBERON:0000073,3.80e-44,53;UBERON:0002616,3.80e-44,53;UBERON:0000955,1.00e-39,68;UBERON:0006238,1.00e-39,68;UBERON:0003075,7.21e-32,82;UBERON:0007284,7.21e-32,82;UBERON:0002780,3.38e-31,41;UBERON:0001890,3.38e-31,41;UBERON:0003080,3.38e-31,41;UBERON:0006240,3.38e-31,41;UBERON:0002346,5.71e-30,86;UBERON:0001893,7.16e-29,34;UBERON:0003528,4.71e-26,34;UBERON:0002020,4.71e-26,34;UBERON:0004121,1.07e-25,171;UBERON:0000924,1.07e-25,171;UBERON:0006601,1.07e-25,171;UBERON:0002791,4.40e-25,32;UBERON:0001869,4.75e-25,32;UBERON:0010371,6.62e-25,104;UBERON:0003056,4.73e-23,61;UBERON:0011216,4.44e-20,223;UBERON:0001950,2.76e-19,20;UBERON:0010314,1.16e-17,132;UBERON:0000956,1.21e-17,25;UBERON:0000203,1.21e-17,25;UBERON:0002619,2.43e-17,22;UBERON:0007023,2.62e-16,114;UBERON:0004733,3.33e-14,12;UBERON:0002028,3.33e-14,12;UBERON:0007277,3.33e-14,12;UBERON:0003076,4.59e-14,15;UBERON:0003057,4.59e-14,15;UBERON:0002021,5.15e-14,5;UBERON:0002420,1.13e-13,9;UBERON:0007245,1.13e-13,9;UBERON:0010009,1.13e-13,9;UBERON:0010011,1.13e-13,9;UBERON:0000454,1.13e-13,9;UBERON:0004732,5.33e-13,13;UBERON:0002298,1.08e-11,6;UBERON:0000369,6.08e-11,4;UBERON:0002435,6.08e-11,4;UBERON:0000204,6.08e-11,4;UBERON:0010082,6.08e-11,4;UBERON:0000125,4.64e-10,9;UBERON:0002308,4.64e-10,9;UBERON:0000025,2.31e-09,192;UBERON:0009663,2.72e-09,7;UBERON:0001896,4.14e-09,3;UBERON:0005290,4.14e-09,3;UBERON:0010096,4.14e-09,3;UBERON:0005383,1.44e-08,3;UBERON:0005382,1.44e-08,3;UBERON:0002680,5.81e-08,9;UBERON:0001895,5.81e-08,9;UBERON:0010092,5.81e-08,9 | |||
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| ||
|short_description=p2@PDZD4 | |short_description=p2@PDZD4 | ||
}} | }} |
Latest revision as of 01:00, 20 September 2015
Short description: | p2@PDZD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PDZD4_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_NM_032512, uc004fix.2, uc004fiz.1, uc004fja.1, uc011mze.1_5end |
EntrezGene: | PDZD4 |
HGNC: | 21167 |
UniProt: | Q76G19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.20e-15 | 5 |
neuronal stem cell | 4.64e-13 | 8 |
neuron | 8.17e-13 | 6 |
neuroblast | 8.17e-13 | 6 |
electrically signaling cell | 8.17e-13 | 6 |
neurectodermal cell | 1.73e-07 | 59 |
neural cell | 2.37e-07 | 25 |
germ line cell | 2.83e-07 | 7 |
germ cell | 2.83e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.03e-07 | 22 |
germ cell cancer | 1.03e-07 | 22 |