FFCP PHASE1:Hg19::chr12:6809958..6809996,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196500 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25338 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IYJ0,E9PCC5,F5H3A9 | |||
|association_with_transcript=0bp_to_ENST00000320591,ENST00000439553,ENST00000534837,ENST00000541423_5end | |||
|cluster_id=chr12:6809958..6809996,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_C12orf53_5end | |||
|id=chr12:6809958..6809996,- | |||
|ontology_enrichment_celltype=CL:0000055!3.89e-14!180;CL:0000393!9.53e-11!60;CL:0000211!9.53e-11!60;CL:0000183!8.60e-10!59;CL:0002319!1.08e-09!25;CL:0000187!5.49e-09!54;CL:0000192!1.16e-08!42;CL:0000514!1.16e-08!42;CL:0000680!1.13e-07!57;CL:0000056!1.13e-07!57;CL:0000355!1.13e-07!57;CL:0000359!2.57e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.87e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.95e-10,25;CL:0000393,8.60e-10,61;CL:0000211,8.60e-10,61;CL:0000192,5.64e-09,43;CL:0000514,5.64e-09,43;CL:0000187,4.56e-08,55;CL:0000680,3.64e-07,58;CL:0000056,3.64e-07,58;CL:0000355,3.64e-07,58;CL:0000359,4.57e-07,32;CL:0000095,8.66e-07,17;CL:0000123,8.66e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.08e-14;82!UBERON:0006238;5.62e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.36e-44!94;UBERON:0001016!1.36e-44!94;UBERON:0005743!3.19e-44!86;UBERON:0001017!7.36e-43!82;UBERON:0001049!4.42e-37!57;UBERON:0005068!4.42e-37!57;UBERON:0006241!4.42e-37!57;UBERON:0007135!4.42e-37!57;UBERON:0000955!2.54e-36!69;UBERON:0006238!2.54e-36!69;UBERON:0002346!1.00e-35!90;UBERON:0003075!1.61e-35!86;UBERON:0007284!1.61e-35!86;UBERON:0002616!2.69e-31!59;UBERON:0002780!7.00e-29!41;UBERON:0001890!7.00e-29!41;UBERON:0006240!7.00e-29!41;UBERON:0003080!1.44e-27!42;UBERON:0000924!5.95e-26!173;UBERON:0006601!5.95e-26!173;UBERON:0004121!2.22e-25!169;UBERON:0003056!2.42e-25!61;UBERON:0002020!8.77e-25!34;UBERON:0003528!8.77e-25!34;UBERON:0001893!9.10e-25!34;UBERON:0002791!4.86e-24!33;UBERON:0000033!1.05e-23!123;UBERON:0001869!1.24e-23!32;UBERON:0007023!4.45e-23!115;UBERON:0000153!2.32e-22!129;UBERON:0007811!2.32e-22!129;UBERON:0000956!1.28e-18!25;UBERON:0000203!1.28e-18!25;UBERON:0000025!1.29e-18!194;UBERON:0000475!2.17e-18!365;UBERON:0002619!3.73e-17!22;UBERON:0000481!5.45e-17!347;UBERON:0001950!9.57e-16!20;UBERON:0000119!1.34e-15!312;UBERON:0000483!3.20e-15!309;UBERON:0004111!1.41e-13!241;UBERON:0000477!2.12e-12!286;UBERON:0000922!8.16e-11!612;UBERON:0003076!1.78e-10!15;UBERON:0003057!1.78e-10!15;UBERON:0000468!9.44e-10!659;UBERON:0002050!4.85e-09!605;UBERON:0005423!4.85e-09!605;UBERON:0000923!8.65e-09!604;UBERON:0005291!8.65e-09!604;UBERON:0006598!8.65e-09!604;UBERON:0002532!8.65e-09!604;UBERON:0004732!9.26e-09!13;UBERON:0004733!1.20e-08!12;UBERON:0002028!1.20e-08!12;UBERON:0007277!1.20e-08!12;UBERON:0000467!1.56e-08!625;UBERON:0000480!2.26e-08!626;UBERON:0002420!9.14e-08!9;UBERON:0007245!9.14e-08!9;UBERON:0010009!9.14e-08!9;UBERON:0010011!9.14e-08!9;UBERON:0000454!9.14e-08!9;UBERON:0002308!1.34e-07!9;UBERON:0000125!1.34e-07!9;UBERON:0000064!1.62e-07!219;UBERON:0002385!1.93e-07!63;UBERON:0001015!1.93e-07!63;UBERON:0000383!1.93e-07!63;UBERON:0001134!4.04e-07!61;UBERON:0002036!4.04e-07!61;UBERON:0003082!4.04e-07!61;UBERON:0002680!7.64e-07!9;UBERON:0001895!7.64e-07!9;UBERON:0010092!7.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.94e-29;32!UBERON:0001893;1.13e-28;34!UBERON:0003528;1.25e-28;34!UBERON:0002020;1.25e-28;34!UBERON:0002791;1.45e-28;32!UBERON:0002780;7.74e-28;41!UBERON:0001890;7.74e-28;41!UBERON:0000073;8.76e-28;53!UBERON:0002616;8.76e-28;53!UBERON:0000956;7.69e-25;25!UBERON:0000203;7.69e-25;25!UBERON:0002619;6.02e-23;22!UBERON:0000955;1.10e-21;68!UBERON:0001017;3.00e-21;75!UBERON:0001950;5.13e-21;20!UBERON:0001016;1.80e-19;83!UBERON:0004732;1.84e-11;13!UBERON:0004733;2.65e-11;12!UBERON:0002028;2.65e-11;12!UBERON:0002420;4.72e-10;9!UBERON:0007245;4.72e-10;9!UBERON:0010009;4.72e-10;9!UBERON:0010011;4.72e-10;9!UBERON:0000454;4.72e-10;9!UBERON:0000125;8.06e-10;9!UBERON:0002308;8.06e-10;9!UBERON:0002680;7.71e-09;9!UBERON:0001895;7.71e-09;9!UBERON:0011216;1.26e-08;132!UBERON:0009663;4.67e-08;7!UBERON:0007023;6.91e-08;114!UBERON:0010314;7.43e-08;132!UBERON:0001871;1.36e-07;6!UBERON:0000200;1.69e-07;6!UBERON:0001894;6.02e-07;7 | |||
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|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0.737201809504527,0.697801167972428,0,0.263766978228454,1.36142988256051,1.65698687863958,1.34465029290355,1.80808358407193,0.730310090387373,4.39139518911456,5.66356867153224,2.04000691244253,4.38836610069323,6.86966369114536,6.84372125364421,2.88748071068046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.786839080455332,1.57204305099666,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593146252648242,0.535081656179426,0,0,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0.383959833463255,0,0,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0.670700859703636,0.383587685530591,0,0,1.15877215168659,0.795285947051099,0.973269740605272,1.51255707462509,1.33037638477538,1.49319135678314,9.62696204908188,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.732806975721629,0,0,0,0.993943903390637,0.759783069987479,1.72131935057184,2.0078563452417,0.354668382198357,1.12135520028461,3.20246987189115,2.22000793575444,1.55605517699883,0.134710672069688,0,0.756787138224657,0.576175924479999,1.87457145467037,0.312160076830321,0,0,1.05691048779388,0.323745888736263,0.280901613404497,0,0.737005903870608,0.619954687054593,0,0.247266929278557,1.82032272387605,0.718618141816238,0.841680569770331,1.25118519871964,0.554128230968366,0,0.30648779579902,0.45071417671979,0.340296549480063,0,0.85422955527427,0.847727604638247,0.300091096084402,1.23663035086127,0.515281080091258,0.930584281657949,1.18143432568886,1.36411807225678,0.757301322732344,1.93304787148829,4.52608959092673,0.710019185033229,0.604512589365842,1.18692414617341,0,0,0,2.5614478287215,2.51806559810822,2.44007280025989,2.798848485415,0.756962552626885,1.09493207722749,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,5.88034845542168,0,0,0,0,0.245976877086227,2.74508496477641,0,0,0,0,0,0,0,3.4779121492523,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0.381988425558278,0,1.71072446022705,0.308482478109971,0,0,0.784917590417525,2.1798003441664,0.1466765716419,0.904902010304444,0,0,1.59562869950922,1.04007436911366,0,0,0.266422179016099,0.857867961948885,1.62786481617433,0,0,0.710783897485092,0,2.1100756394171,1.74306691720059,0.99972991182057,0,0,0,0.239624855491583,2.29723871668228,2.85273810081437,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,13.2129204595681,19.5209780786433,6.18631050222156,14.5739150840883,3.82763250991898,0,0,0,2.33113834266366,0.500170521059677,0.271265023699736,0,0.178428988797162,0,1.28855556491985,3.00946099727719,2.27407504055985,2.0694614258501,0,1.47495334833363,1.56390506042549,2.93701736194111,4.11772108573027,0.413536052245775,0,0.426910231213777,0,0,0,0,0,0,1.28139149255701,0,0.160853921143607,0,0.154209693802656,0.532685175939381,0.492762936082855,0,0.116210378459959,0.120859449591622,0,0,0.229628896329213,0.182091168006717,0.524497659837696,0,0.231046011313244,0.784349769176855,0,0.949964660035881,0,0,0.431831832204279,0,1.89662506280697,2.00675909541941,0,0,0.223874754722178,0,0,1.79515087581472,1.31205858279882,1.62689197332152,0.618246069886334,0.366277859273374,0.247528499761764,1.72279661398852,0,0,1.54673149267395,0,0.307007349452259,0.689182862422653,1.39646318328756,2.17525040871343,0.340906509664404,1.69160867728801,0,0,0,0,4.64845549297286,4.09256050879832,9.0614845120878,0.308033580176089,2.66153015158511,4.34966496037536,5.37440235401368,0.286249773483982,0,0,0,1.535386747868,1.28381696410176,5.40945521474092,2.35484592059769,1.07923474549989,1.92175920815238,1.06031162111118,2.62837226045311,3.17020642346017,1.68503382495592,1.46290121726877,0.731140468893853,3.16950440270266,1.50149902548784,0,4.52032466480971,8.82184549673799,4.64407282668854,0.438450885253763,5.20897980840019,1.9676842561399,1.42037263873893,1.8589409885985,2.25356482025793,0.286822704408103,0.0982490410131212,3.92338156629375,0.354761064070598,0.633322905892992,0.329294892959902,0,3.14941248220485,0,0,0,0.564862804660675,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,4.27296284509893,1.92495971052672,0.245040215981032,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76217617423492,0,0,0,0,0,63.6254494570431,100.859971566338,2.11486539543521,0,12.8786498958076,11.556383318562,1.65770349318689,0,1.94310496754094,0,0.311039587661807,0,0,0,0.986434056369336,0,0,41.6813080820944,58.3511337438044,39.9227596002388,0,0,0,0,0,0,1.37897349296586,0.583209226766509,6.25049981759852,43.4013279048781,110.104548464997,44.2487035319541,105.050296934663,30.4414047522154,46.2903187994882,0,0,4.07836370070124,0,0,0,0,0,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0.995261931078505,1.06149077404007,2.4441205797345,0,0,0,9.0991529523914,4.01288823649394,30.4543779442941,0.182454789215666,0.195664618932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| |||
|short_description=p1@C12orf53 | |||
}} |
Latest revision as of 01:50, 20 September 2015
Short description: | p1@C12orf53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf53_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000320591, ENST00000439553, ENST00000534837, ENST00000541423_5end |
EntrezGene: | C12orf53 |
HGNC: | 25338 |
UniProt: | Q8IYJ0E9PCC5F5H3A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.95e-10 | 25 |
electrically responsive cell | 8.60e-10 | 61 |
electrically active cell | 8.60e-10 | 61 |
smooth muscle cell | 5.64e-09 | 43 |
smooth muscle myoblast | 5.64e-09 | 43 |
muscle cell | 4.56e-08 | 55 |
muscle precursor cell | 3.64e-07 | 58 |
myoblast | 3.64e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.64e-07 | 58 |
vascular associated smooth muscle cell | 4.57e-07 | 32 |
neuron associated cell | 8.66e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.66e-07 | 17 |