FFCP PHASE1:Hg19::chr5:130506629..130506700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90624 | |EntrezGene=90624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28072 | |HGNC=28072 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBV5,D6R994,Q5U5X0 | |UniProt=D6RBV5,D6R994,Q5U5X0 | ||
|association_with_transcript=0bp_to_ENST00000507584,ENST00000510516,NM_181705,uc003kvg.1_5end | |association_with_transcript=0bp_to_ENST00000507584,ENST00000510516,NM_181705,uc003kvg.1_5end | ||
|cluster_id=chr5:130506629..130506700,+ | |||
|description=CAGE_peak_1_at_LYRM7_5end | |description=CAGE_peak_1_at_LYRM7_5end | ||
|id=chr5:130506629..130506700,+ | |id=chr5:130506629..130506700,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.75e-09!53;CL:0000051!3.75e-09!53;CL:0000838!9.79e-09!52 | |ontology_enrichment_celltype=CL:0000542!3.75e-09!53;CL:0000051!3.75e-09!53;CL:0000838!9.79e-09!52 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.75e-09,53;CL:0000051,3.75e-09,53;CL:0000838,9.79e-09,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.35e-07;82 | ||
|ontology_enrichment_disease=DOID:2531!1.82e-16!51;DOID:0060083!1.82e-16!51;DOID:1240!2.39e-12!39;DOID:162!4.28e-11!235;DOID:14566!8.01e-11!239;DOID:8692!1.31e-09!31;DOID:0050686!3.34e-07!137 | |ontology_enrichment_disease=DOID:2531!1.82e-16!51;DOID:0060083!1.82e-16!51;DOID:1240!2.39e-12!39;DOID:162!4.28e-11!235;DOID:14566!8.01e-11!239;DOID:8692!1.31e-09!31;DOID:0050686!3.34e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:2531;3.27e-10;51!DOID:0060083;3.27e-10;51!DOID:1240;6.59e-10;39!DOID:8692;1.59e-09;31 | |ontology_enrichment_disease_v019=DOID:2531;3.27e-10;51!DOID:0060083;3.27e-10;51!DOID:1240;6.59e-10;39!DOID:8692;1.59e-09;31 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.82e-16,51;DOID:0060083,1.82e-16,51;DOID:1240,2.39e-12,39;DOID:162,4.28e-11,235;DOID:14566,8.01e-11,239;DOID:8692,1.31e-09,31;DOID:0050686,3.34e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.34e-22!57;UBERON:0005068!2.34e-22!57;UBERON:0006241!2.34e-22!57;UBERON:0007135!2.34e-22!57;UBERON:0002780!1.35e-20!41;UBERON:0001890!1.35e-20!41;UBERON:0006240!1.35e-20!41;UBERON:0003080!3.15e-20!42;UBERON:0001017!5.86e-20!82;UBERON:0007023!7.96e-20!115;UBERON:0005743!7.04e-19!86;UBERON:0000073!9.68e-19!94;UBERON:0001016!9.68e-19!94;UBERON:0002616!1.29e-18!59;UBERON:0000955!2.01e-17!69;UBERON:0006238!2.01e-17!69;UBERON:0001893!4.77e-17!34;UBERON:0002020!4.85e-17!34;UBERON:0003528!4.85e-17!34;UBERON:0002791!1.93e-16!33;UBERON:0001869!4.03e-16!32;UBERON:0002346!7.75e-14!90;UBERON:0003075!8.31e-14!86;UBERON:0007284!8.31e-14!86;UBERON:0002619!5.95e-13!22;UBERON:0000956!5.00e-12!25;UBERON:0000203!5.00e-12!25;UBERON:0003056!8.93e-12!61;UBERON:0001950!1.08e-11!20;UBERON:0000153!6.26e-11!129;UBERON:0007811!6.26e-11!129;UBERON:0000033!1.06e-09!123;UBERON:0000924!6.08e-08!173;UBERON:0006601!6.08e-08!173;UBERON:0004121!9.03e-08!169;UBERON:0002420!7.30e-07!9;UBERON:0007245!7.30e-07!9;UBERON:0010009!7.30e-07!9;UBERON:0010011!7.30e-07!9;UBERON:0000454!7.30e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!2.34e-22!57;UBERON:0005068!2.34e-22!57;UBERON:0006241!2.34e-22!57;UBERON:0007135!2.34e-22!57;UBERON:0002780!1.35e-20!41;UBERON:0001890!1.35e-20!41;UBERON:0006240!1.35e-20!41;UBERON:0003080!3.15e-20!42;UBERON:0001017!5.86e-20!82;UBERON:0007023!7.96e-20!115;UBERON:0005743!7.04e-19!86;UBERON:0000073!9.68e-19!94;UBERON:0001016!9.68e-19!94;UBERON:0002616!1.29e-18!59;UBERON:0000955!2.01e-17!69;UBERON:0006238!2.01e-17!69;UBERON:0001893!4.77e-17!34;UBERON:0002020!4.85e-17!34;UBERON:0003528!4.85e-17!34;UBERON:0002791!1.93e-16!33;UBERON:0001869!4.03e-16!32;UBERON:0002346!7.75e-14!90;UBERON:0003075!8.31e-14!86;UBERON:0007284!8.31e-14!86;UBERON:0002619!5.95e-13!22;UBERON:0000956!5.00e-12!25;UBERON:0000203!5.00e-12!25;UBERON:0003056!8.93e-12!61;UBERON:0001950!1.08e-11!20;UBERON:0000153!6.26e-11!129;UBERON:0007811!6.26e-11!129;UBERON:0000033!1.06e-09!123;UBERON:0000924!6.08e-08!173;UBERON:0006601!6.08e-08!173;UBERON:0004121!9.03e-08!169;UBERON:0002420!7.30e-07!9;UBERON:0007245!7.30e-07!9;UBERON:0010009!7.30e-07!9;UBERON:0010011!7.30e-07!9;UBERON:0000454!7.30e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.64e-15;41!UBERON:0001890;4.64e-15;41!UBERON:0001869;1.46e-14;32!UBERON:0003528;1.47e-14;34!UBERON:0002020;1.47e-14;34!UBERON:0001893;1.51e-14;34!UBERON:0002791;1.65e-14;32!UBERON:0002619;5.99e-13;22!UBERON:0000073;1.34e-12;53!UBERON:0002616;1.34e-12;53!UBERON:0000956;4.96e-12;25!UBERON:0000203;4.96e-12;25!UBERON:0001950;1.10e-11;20!UBERON:0000955;2.24e-08;68!UBERON:0001017;2.74e-08;75!UBERON:0001016;1.10e-07;83!UBERON:0002420;7.42e-07;9!UBERON:0007245;7.42e-07;9!UBERON:0010009;7.42e-07;9!UBERON:0010011;7.42e-07;9!UBERON:0000454;7.42e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002780;4.64e-15;41!UBERON:0001890;4.64e-15;41!UBERON:0001869;1.46e-14;32!UBERON:0003528;1.47e-14;34!UBERON:0002020;1.47e-14;34!UBERON:0001893;1.51e-14;34!UBERON:0002791;1.65e-14;32!UBERON:0002619;5.99e-13;22!UBERON:0000073;1.34e-12;53!UBERON:0002616;1.34e-12;53!UBERON:0000956;4.96e-12;25!UBERON:0000203;4.96e-12;25!UBERON:0001950;1.10e-11;20!UBERON:0000955;2.24e-08;68!UBERON:0001017;2.74e-08;75!UBERON:0001016;1.10e-07;83!UBERON:0002420;7.42e-07;9!UBERON:0007245;7.42e-07;9!UBERON:0010009;7.42e-07;9!UBERON:0010011;7.42e-07;9!UBERON:0000454;7.42e-07;9 | ||
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| ||
|short_description=p1@LYRM7 | |short_description=p1@LYRM7 | ||
}} | }} |
Latest revision as of 03:28, 20 September 2015
Short description: | p1@LYRM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYRM7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000507584, ENST00000510516, NM_181705, uc003kvg.1_5end |
EntrezGene: | LYRM7 |
HGNC: | 28072 |
UniProt: | D6RBV5D6R994Q5U5X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.75e-09 | 53 |
common lymphoid progenitor | 3.75e-09 | 53 |
lymphoid lineage restricted progenitor cell | 9.79e-09 | 52 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.82e-16 | 51 |
immune system cancer | 1.82e-16 | 51 |
leukemia | 2.39e-12 | 39 |
cancer | 4.28e-11 | 235 |
disease of cellular proliferation | 8.01e-11 | 239 |
myeloid leukemia | 1.31e-09 | 31 |
organ system cancer | 3.34e-07 | 137 |