FFCP PHASE1:Hg19::chr14:55034694..55034717,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23034 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23023 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=344bp_to_ENST00000555112_5end | |||
|cluster_id=chr14:55034694..55034717,+ | |||
|description=CAGE_peak_2_at_SAMD4A_5end | |||
|id=chr14:55034694..55034717,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.90e-09;3!UBERON:0003057;5.90e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.45e-19!57;UBERON:0005068!1.45e-19!57;UBERON:0006241!1.45e-19!57;UBERON:0007135!1.45e-19!57;UBERON:0001017!1.40e-18!82;UBERON:0002616!1.74e-17!59;UBERON:0005743!5.68e-17!86;UBERON:0000073!6.10e-16!94;UBERON:0001016!6.10e-16!94;UBERON:0000955!9.50e-16!69;UBERON:0006238!9.50e-16!69;UBERON:0007023!1.37e-14!115;UBERON:0003075!2.23e-14!86;UBERON:0007284!2.23e-14!86;UBERON:0002780!3.10e-14!41;UBERON:0001890!3.10e-14!41;UBERON:0006240!3.10e-14!41;UBERON:0003080!1.86e-13!42;UBERON:0002020!3.44e-13!34;UBERON:0003528!3.44e-13!34;UBERON:0002346!4.95e-13!90;UBERON:0001893!6.37e-13!34;UBERON:0002791!1.73e-12!33;UBERON:0001869!1.10e-11!32;UBERON:0000119!1.10e-10!312;UBERON:0000477!2.51e-10!286;UBERON:0003056!3.86e-10!61;UBERON:0000025!4.50e-10!194;UBERON:0000483!4.72e-10!309;UBERON:0000475!1.20e-09!365;UBERON:0004111!1.58e-09!241;UBERON:0004121!6.46e-09!169;UBERON:0000033!8.78e-09!123;UBERON:0000467!1.19e-08!625;UBERON:0000468!1.61e-08!659;UBERON:0000480!1.75e-08!626;UBERON:0000924!2.73e-08!173;UBERON:0006601!2.73e-08!173;UBERON:0000956!3.20e-08!25;UBERON:0000203!3.20e-08!25;UBERON:0002619!3.65e-08!22;UBERON:0000153!3.79e-08!129;UBERON:0007811!3.79e-08!129;UBERON:0003076!1.69e-07!15;UBERON:0003057!1.69e-07!15;UBERON:0000064!3.09e-07!219;UBERON:0000481!5.99e-07!347;UBERON:0001950!6.15e-07!20;UBERON:0002308!6.17e-07!9;UBERON:0000125!6.17e-07!9;UBERON:0002420!6.75e-07!9;UBERON:0007245!6.75e-07!9;UBERON:0010009!6.75e-07!9;UBERON:0010011!6.75e-07!9;UBERON:0000454!6.75e-07!9;UBERON:0000062!8.27e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;5.22e-16;6!UBERON:0000073;6.12e-13;53!UBERON:0002616;6.12e-13;53!UBERON:0000349;1.10e-12;5!UBERON:0000125;1.31e-12;9!UBERON:0002308;1.31e-12;9!UBERON:0002420;1.61e-12;9!UBERON:0007245;1.61e-12;9!UBERON:0010009;1.61e-12;9!UBERON:0010011;1.61e-12;9!UBERON:0000454;1.61e-12;9!UBERON:0004732;6.82e-12;13!UBERON:0003528;1.42e-11;34!UBERON:0002020;1.42e-11;34!UBERON:0002780;1.33e-10;41!UBERON:0001890;1.33e-10;41!UBERON:0002791;5.26e-10;32!UBERON:0004733;6.63e-10;12!UBERON:0002028;6.63e-10;12!UBERON:0001893;8.02e-10;34!UBERON:0002240;5.90e-09;3!UBERON:0005174;5.90e-09;3!UBERON:0001137;5.90e-09;3!UBERON:0000988;7.32e-09;3!UBERON:0001896;7.70e-09;3!UBERON:0005290;7.70e-09;3!UBERON:0001869;9.91e-09;32!UBERON:0001871;1.44e-08;6!UBERON:0009663;2.75e-08;7!UBERON:0001017;4.31e-08;75!UBERON:0000955;2.18e-07;68!UBERON:0001016;2.22e-07;83!UBERON:0002619;7.52e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.71e-27,56;UBERON:0005068,5.71e-27,56;UBERON:0006241,5.71e-27,56;UBERON:0007135,5.71e-27,56;UBERON:0000073,4.80e-22,53;UBERON:0002616,4.80e-22,53;UBERON:0003075,2.49e-20,82;UBERON:0007284,2.49e-20,82;UBERON:0002346,5.50e-19,86;UBERON:0001017,5.92e-19,81;UBERON:0007023,2.52e-18,114;UBERON:0001016,9.78e-18,89;UBERON:0000955,5.84e-17,68;UBERON:0006238,5.84e-17,68;UBERON:0010314,3.80e-16,132;UBERON:0002298,4.63e-16,6;UBERON:0003076,6.46e-16,15;UBERON:0003057,6.46e-16,15;UBERON:0010371,2.19e-15,104;UBERON:0002780,3.51e-14,41;UBERON:0001890,3.51e-14,41;UBERON:0003080,3.51e-14,41;UBERON:0006240,3.51e-14,41;UBERON:0003528,4.79e-14,34;UBERON:0002020,4.79e-14,34;UBERON:0000125,6.05e-13,9;UBERON:0002308,6.05e-13,9;UBERON:0002420,7.67e-13,9;UBERON:0007245,7.67e-13,9;UBERON:0010009,7.67e-13,9;UBERON:0010011,7.67e-13,9;UBERON:0000454,7.67e-13,9;UBERON:0000349,1.17e-12,5;UBERON:0001893,5.19e-12,34;UBERON:0004732,6.89e-12,13;UBERON:0000025,1.06e-11,192;UBERON:0003056,1.15e-11,61;UBERON:0002791,4.20e-11,32;UBERON:0004733,6.62e-10,12;UBERON:0002028,6.62e-10,12;UBERON:0007277,6.62e-10,12;UBERON:0001869,2.08e-09,32;UBERON:0004111,4.63e-09,240;UBERON:0002240,6.46e-09,3;UBERON:0005174,6.46e-09,3;UBERON:0001137,6.46e-09,3;UBERON:0000988,6.80e-09,3;UBERON:0001896,7.34e-09,3;UBERON:0005290,7.34e-09,3;UBERON:0010096,7.34e-09,3;UBERON:0009663,1.42e-08,7;UBERON:0001871,2.20e-08,6;UBERON:0004121,5.74e-08,171;UBERON:0000924,5.74e-08,171;UBERON:0006601,5.74e-08,171;UBERON:0000483,1.09e-07,306;UBERON:0000119,1.69e-07,309;UBERON:0011216,2.51e-07,223;UBERON:0002619,6.13e-07,22 | |||
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| |||
|short_description=p2@SAMD4A | |||
}} |
Latest revision as of 07:59, 20 September 2015
Short description: | p2@SAMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SAMD4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 344bp_to_ENST00000555112_5end |
EntrezGene: | SAMD4A |
HGNC: | 23023 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data