FFCP PHASE1:Mm9::chr10:52410380..52410392,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=215085|HGNC=|MCL_coexpression_id=593|UniProt=Q8BGK5|association_with_transcript=41bp_to_ENSMUST00000105473_5end|description=CAGE_peak_2_at_Slc35f1_5end|id=chr10:52410380..52410392,+|ontology_enrichment_celltype=CL:0000221!8.98e-22!44;CL:0000133!8.98e-22!44;CL:0002319!3.02e-21!43;CL:0000540!9.24e-20!33;CL:0000047!9.24e-20!33;CL:0000031!9.24e-20!33;CL:0000404!9.24e-20!33;CL:0000055!5.62e-16!50;CL:0000393!9.26e-15!39;CL:0000211!9.26e-15!39;CL:0000117!2.67e-13!23;CL:0000337!2.67e-13!23;CL:0000107!6.44e-08!9|ontology_enrichment_celltype_v019_2=CL:0000540,3.77e-33,33;CL:0000047,3.77e-33,33;CL:0000031,3.77e-33,33;CL:0000404,3.77e-33,33;CL:0000221,2.00e-32,44;CL:0000133,2.00e-32,44;CL:0002319,1.67e-31,43;CL:0000393,2.18e-26,39;CL:0000211,2.18e-26,39;CL:0000117,1.66e-22,23;CL:0000337,1.66e-22,23;CL:0002321,6.28e-16,70;CL:0000107,6.68e-13,9;CL:0002609,1.22e-08,6;CL:0000723,4.88e-07,91;CL:0000048,4.88e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.95e-34!73;UBERON:0005743!4.95e-34!73;UBERON:0000073!5.28e-34!75;UBERON:0001016!5.28e-34!75;UBERON:0004121!4.31e-33!102;UBERON:0000924!4.31e-33!102;UBERON:0006601!4.31e-33!102;UBERON:0002346!6.79e-25!71;UBERON:0003075!6.79e-25!71;UBERON:0007284!6.79e-25!71;UBERON:0000033!1.25e-23!63;UBERON:0003056!4.42e-22!49;UBERON:0001049!1.53e-21!52;UBERON:0005068!1.53e-21!52;UBERON:0006241!1.53e-21!52;UBERON:0007135!1.53e-21!52;UBERON:0002020!9.20e-21!34;UBERON:0000955!6.98e-20!50;UBERON:0006238!6.98e-20!50;UBERON:0002616!1.08e-19!49;UBERON:0002791!2.44e-18!29;UBERON:0003528!2.44e-18!29;UBERON:0001893!2.44e-18!29;UBERON:0003080!4.03e-18!40;UBERON:0002780!1.15e-17!39;UBERON:0001890!1.15e-17!39;UBERON:0006240!1.15e-17!39;UBERON:0000956!3.45e-14!21;UBERON:0001869!3.45e-14!21;UBERON:0000203!3.45e-14!21;UBERON:0000153!1.02e-13!94;UBERON:0007811!9.71e-13!86;UBERON:0002619!2.40e-11!17;UBERON:0002410!6.44e-08!9;UBERON:0000468!1.55e-07!333;UBERON:0000010!1.96e-07!11;UBERON:0002021!2.47e-07!10;UBERON:0000411!2.47e-07!10;UBERON:0001950!2.47e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.82e-48,73;UBERON:0001016,2.70e-46,75;UBERON:0004121,3.26e-44,95;UBERON:0000924,3.26e-44,95;UBERON:0006601,3.26e-44,95;UBERON:0002346,1.07e-37,64;UBERON:0003075,1.07e-37,64;UBERON:0007284,1.07e-37,64;UBERON:0002020,7.11e-36,34;UBERON:0010371,1.05e-32,73;UBERON:0000073,1.50e-31,54;UBERON:0003528,1.58e-31,29;UBERON:0002791,1.58e-31,29;UBERON:0001893,1.58e-31,29;UBERON:0001049,3.05e-30,52;UBERON:0005068,3.05e-30,52;UBERON:0006241,3.05e-30,52;UBERON:0007135,3.05e-30,52;UBERON:0003056,4.71e-30,49;UBERON:0003080,6.47e-27,40;UBERON:0002780,4.10e-26,39;UBERON:0001890,4.10e-26,39;UBERON:0006240,4.10e-26,39;UBERON:0002616,6.59e-25,46;UBERON:0000955,3.89e-24,47;UBERON:0006238,3.89e-24,47;UBERON:0000956,4.29e-24,21;UBERON:0001869,4.29e-24,21;UBERON:0000203,4.29e-24,21;UBERON:0010314,9.42e-23,92;UBERON:0002619,5.19e-19,17;UBERON:0002410,6.68e-13,9;UBERON:0002021,7.31e-12,10;UBERON:0000411,7.31e-12,10;UBERON:0001950,7.31e-12,10;UBERON:0000010,4.61e-10,11;UBERON:0001954,1.51e-08,7;UBERON:0003022,1.51e-08,7;UBERON:0002421,1.51e-08,7;UBERON:0000349,1.51e-08,7;UBERON:0002600,1.51e-08,7;UBERON:0002420,1.95e-08,8;UBERON:0007245,1.95e-08,8;UBERON:0010009,1.95e-08,8;UBERON:0010011,1.95e-08,8;UBERON:0000454,1.95e-08,8;UBERON:0011216,3.46e-08,194;UBERON:0000025,2.59e-07,114|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.5378032791413,2.3331587888914,0.839918529752175,1.43752564364972,0,0,0,0,0,0.515672092277442,2.42779753031517,3.70293685490423,1.90149421051854,0,0,0,0,0,1.49800055259202,1.92109152660777,4.04389488003063,5.40023753326763,5.04779907243317,2.28520787523043,1.98781686856452,3.79721477566358,2.77951865952885,5.51531271966013,1.10115880999389,1.40456071893706,1.68967186581868,3.29715719325485,3.20206752608434,2.08365348222704,1.67509799400829,2.8138130501584,1.22238598221448,2.65165726926301,1.28134512719193,2.23679334990361,0.151452386666368,0.755715601067855,0,0,0,0,0,0,0,0,0,0,2.11265129665021,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.60289056221049,0.117588707135705,0,0,0.289198713839823,0,0.647067399789637,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.64769703345305,2.74500361691176,1.7591609295801,4.86708096538374,4.34716277461562,2.49345653471472,3.56930778749067,0,0.124406970610093,0,0.631325567659422,0.910843100738926,1.14951052216736,2.70093194708024,1.50704817835715,3.74200745332303,2.94661556655154,2.90475346135159,0.517406741478031,0.431135985865684,0.189106080167819,0.879755620819744,0.657587197282725,0.556094498451196,1.39300866608867,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0.36012412292203,0,0.196764231747404,0,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0.268412837520744,2.73376933133365,4.32199371992995,0,0,0.213288250535234,0.696710015581316,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.799739588268102,1.1270773567308,0.203651327845314,0,0.49095073923223,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,1.44495530989013,1.17211686592203,0,0,3.15508219416257,6.24701990874622,9.47862950024315,5.9742199488138,4.90157082981267,4.52922449262132,6.8817819284732,4.09158201075837,6.32460444714438,0.642642632843614,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.535106452806212,0.493647061806363,0,0,0,0.441056796109924,0,0.484393280087717,0.482503399425247,0.119372344003136,0.492422699235184,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.432021363287205,0,0.436725127492355,0.134864346384821,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0,0,5.0827665835536,2.76195141904306,5.15605962095457,2.57779773515531,2.05524755931193,4.5323633843382,2.70009000092722,2.70192721934532,2.71885445390523,4.65984280576638,0.518936737920883,2.79317411380722,1.02440163452481,0.729320151204882,0.838452650511929,0.735374033800057,0.666740183404846,1.03017528619447,0.962757628775446,0.505394423527595,1.01391719956096,0.565879024158229,0.842773567228942,1.02440243847791,0.402048282689293,0.952587382566147,0.811190281613988,0.578727661391115,0.412085900803307,0.883193520806384,1.02860775715625,0.354951612318675,0.715308569841963,0.726732083161643,0.376437521661322,0.592302255241736,0.73171189149109,0.263069711437843,0.950628796921032,0.561142271657738,0.593175090620871,1.0835493061312,0.818462086339379,0.464810523557898,0.771626443924566,2.49810577937946,0.701794825336225,1.50409737833809,1.14772999241306,0.220591419119515,1.39120701372253|short_description=p2@Slc35f1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215085 | |||
|HGNC= | |||
|MCL_coexpression_id=593 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGK5 | |||
|association_with_transcript=41bp_to_ENSMUST00000105473_5end | |||
|cluster_id=chr10:52410380..52410392,+ | |||
|description=CAGE_peak_2_at_Slc35f1_5end | |||
|id=chr10:52410380..52410392,+ | |||
|ontology_enrichment_celltype=CL:0000221!8.98e-22!44;CL:0000133!8.98e-22!44;CL:0002319!3.02e-21!43;CL:0000540!9.24e-20!33;CL:0000047!9.24e-20!33;CL:0000031!9.24e-20!33;CL:0000404!9.24e-20!33;CL:0000055!5.62e-16!50;CL:0000393!9.26e-15!39;CL:0000211!9.26e-15!39;CL:0000117!2.67e-13!23;CL:0000337!2.67e-13!23;CL:0000107!6.44e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.77e-33,33;CL:0000047,3.77e-33,33;CL:0000031,3.77e-33,33;CL:0000404,3.77e-33,33;CL:0000221,2.00e-32,44;CL:0000133,2.00e-32,44;CL:0002319,1.67e-31,43;CL:0000393,2.18e-26,39;CL:0000211,2.18e-26,39;CL:0000117,1.66e-22,23;CL:0000337,1.66e-22,23;CL:0002321,6.28e-16,70;CL:0000107,6.68e-13,9;CL:0002609,1.22e-08,6;CL:0000723,4.88e-07,91;CL:0000048,4.88e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.95e-34!73;UBERON:0005743!4.95e-34!73;UBERON:0000073!5.28e-34!75;UBERON:0001016!5.28e-34!75;UBERON:0004121!4.31e-33!102;UBERON:0000924!4.31e-33!102;UBERON:0006601!4.31e-33!102;UBERON:0002346!6.79e-25!71;UBERON:0003075!6.79e-25!71;UBERON:0007284!6.79e-25!71;UBERON:0000033!1.25e-23!63;UBERON:0003056!4.42e-22!49;UBERON:0001049!1.53e-21!52;UBERON:0005068!1.53e-21!52;UBERON:0006241!1.53e-21!52;UBERON:0007135!1.53e-21!52;UBERON:0002020!9.20e-21!34;UBERON:0000955!6.98e-20!50;UBERON:0006238!6.98e-20!50;UBERON:0002616!1.08e-19!49;UBERON:0002791!2.44e-18!29;UBERON:0003528!2.44e-18!29;UBERON:0001893!2.44e-18!29;UBERON:0003080!4.03e-18!40;UBERON:0002780!1.15e-17!39;UBERON:0001890!1.15e-17!39;UBERON:0006240!1.15e-17!39;UBERON:0000956!3.45e-14!21;UBERON:0001869!3.45e-14!21;UBERON:0000203!3.45e-14!21;UBERON:0000153!1.02e-13!94;UBERON:0007811!9.71e-13!86;UBERON:0002619!2.40e-11!17;UBERON:0002410!6.44e-08!9;UBERON:0000468!1.55e-07!333;UBERON:0000010!1.96e-07!11;UBERON:0002021!2.47e-07!10;UBERON:0000411!2.47e-07!10;UBERON:0001950!2.47e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.82e-48,73;UBERON:0001016,2.70e-46,75;UBERON:0004121,3.26e-44,95;UBERON:0000924,3.26e-44,95;UBERON:0006601,3.26e-44,95;UBERON:0002346,1.07e-37,64;UBERON:0003075,1.07e-37,64;UBERON:0007284,1.07e-37,64;UBERON:0002020,7.11e-36,34;UBERON:0010371,1.05e-32,73;UBERON:0000073,1.50e-31,54;UBERON:0003528,1.58e-31,29;UBERON:0002791,1.58e-31,29;UBERON:0001893,1.58e-31,29;UBERON:0001049,3.05e-30,52;UBERON:0005068,3.05e-30,52;UBERON:0006241,3.05e-30,52;UBERON:0007135,3.05e-30,52;UBERON:0003056,4.71e-30,49;UBERON:0003080,6.47e-27,40;UBERON:0002780,4.10e-26,39;UBERON:0001890,4.10e-26,39;UBERON:0006240,4.10e-26,39;UBERON:0002616,6.59e-25,46;UBERON:0000955,3.89e-24,47;UBERON:0006238,3.89e-24,47;UBERON:0000956,4.29e-24,21;UBERON:0001869,4.29e-24,21;UBERON:0000203,4.29e-24,21;UBERON:0010314,9.42e-23,92;UBERON:0002619,5.19e-19,17;UBERON:0002410,6.68e-13,9;UBERON:0002021,7.31e-12,10;UBERON:0000411,7.31e-12,10;UBERON:0001950,7.31e-12,10;UBERON:0000010,4.61e-10,11;UBERON:0001954,1.51e-08,7;UBERON:0003022,1.51e-08,7;UBERON:0002421,1.51e-08,7;UBERON:0000349,1.51e-08,7;UBERON:0002600,1.51e-08,7;UBERON:0002420,1.95e-08,8;UBERON:0007245,1.95e-08,8;UBERON:0010009,1.95e-08,8;UBERON:0010011,1.95e-08,8;UBERON:0000454,1.95e-08,8;UBERON:0011216,3.46e-08,194;UBERON:0000025,2.59e-07,114 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,1.5378032791413,2.3331587888914,0.839918529752175,1.43752564364972,0,0,0,0,0,0.515672092277442,2.42779753031517,3.70293685490423,1.90149421051854,0,0,0,0,0,1.49800055259202,1.92109152660777,4.04389488003063,5.40023753326763,5.04779907243317,2.28520787523043,1.98781686856452,3.79721477566358,2.77951865952885,5.51531271966013,1.10115880999389,1.40456071893706,1.68967186581868,3.29715719325485,3.20206752608434,2.08365348222704,1.67509799400829,2.8138130501584,1.22238598221448,2.65165726926301,1.28134512719193,2.23679334990361,0.151452386666368,0.755715601067855,0,0,0,0,0,0,0,0,0,0,2.11265129665021,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0.60289056221049,0.117588707135705,0,0,0.289198713839823,0,0.647067399789637,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.64769703345305,2.74500361691176,1.7591609295801,4.86708096538374,4.34716277461562,2.49345653471472,3.56930778749067,0,0.124406970610093,0,0.631325567659422,0.910843100738926,1.14951052216736,2.70093194708024,1.50704817835715,3.74200745332303,2.94661556655154,2.90475346135159,0.517406741478031,0.431135985865684,0.189106080167819,0.879755620819744,0.657587197282725,0.556094498451196,1.39300866608867,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0.36012412292203,0,0.196764231747404,0,0.465067889500816,0.536546802799238,0.233530684734339,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0.268412837520744,2.73376933133365,4.32199371992995,0,0,0.213288250535234,0.696710015581316,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.799739588268102,1.1270773567308,0.203651327845314,0,0.49095073923223,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,1.44495530989013,1.17211686592203,0,0,3.15508219416257,6.24701990874622,9.47862950024315,5.9742199488138,4.90157082981267,4.52922449262132,6.8817819284732,4.09158201075837,6.32460444714438,0.642642632843614,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.535106452806212,0.493647061806363,0,0,0,0.441056796109924,0,0.484393280087717,0.482503399425247,0.119372344003136,0.492422699235184,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.432021363287205,0,0.436725127492355,0.134864346384821,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0.39736270956253,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0,0,5.0827665835536,2.76195141904306,5.15605962095457,2.57779773515531,2.05524755931193,4.5323633843382,2.70009000092722,2.70192721934532,2.71885445390523,4.65984280576638,0.518936737920883,2.79317411380722,1.02440163452481,0.729320151204882,0.838452650511929,0.735374033800057,0.666740183404846,1.03017528619447,0.962757628775446,0.505394423527595,1.01391719956096,0.565879024158229,0.842773567228942,1.02440243847791,0.402048282689293,0.952587382566147,0.811190281613988,0.578727661391115,0.412085900803307,0.883193520806384,1.02860775715625,0.354951612318675,0.715308569841963,0.726732083161643,0.376437521661322,0.592302255241736,0.73171189149109,0.263069711437843,0.950628796921032,0.561142271657738,0.593175090620871,1.0835493061312,0.818462086339379,0.464810523557898,0.771626443924566,2.49810577937946,0.701794825336225,1.50409737833809,1.14772999241306,0.220591419119515,1.39120701372253 | |||
|short_description=p2@Slc35f1 | |||
}} |
Latest revision as of 02:01, 26 September 2015
Short description: | p2@Slc35f1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc35f1_5end |
Coexpression cluster: | MCL_coexpression_mm9:593 |
Association with transcript: | 41bp_to_ENSMUST00000105473_5end |
EntrezGene: | Slc35f1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.77e-33 | 33 |
neuronal stem cell | 3.77e-33 | 33 |
neuroblast | 3.77e-33 | 33 |
electrically signaling cell | 3.77e-33 | 33 |
ectodermal cell | 2.00e-32 | 44 |
neurectodermal cell | 2.00e-32 | 44 |
neural cell | 1.67e-31 | 43 |
electrically responsive cell | 2.18e-26 | 39 |
electrically active cell | 2.18e-26 | 39 |
CNS neuron (sensu Vertebrata) | 1.66e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.66e-22 | 23 |
embryonic cell | 6.28e-16 | 70 |
autonomic neuron | 6.68e-13 | 9 |
neuron of cerebral cortex | 1.22e-08 | 6 |
somatic stem cell | 4.88e-07 | 91 |
multi fate stem cell | 4.88e-07 | 91 |