FFCP PHASE1:Mm9::chr14:70205251..70205265,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=246710|HGNC=|MCL_coexpression_id=1|UniProt=Q91V93|association_with_transcript=71bp_to_ENSMUST00000022665_5end|description=CAGE_peak_5_at_Rhobtb2_5end|id=chr14:70205251..70205265,-|ontology_enrichment_celltype=CL:0000117!1.54e-13!23;CL:0000337!1.54e-13!23;CL:0000221!3.08e-11!44;CL:0000133!3.08e-11!44;CL:0002319!3.83e-11!43;CL:0000540!1.18e-10!33;CL:0000047!1.18e-10!33;CL:0000031!1.18e-10!33;CL:0000404!1.18e-10!33;CL:0000055!4.78e-08!50;CL:0000393!9.00e-08!39;CL:0000211!9.00e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-23,23;CL:0000337,2.53e-23,23;CL:0002319,2.42e-16,43;CL:0000221,9.24e-16,44;CL:0000133,9.24e-16,44;CL:0000540,5.89e-14,33;CL:0000047,5.89e-14,33;CL:0000031,5.89e-14,33;CL:0000404,5.89e-14,33;CL:0000393,1.03e-10,39;CL:0000211,1.03e-10,39;CL:0002609,3.53e-07,6;CL:0002321,9.00e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.10e-30!73;UBERON:0005743!1.10e-30!73;UBERON:0000073!1.38e-29!75;UBERON:0001016!1.38e-29!75;UBERON:0000033!2.23e-28!63;UBERON:0001049!3.70e-28!52;UBERON:0005068!3.70e-28!52;UBERON:0006241!3.70e-28!52;UBERON:0007135!3.70e-28!52;UBERON:0000955!1.12e-27!50;UBERON:0006238!1.12e-27!50;UBERON:0002616!6.05e-27!49;UBERON:0002346!8.23e-26!71;UBERON:0003075!8.23e-26!71;UBERON:0007284!8.23e-26!71;UBERON:0003056!1.34e-24!49;UBERON:0004121!2.07e-24!102;UBERON:0000924!2.07e-24!102;UBERON:0006601!2.07e-24!102;UBERON:0003080!1.92e-23!40;UBERON:0002780!7.76e-23!39;UBERON:0001890!7.76e-23!39;UBERON:0006240!7.76e-23!39;UBERON:0002020!2.48e-21!34;UBERON:0007811!1.93e-20!86;UBERON:0000153!3.76e-20!94;UBERON:0002791!7.31e-19!29;UBERON:0003528!7.31e-19!29;UBERON:0001893!7.31e-19!29;UBERON:0000956!2.51e-14!21;UBERON:0001869!2.51e-14!21;UBERON:0000203!2.51e-14!21;UBERON:0002619!4.43e-12!17;UBERON:0002021!2.14e-08!10;UBERON:0000411!2.14e-08!10;UBERON:0001950!2.14e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.01e-52,54;UBERON:0001017,2.32e-49,73;UBERON:0001049,2.73e-49,52;UBERON:0005068,2.73e-49,52;UBERON:0006241,2.73e-49,52;UBERON:0007135,2.73e-49,52;UBERON:0001016,1.51e-47,75;UBERON:0000955,6.67e-45,47;UBERON:0006238,6.67e-45,47;UBERON:0002616,1.37e-43,46;UBERON:0002346,6.52e-42,64;UBERON:0003075,6.52e-42,64;UBERON:0007284,6.52e-42,64;UBERON:0003080,1.10e-39,40;UBERON:0002780,1.40e-38,39;UBERON:0001890,1.40e-38,39;UBERON:0006240,1.40e-38,39;UBERON:0004121,1.12e-37,95;UBERON:0000924,1.12e-37,95;UBERON:0006601,1.12e-37,95;UBERON:0002020,1.51e-37,34;UBERON:0003056,6.66e-35,49;UBERON:0010371,1.14e-34,73;UBERON:0003528,4.90e-33,29;UBERON:0002791,4.90e-33,29;UBERON:0001893,4.90e-33,29;UBERON:0000956,9.25e-25,21;UBERON:0001869,9.25e-25,21;UBERON:0000203,9.25e-25,21;UBERON:0010314,4.31e-24,92;UBERON:0002619,1.14e-20,17;UBERON:0000025,1.16e-14,114;UBERON:0002021,5.64e-14,10;UBERON:0000411,5.64e-14,10;UBERON:0001950,5.64e-14,10;UBERON:0004111,1.01e-12,122;UBERON:0003076,1.97e-09,12;UBERON:0003057,1.97e-09,12;UBERON:0002420,3.35e-09,8;UBERON:0007245,3.35e-09,8;UBERON:0010009,3.35e-09,8;UBERON:0010011,3.35e-09,8;UBERON:0000454,3.35e-09,8;UBERON:0001954,3.72e-08,7;UBERON:0003022,3.72e-08,7;UBERON:0002421,3.72e-08,7;UBERON:0000349,3.72e-08,7;UBERON:0002600,3.72e-08,7;UBERON:0011216,4.84e-08,194;UBERON:0000369,5.14e-07,5;UBERON:0002435,5.14e-07,5;UBERON:0000204,5.14e-07,5;UBERON:0010082,5.14e-07,5;UBERON:0001894,9.10e-07,10;UBERON:0006222,9.10e-07,10|phase1_expression=0.80074423552397,0,0,0.60492842261366,0,0.16787927191189,0,0.774739940649458,0.281577444303333,0,0,0,0.171200729931206,0.437102012094987,0,0.202475267389826,0.699561878128147,1.41957974411207,1.37114433605739,0.42438965179803,2.21112554392781,1.68794617041505,0.261199789138935,0.319984845586813,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,5.01457859675027,6.15121311656521,4.6663175777828,2.2397827460058,0,1.51004345451963,2.17608642603403,0.672187598284928,0.514518872071894,0.286533439938757,0,8.6996078169627,6.34789175126439,11.4089652631112,1.0165335962074,0,0,0,0,3.29560121570245,2.68952813725088,4.87341177849845,3.64516033495565,3.78584930432488,2.57085885963423,3.3130281142742,5.51208596467293,5.94241920313065,7.35375029288017,4.40463523997555,6.51205424234457,5.83704826373725,8.5726087024626,8.59983849862651,8.85552729946492,3.07101298901519,1.68828783009504,3.36156145108982,2.35702868378934,4.12877874317399,3.72798891650601,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.29688427812965,0.520455980298408,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0,0.289198713839823,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,6.14839673724249,10.4723353406728,0,0.11981512450592,0,0,5.39246301857362,13.7250180845588,5.27748278874031,16.1656617778817,12.2743419518559,7.89594569326328,6.32740925964255,0.203678727700633,0,0,1.68353484709179,1.04096354370163,0.689706313300419,0.360124259610698,0.90422890701429,0.748401490664606,0.384341160854549,0.562210347358373,1.81092359517311,1.5089759505299,0.945530400839096,0.527853372491847,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.405344047729279,0,0,0.268412837520744,4.83666881697493,3.08713837137853,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.456994050438915,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,1.28932855251423,0,2.52470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,9.96096080907602,0,0.534196811001766,0.81443479676788,1.15479086080775,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,1.02131881726136,0.900305470156551,1.55230420539305,1.92903331528433,1.24138163549592,1.42695054081656,2.13913726782757,1.8267896946876,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0,1.48340241608408,0.170870880797853,0,0.370389054739423,0.376736914009382,0,0.228778173206523,0.339956859987711,0.839708713941948,0.967399816630967,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0,0.583353565032143,0.258319646955462,0,0.117357238645754,0.13020438484395,0.104859344425711,0.724752362478018,0.288030006257865,1.26404448251271,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0.480781798079875,0.295379054349154,0.302899349844443,0.457240839929999,0.100826185136841,0.779663045918019,0.769694733122636,0.701261413089414,0.680191150845634,0,0.0897138566094757,0,0.386379188064381,0,0,0.643105137237198,0,12.9892923801925,11.5081309126794,15.4681788628637,16.1541991403066,15.7568979547248,15.8632718451837,10.1253375034771,14.4102785031751,17.2194115413998,10.8729665467882,1.24544817101012,1.59609949360412,1.36586884603307,0.972426868273176,1.25767897576789,0.551530525350042,0.666740183404846,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.943131706930381,0.280924522409647,0.768301828858431,0.574354689556133,1.42888107384922,0.695305955669133,0.578727661391115,0,0.588795680537589,0.685738504770831,0.532427418478012,0.238436189947321,0.726732083161643,0.846984423737976,0.592302255241736,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.830445126869219,0.886540341380071,1.22769312950907,1.08455788830176,0.964533054905707,1.74867404556562,0.467863216890817,0.429742108096597,0.191288332068843,0.661774257358546,0.695603506861264|short_description=p5@Rhobtb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=246710 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q91V93 | |||
|association_with_transcript=71bp_to_ENSMUST00000022665_5end | |||
|cluster_id=chr14:70205251..70205265,- | |||
|description=CAGE_peak_5_at_Rhobtb2_5end | |||
|id=chr14:70205251..70205265,- | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-13!23;CL:0000337!1.54e-13!23;CL:0000221!3.08e-11!44;CL:0000133!3.08e-11!44;CL:0002319!3.83e-11!43;CL:0000540!1.18e-10!33;CL:0000047!1.18e-10!33;CL:0000031!1.18e-10!33;CL:0000404!1.18e-10!33;CL:0000055!4.78e-08!50;CL:0000393!9.00e-08!39;CL:0000211!9.00e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.53e-23,23;CL:0000337,2.53e-23,23;CL:0002319,2.42e-16,43;CL:0000221,9.24e-16,44;CL:0000133,9.24e-16,44;CL:0000540,5.89e-14,33;CL:0000047,5.89e-14,33;CL:0000031,5.89e-14,33;CL:0000404,5.89e-14,33;CL:0000393,1.03e-10,39;CL:0000211,1.03e-10,39;CL:0002609,3.53e-07,6;CL:0002321,9.00e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-30!73;UBERON:0005743!1.10e-30!73;UBERON:0000073!1.38e-29!75;UBERON:0001016!1.38e-29!75;UBERON:0000033!2.23e-28!63;UBERON:0001049!3.70e-28!52;UBERON:0005068!3.70e-28!52;UBERON:0006241!3.70e-28!52;UBERON:0007135!3.70e-28!52;UBERON:0000955!1.12e-27!50;UBERON:0006238!1.12e-27!50;UBERON:0002616!6.05e-27!49;UBERON:0002346!8.23e-26!71;UBERON:0003075!8.23e-26!71;UBERON:0007284!8.23e-26!71;UBERON:0003056!1.34e-24!49;UBERON:0004121!2.07e-24!102;UBERON:0000924!2.07e-24!102;UBERON:0006601!2.07e-24!102;UBERON:0003080!1.92e-23!40;UBERON:0002780!7.76e-23!39;UBERON:0001890!7.76e-23!39;UBERON:0006240!7.76e-23!39;UBERON:0002020!2.48e-21!34;UBERON:0007811!1.93e-20!86;UBERON:0000153!3.76e-20!94;UBERON:0002791!7.31e-19!29;UBERON:0003528!7.31e-19!29;UBERON:0001893!7.31e-19!29;UBERON:0000956!2.51e-14!21;UBERON:0001869!2.51e-14!21;UBERON:0000203!2.51e-14!21;UBERON:0002619!4.43e-12!17;UBERON:0002021!2.14e-08!10;UBERON:0000411!2.14e-08!10;UBERON:0001950!2.14e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.01e-52,54;UBERON:0001017,2.32e-49,73;UBERON:0001049,2.73e-49,52;UBERON:0005068,2.73e-49,52;UBERON:0006241,2.73e-49,52;UBERON:0007135,2.73e-49,52;UBERON:0001016,1.51e-47,75;UBERON:0000955,6.67e-45,47;UBERON:0006238,6.67e-45,47;UBERON:0002616,1.37e-43,46;UBERON:0002346,6.52e-42,64;UBERON:0003075,6.52e-42,64;UBERON:0007284,6.52e-42,64;UBERON:0003080,1.10e-39,40;UBERON:0002780,1.40e-38,39;UBERON:0001890,1.40e-38,39;UBERON:0006240,1.40e-38,39;UBERON:0004121,1.12e-37,95;UBERON:0000924,1.12e-37,95;UBERON:0006601,1.12e-37,95;UBERON:0002020,1.51e-37,34;UBERON:0003056,6.66e-35,49;UBERON:0010371,1.14e-34,73;UBERON:0003528,4.90e-33,29;UBERON:0002791,4.90e-33,29;UBERON:0001893,4.90e-33,29;UBERON:0000956,9.25e-25,21;UBERON:0001869,9.25e-25,21;UBERON:0000203,9.25e-25,21;UBERON:0010314,4.31e-24,92;UBERON:0002619,1.14e-20,17;UBERON:0000025,1.16e-14,114;UBERON:0002021,5.64e-14,10;UBERON:0000411,5.64e-14,10;UBERON:0001950,5.64e-14,10;UBERON:0004111,1.01e-12,122;UBERON:0003076,1.97e-09,12;UBERON:0003057,1.97e-09,12;UBERON:0002420,3.35e-09,8;UBERON:0007245,3.35e-09,8;UBERON:0010009,3.35e-09,8;UBERON:0010011,3.35e-09,8;UBERON:0000454,3.35e-09,8;UBERON:0001954,3.72e-08,7;UBERON:0003022,3.72e-08,7;UBERON:0002421,3.72e-08,7;UBERON:0000349,3.72e-08,7;UBERON:0002600,3.72e-08,7;UBERON:0011216,4.84e-08,194;UBERON:0000369,5.14e-07,5;UBERON:0002435,5.14e-07,5;UBERON:0000204,5.14e-07,5;UBERON:0010082,5.14e-07,5;UBERON:0001894,9.10e-07,10;UBERON:0006222,9.10e-07,10 | |||
|phase1_expression=0.80074423552397,0,0,0.60492842261366,0,0.16787927191189,0,0.774739940649458,0.281577444303333,0,0,0,0.171200729931206,0.437102012094987,0,0.202475267389826,0.699561878128147,1.41957974411207,1.37114433605739,0.42438965179803,2.21112554392781,1.68794617041505,0.261199789138935,0.319984845586813,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,5.01457859675027,6.15121311656521,4.6663175777828,2.2397827460058,0,1.51004345451963,2.17608642603403,0.672187598284928,0.514518872071894,0.286533439938757,0,8.6996078169627,6.34789175126439,11.4089652631112,1.0165335962074,0,0,0,0,3.29560121570245,2.68952813725088,4.87341177849845,3.64516033495565,3.78584930432488,2.57085885963423,3.3130281142742,5.51208596467293,5.94241920313065,7.35375029288017,4.40463523997555,6.51205424234457,5.83704826373725,8.5726087024626,8.59983849862651,8.85552729946492,3.07101298901519,1.68828783009504,3.36156145108982,2.35702868378934,4.12877874317399,3.72798891650601,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0.35333957451034,0.563373679106722,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0.29688427812965,0.520455980298408,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0,0.289198713839823,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,6.14839673724249,10.4723353406728,0,0.11981512450592,0,0,5.39246301857362,13.7250180845588,5.27748278874031,16.1656617778817,12.2743419518559,7.89594569326328,6.32740925964255,0.203678727700633,0,0,1.68353484709179,1.04096354370163,0.689706313300419,0.360124259610698,0.90422890701429,0.748401490664606,0.384341160854549,0.562210347358373,1.81092359517311,1.5089759505299,0.945530400839096,0.527853372491847,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.405344047729279,0,0,0.268412837520744,4.83666881697493,3.08713837137853,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.379335801906163,0.456994050438915,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,0,0,3.53211297973142,1.28932855251423,0,2.52470927204373,0.315508219416257,0.390438744296638,0,0.477937595905104,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,9.96096080907602,0,0.534196811001766,0.81443479676788,1.15479086080775,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0,0,0,1.02131881726136,0.900305470156551,1.55230420539305,1.92903331528433,1.24138163549592,1.42695054081656,2.13913726782757,1.8267896946876,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.238744688006273,0,0,1.48340241608408,0.170870880797853,0,0.370389054739423,0.376736914009382,0,0.228778173206523,0.339956859987711,0.839708713941948,0.967399816630967,0,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0,0.583353565032143,0.258319646955462,0,0.117357238645754,0.13020438484395,0.104859344425711,0.724752362478018,0.288030006257865,1.26404448251271,0.405450430580328,0,0.129920822977795,0.179026695667481,0,0.480781798079875,0.295379054349154,0.302899349844443,0.457240839929999,0.100826185136841,0.779663045918019,0.769694733122636,0.701261413089414,0.680191150845634,0,0.0897138566094757,0,0.386379188064381,0,0,0.643105137237198,0,12.9892923801925,11.5081309126794,15.4681788628637,16.1541991403066,15.7568979547248,15.8632718451837,10.1253375034771,14.4102785031751,17.2194115413998,10.8729665467882,1.24544817101012,1.59609949360412,1.36586884603307,0.972426868273176,1.25767897576789,0.551530525350042,0.666740183404846,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.943131706930381,0.280924522409647,0.768301828858431,0.574354689556133,1.42888107384922,0.695305955669133,0.578727661391115,0,0.588795680537589,0.685738504770831,0.532427418478012,0.238436189947321,0.726732083161643,0.846984423737976,0.592302255241736,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.830445126869219,0.886540341380071,1.22769312950907,1.08455788830176,0.964533054905707,1.74867404556562,0.467863216890817,0.429742108096597,0.191288332068843,0.661774257358546,0.695603506861264 | |||
|short_description=p5@Rhobtb2 | |||
}} |
Latest revision as of 07:58, 26 September 2015
Short description: | p5@Rhobtb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rhobtb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 71bp_to_ENSMUST00000022665_5end |
EntrezGene: | Rhobtb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.53e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-23 | 23 |
neural cell | 2.42e-16 | 43 |
ectodermal cell | 9.24e-16 | 44 |
neurectodermal cell | 9.24e-16 | 44 |
neuron | 5.89e-14 | 33 |
neuronal stem cell | 5.89e-14 | 33 |
neuroblast | 5.89e-14 | 33 |
electrically signaling cell | 5.89e-14 | 33 |
electrically responsive cell | 1.03e-10 | 39 |
electrically active cell | 1.03e-10 | 39 |
neuron of cerebral cortex | 3.53e-07 | 6 |
embryonic cell | 9.00e-07 | 70 |