FFCP PHASE1:Mm9::chr6:119280741..119280818,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=211187 | |EntrezGene=211187 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BGX3 | |UniProt=Q8BGX3 | ||
|association_with_transcript=0bp_to_ENSMUST00000068351,NM_172492,uc009dmb.2,uc009dmc.2_5end | |association_with_transcript=0bp_to_ENSMUST00000068351,NM_172492,uc009dmb.2,uc009dmc.2_5end | ||
|cluster_id=chr6:119280741..119280818,- | |||
|description=CAGE_peak_1_at_Lrtm2_5end | |description=CAGE_peak_1_at_Lrtm2_5end | ||
|id=chr6:119280741..119280818,- | |id=chr6:119280741..119280818,- | ||
|ontology_enrichment_celltype=CL:0000117!4.09e-13!23;CL:0000337!4.09e-13!23;CL:0000221!1.18e-08!44;CL:0000133!1.18e-08!44;CL:0002319!3.28e-08!43;CL:0000540!1.21e-07!33;CL:0000047!1.21e-07!33;CL:0000031!1.21e-07!33;CL:0000404!1.21e-07!33 | |ontology_enrichment_celltype=CL:0000117!4.09e-13!23;CL:0000337!4.09e-13!23;CL:0000221!1.18e-08!44;CL:0000133!1.18e-08!44;CL:0002319!3.28e-08!43;CL:0000540!1.21e-07!33;CL:0000047!1.21e-07!33;CL:0000031!1.21e-07!33;CL:0000404!1.21e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-16,23;CL:0000337,1.96e-16,23;CL:0000221,1.42e-13,44;CL:0000133,1.42e-13,44;CL:0002319,7.41e-13,43;CL:0000540,8.66e-11,33;CL:0000047,8.66e-11,33;CL:0000031,8.66e-11,33;CL:0000404,8.66e-11,33;CL:0000393,3.55e-08,39;CL:0000211,3.55e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!3.03e-27!63;UBERON:0001017!1.18e-24!73;UBERON:0005743!1.18e-24!73;UBERON:0001049!1.36e-24!52;UBERON:0005068!1.36e-24!52;UBERON:0006241!1.36e-24!52;UBERON:0007135!1.36e-24!52;UBERON:0000955!4.87e-24!50;UBERON:0006238!4.87e-24!50;UBERON:0000073!3.28e-23!75;UBERON:0001016!3.28e-23!75;UBERON:0002616!3.47e-23!49;UBERON:0003056!5.76e-21!49;UBERON:0002020!5.92e-21!34;UBERON:0004121!1.63e-20!102;UBERON:0000924!1.63e-20!102;UBERON:0006601!1.63e-20!102;UBERON:0002346!1.98e-20!71;UBERON:0003075!1.98e-20!71;UBERON:0007284!1.98e-20!71;UBERON:0003080!3.01e-18!40;UBERON:0002791!7.28e-18!29;UBERON:0003528!7.28e-18!29;UBERON:0001893!7.28e-18!29;UBERON:0002780!1.67e-17!39;UBERON:0001890!1.67e-17!39;UBERON:0006240!1.67e-17!39;UBERON:0007811!1.03e-13!86;UBERON:0000956!8.29e-13!21;UBERON:0001869!8.29e-13!21;UBERON:0000203!8.29e-13!21;UBERON:0002619!4.29e-12!17;UBERON:0000153!5.14e-11!94;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0000025!3.93e-08!114;UBERON:0004111!4.38e-08!122;UBERON:0003076!6.17e-07!12;UBERON:0003057!6.17e-07!12 | |ontology_enrichment_uberon=UBERON:0000033!3.03e-27!63;UBERON:0001017!1.18e-24!73;UBERON:0005743!1.18e-24!73;UBERON:0001049!1.36e-24!52;UBERON:0005068!1.36e-24!52;UBERON:0006241!1.36e-24!52;UBERON:0007135!1.36e-24!52;UBERON:0000955!4.87e-24!50;UBERON:0006238!4.87e-24!50;UBERON:0000073!3.28e-23!75;UBERON:0001016!3.28e-23!75;UBERON:0002616!3.47e-23!49;UBERON:0003056!5.76e-21!49;UBERON:0002020!5.92e-21!34;UBERON:0004121!1.63e-20!102;UBERON:0000924!1.63e-20!102;UBERON:0006601!1.63e-20!102;UBERON:0002346!1.98e-20!71;UBERON:0003075!1.98e-20!71;UBERON:0007284!1.98e-20!71;UBERON:0003080!3.01e-18!40;UBERON:0002791!7.28e-18!29;UBERON:0003528!7.28e-18!29;UBERON:0001893!7.28e-18!29;UBERON:0002780!1.67e-17!39;UBERON:0001890!1.67e-17!39;UBERON:0006240!1.67e-17!39;UBERON:0007811!1.03e-13!86;UBERON:0000956!8.29e-13!21;UBERON:0001869!8.29e-13!21;UBERON:0000203!8.29e-13!21;UBERON:0002619!4.29e-12!17;UBERON:0000153!5.14e-11!94;UBERON:0002021!1.04e-08!10;UBERON:0000411!1.04e-08!10;UBERON:0001950!1.04e-08!10;UBERON:0000025!3.93e-08!114;UBERON:0004111!4.38e-08!122;UBERON:0003076!6.17e-07!12;UBERON:0003057!6.17e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.57e-36,73;UBERON:0000073,7.53e-36,54;UBERON:0001016,4.30e-35,75;UBERON:0004121,2.42e-34,95;UBERON:0000924,2.42e-34,95;UBERON:0006601,2.42e-34,95;UBERON:0001049,5.48e-33,52;UBERON:0005068,5.48e-33,52;UBERON:0006241,5.48e-33,52;UBERON:0007135,5.48e-33,52;UBERON:0002346,9.58e-33,64;UBERON:0003075,9.58e-33,64;UBERON:0007284,9.58e-33,64;UBERON:0010371,8.63e-30,73;UBERON:0002020,1.42e-28,34;UBERON:0000955,3.55e-28,47;UBERON:0006238,3.55e-28,47;UBERON:0002616,6.40e-27,46;UBERON:0003056,9.40e-25,49;UBERON:0003528,1.01e-23,29;UBERON:0002791,1.01e-23,29;UBERON:0001893,1.01e-23,29;UBERON:0003080,9.40e-23,40;UBERON:0002780,1.22e-21,39;UBERON:0001890,1.22e-21,39;UBERON:0006240,1.22e-21,39;UBERON:0010314,2.44e-20,92;UBERON:0002619,2.75e-18,17;UBERON:0000956,7.46e-16,21;UBERON:0001869,7.46e-16,21;UBERON:0000203,7.46e-16,21;UBERON:0002021,6.45e-13,10;UBERON:0000411,6.45e-13,10;UBERON:0001950,6.45e-13,10;UBERON:0000025,1.19e-11,114;UBERON:0004111,1.75e-11,122;UBERON:0003076,1.42e-10,12;UBERON:0003057,1.42e-10,12;UBERON:0002420,4.44e-09,8;UBERON:0007245,4.44e-09,8;UBERON:0010009,4.44e-09,8;UBERON:0010011,4.44e-09,8;UBERON:0000454,4.44e-09,8;UBERON:0011216,1.70e-07,194;UBERON:0002240,4.92e-07,6;UBERON:0005174,4.92e-07,6;UBERON:0001137,4.92e-07,6;UBERON:0001954,6.45e-07,7;UBERON:0003022,6.45e-07,7;UBERON:0002421,6.45e-07,7;UBERON:0000349,6.45e-07,7;UBERON:0002600,6.45e-07,7 | |||
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| ||
|short_description=p1@Lrtm2 | |short_description=p1@Lrtm2 | ||
}} | }} |
Latest revision as of 13:20, 26 September 2015
Short description: | p1@Lrtm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrtm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000068351, NM_172492, uc009dmb.2, uc009dmc.2_5end |
EntrezGene: | Lrtm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.96e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.96e-16 | 23 |
ectodermal cell | 1.42e-13 | 44 |
neurectodermal cell | 1.42e-13 | 44 |
neural cell | 7.41e-13 | 43 |
neuron | 8.66e-11 | 33 |
neuronal stem cell | 8.66e-11 | 33 |
neuroblast | 8.66e-11 | 33 |
electrically signaling cell | 8.66e-11 | 33 |
electrically responsive cell | 3.55e-08 | 39 |
electrically active cell | 3.55e-08 | 39 |