FFCP PHASE1:Mm9::chr7:51684308..51684349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=272381 | |EntrezGene=272381 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=747 | |MCL_coexpression_id=747 | ||
|TSSclassifier=NA | |||
|UniProt=D3YZP3 | |UniProt=D3YZP3 | ||
|association_with_transcript=-38bp_to_ENSMUST00000127790_5end | |association_with_transcript=-38bp_to_ENSMUST00000127790_5end | ||
|cluster_id=chr7:51684308..51684349,+ | |||
|description=CAGE_peak_4_at_Lrrc4b_5end | |description=CAGE_peak_4_at_Lrrc4b_5end | ||
|id=chr7:51684308..51684349,+ | |id=chr7:51684308..51684349,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.31e-17!23;CL:0000337!1.31e-17!23;CL:0000221!1.43e-17!44;CL:0000133!1.43e-17!44;CL:0002319!3.15e-17!43;CL:0000540!4.46e-15!33;CL:0000047!4.46e-15!33;CL:0000031!4.46e-15!33;CL:0000404!4.46e-15!33;CL:0000055!2.66e-12!50;CL:0000393!1.49e-10!39;CL:0000211!1.49e-10!39 | |ontology_enrichment_celltype=CL:0000117!1.31e-17!23;CL:0000337!1.31e-17!23;CL:0000221!1.43e-17!44;CL:0000133!1.43e-17!44;CL:0002319!3.15e-17!43;CL:0000540!4.46e-15!33;CL:0000047!4.46e-15!33;CL:0000031!4.46e-15!33;CL:0000404!4.46e-15!33;CL:0000055!2.66e-12!50;CL:0000393!1.49e-10!39;CL:0000211!1.49e-10!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-31,23;CL:0000337,2.23e-31,23;CL:0002319,6.27e-26,43;CL:0000221,4.11e-25,44;CL:0000133,4.11e-25,44;CL:0000540,4.14e-21,33;CL:0000047,4.14e-21,33;CL:0000031,4.14e-21,33;CL:0000404,4.14e-21,33;CL:0000393,1.15e-16,39;CL:0000211,1.15e-16,39;CL:0002321,3.17e-12,70;CL:0002609,9.59e-08,6;CL:0002453,1.84e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.31e-37!73;UBERON:0005743!4.31e-37!73;UBERON:0000073!7.76e-36!75;UBERON:0001016!7.76e-36!75;UBERON:0004121!1.48e-31!102;UBERON:0000924!1.48e-31!102;UBERON:0006601!1.48e-31!102;UBERON:0002346!6.42e-31!71;UBERON:0003075!6.42e-31!71;UBERON:0007284!6.42e-31!71;UBERON:0001049!5.77e-30!52;UBERON:0005068!5.77e-30!52;UBERON:0006241!5.77e-30!52;UBERON:0007135!5.77e-30!52;UBERON:0000955!4.93e-28!50;UBERON:0006238!4.93e-28!50;UBERON:0000033!7.38e-28!63;UBERON:0002616!1.90e-27!49;UBERON:0003056!2.38e-23!49;UBERON:0003080!1.54e-22!40;UBERON:0002020!3.92e-22!34;UBERON:0002780!8.60e-22!39;UBERON:0001890!8.60e-22!39;UBERON:0006240!8.60e-22!39;UBERON:0002791!3.56e-18!29;UBERON:0003528!3.56e-18!29;UBERON:0001893!3.56e-18!29;UBERON:0000153!1.03e-14!94;UBERON:0007811!4.52e-14!86;UBERON:0000956!2.11e-12!21;UBERON:0001869!2.11e-12!21;UBERON:0000203!2.11e-12!21;UBERON:0002619!3.72e-10!17;UBERON:0003076!8.68e-08!12;UBERON:0003057!8.68e-08!12;UBERON:0002420!4.68e-07!8;UBERON:0007245!4.68e-07!8;UBERON:0010009!4.68e-07!8;UBERON:0010011!4.68e-07!8;UBERON:0000454!4.68e-07!8 | |ontology_enrichment_uberon=UBERON:0001017!4.31e-37!73;UBERON:0005743!4.31e-37!73;UBERON:0000073!7.76e-36!75;UBERON:0001016!7.76e-36!75;UBERON:0004121!1.48e-31!102;UBERON:0000924!1.48e-31!102;UBERON:0006601!1.48e-31!102;UBERON:0002346!6.42e-31!71;UBERON:0003075!6.42e-31!71;UBERON:0007284!6.42e-31!71;UBERON:0001049!5.77e-30!52;UBERON:0005068!5.77e-30!52;UBERON:0006241!5.77e-30!52;UBERON:0007135!5.77e-30!52;UBERON:0000955!4.93e-28!50;UBERON:0006238!4.93e-28!50;UBERON:0000033!7.38e-28!63;UBERON:0002616!1.90e-27!49;UBERON:0003056!2.38e-23!49;UBERON:0003080!1.54e-22!40;UBERON:0002020!3.92e-22!34;UBERON:0002780!8.60e-22!39;UBERON:0001890!8.60e-22!39;UBERON:0006240!8.60e-22!39;UBERON:0002791!3.56e-18!29;UBERON:0003528!3.56e-18!29;UBERON:0001893!3.56e-18!29;UBERON:0000153!1.03e-14!94;UBERON:0007811!4.52e-14!86;UBERON:0000956!2.11e-12!21;UBERON:0001869!2.11e-12!21;UBERON:0000203!2.11e-12!21;UBERON:0002619!3.72e-10!17;UBERON:0003076!8.68e-08!12;UBERON:0003057!8.68e-08!12;UBERON:0002420!4.68e-07!8;UBERON:0007245!4.68e-07!8;UBERON:0010009!4.68e-07!8;UBERON:0010011!4.68e-07!8;UBERON:0000454!4.68e-07!8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.81e-52,73;UBERON:0001016,2.46e-50,75;UBERON:0000073,6.56e-48,54;UBERON:0001049,7.92e-45,52;UBERON:0005068,7.92e-45,52;UBERON:0006241,7.92e-45,52;UBERON:0007135,7.92e-45,52;UBERON:0002020,8.02e-40,34;UBERON:0004121,6.89e-38,95;UBERON:0000924,6.89e-38,95;UBERON:0006601,6.89e-38,95;UBERON:0002346,3.75e-37,64;UBERON:0003075,3.75e-37,64;UBERON:0007284,3.75e-37,64;UBERON:0000955,4.73e-37,47;UBERON:0006238,4.73e-37,47;UBERON:0002616,5.13e-36,46;UBERON:0003528,1.97e-32,29;UBERON:0002791,1.97e-32,29;UBERON:0001893,1.97e-32,29;UBERON:0010371,7.07e-31,73;UBERON:0003080,7.90e-31,40;UBERON:0002780,1.59e-29,39;UBERON:0001890,1.59e-29,39;UBERON:0006240,1.59e-29,39;UBERON:0003056,9.12e-25,49;UBERON:0010314,1.07e-21,92;UBERON:0000956,1.12e-21,21;UBERON:0001869,1.12e-21,21;UBERON:0000203,1.12e-21,21;UBERON:0002619,1.67e-17,17;UBERON:0003076,8.17e-14,12;UBERON:0003057,8.17e-14,12;UBERON:0000025,2.43e-13,114;UBERON:0002420,9.13e-12,8;UBERON:0007245,9.13e-12,8;UBERON:0010009,9.13e-12,8;UBERON:0010011,9.13e-12,8;UBERON:0000454,9.13e-12,8;UBERON:0004111,1.18e-11,122;UBERON:0002021,1.07e-10,10;UBERON:0000411,1.07e-10,10;UBERON:0001950,1.07e-10,10;UBERON:0011216,6.06e-10,194;UBERON:0002240,1.20e-09,6;UBERON:0005174,1.20e-09,6;UBERON:0001137,1.20e-09,6;UBERON:0001948,2.32e-08,5;UBERON:0002315,2.32e-08,5;UBERON:0001954,3.22e-08,7;UBERON:0003022,3.22e-08,7;UBERON:0002421,3.22e-08,7;UBERON:0000349,3.22e-08,7;UBERON:0002600,3.22e-08,7;UBERON:0000369,1.15e-07,5;UBERON:0002435,1.15e-07,5;UBERON:0000204,1.15e-07,5;UBERON:0010082,1.15e-07,5;UBERON:0002950,6.46e-07,4;UBERON:0001891,6.46e-07,4;UBERON:0009616,6.46e-07,4;UBERON:0010286,6.46e-07,4 | |||
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| ||
|short_description=p4@Lrrc4b | |short_description=p4@Lrrc4b | ||
}} | }} |
Latest revision as of 19:13, 26 September 2015
Short description: | p4@Lrrc4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lrrc4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:747 |
Association with transcript: | -38bp_to_ENSMUST00000127790_5end |
EntrezGene: | Lrrc4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.23e-31 | 23 |
neuroblast (sensu Vertebrata) | 2.23e-31 | 23 |
neural cell | 6.27e-26 | 43 |
ectodermal cell | 4.11e-25 | 44 |
neurectodermal cell | 4.11e-25 | 44 |
neuron | 4.14e-21 | 33 |
neuronal stem cell | 4.14e-21 | 33 |
neuroblast | 4.14e-21 | 33 |
electrically signaling cell | 4.14e-21 | 33 |
electrically responsive cell | 1.15e-16 | 39 |
electrically active cell | 1.15e-16 | 39 |
embryonic cell | 3.17e-12 | 70 |
neuron of cerebral cortex | 9.59e-08 | 6 |
oligodendrocyte precursor cell | 1.84e-07 | 8 |