Personal tools

FFCP PHASE1:Mm9::chr4:155560181..155560200,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11603
|EntrezGene=11603
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=142bp_to_uc008wgg.1_5end
|association_with_transcript=142bp_to_uc008wgg.1_5end
|cluster_id=chr4:155560181..155560200,-
|description=CAGE_peak_5_at_Agrn_5end
|description=CAGE_peak_5_at_Agrn_5end
|id=chr4:155560181..155560200,-
|id=chr4:155560181..155560200,-
|ontology_enrichment_celltype=CL:0000117!1.45e-11!23;CL:0000337!1.45e-11!23;CL:0000221!1.03e-08!44;CL:0000133!1.03e-08!44;CL:0002319!1.73e-08!43;CL:0000540!3.28e-07!33;CL:0000047!3.28e-07!33;CL:0000031!3.28e-07!33;CL:0000404!3.28e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-14,23;CL:0000337,3.43e-14,23;CL:0002319,5.30e-12,43;CL:0000221,1.28e-11,44;CL:0000133,1.28e-11,44;CL:0000540,7.89e-09,33;CL:0000047,7.89e-09,33;CL:0000031,7.89e-09,33;CL:0000404,7.89e-09,33;CL:0002609,1.56e-07,6;CL:0000393,5.83e-07,39;CL:0000211,5.83e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!6.21e-30!63;UBERON:0002346!8.64e-30!71;UBERON:0003075!8.64e-30!71;UBERON:0007284!8.64e-30!71;UBERON:0001049!1.69e-29!52;UBERON:0005068!1.69e-29!52;UBERON:0006241!1.69e-29!52;UBERON:0007135!1.69e-29!52;UBERON:0000955!2.51e-29!50;UBERON:0006238!2.51e-29!50;UBERON:0003056!1.17e-28!49;UBERON:0002616!2.18e-28!49;UBERON:0001017!2.95e-28!73;UBERON:0005743!2.95e-28!73;UBERON:0003080!1.41e-27!40;UBERON:0000073!8.43e-27!75;UBERON:0001016!8.43e-27!75;UBERON:0002780!8.86e-27!39;UBERON:0001890!8.86e-27!39;UBERON:0006240!8.86e-27!39;UBERON:0004121!7.53e-25!102;UBERON:0000924!7.53e-25!102;UBERON:0006601!7.53e-25!102;UBERON:0002020!9.61e-24!34;UBERON:0002791!1.70e-23!29;UBERON:0003528!1.70e-23!29;UBERON:0001893!1.70e-23!29;UBERON:0000956!1.34e-17!21;UBERON:0001869!1.34e-17!21;UBERON:0000203!1.34e-17!21;UBERON:0007811!1.31e-15!86;UBERON:0000153!3.77e-15!94;UBERON:0002619!6.29e-15!17;UBERON:0000025!7.34e-10!114;UBERON:0004111!8.55e-10!122;UBERON:0002021!1.06e-09!10;UBERON:0000411!1.06e-09!10;UBERON:0001950!1.06e-09!10;UBERON:0002420!5.11e-07!8;UBERON:0007245!5.11e-07!8;UBERON:0010009!5.11e-07!8;UBERON:0010011!5.11e-07!8;UBERON:0000454!5.11e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000955,5.11e-47,47;UBERON:0006238,5.11e-47,47;UBERON:0003528,3.14e-45,29;UBERON:0002791,3.14e-45,29;UBERON:0001893,3.14e-45,29;UBERON:0002616,4.84e-45,46;UBERON:0000073,3.74e-44,54;UBERON:0003080,3.87e-44,40;UBERON:0001049,1.07e-43,52;UBERON:0005068,1.07e-43,52;UBERON:0006241,1.07e-43,52;UBERON:0007135,1.07e-43,52;UBERON:0001017,1.04e-42,73;UBERON:0002780,2.01e-42,39;UBERON:0001890,2.01e-42,39;UBERON:0006240,2.01e-42,39;UBERON:0001016,2.63e-41,75;UBERON:0002020,2.64e-40,34;UBERON:0000956,7.36e-35,21;UBERON:0001869,7.36e-35,21;UBERON:0000203,7.36e-35,21;UBERON:0003056,1.74e-34,49;UBERON:0002346,8.78e-34,64;UBERON:0003075,8.78e-34,64;UBERON:0007284,8.78e-34,64;UBERON:0002619,6.41e-32,17;UBERON:0004121,1.63e-30,95;UBERON:0000924,1.63e-30,95;UBERON:0006601,1.63e-30,95;UBERON:0010371,1.74e-28,73;UBERON:0010314,1.04e-20,92;UBERON:0002021,5.07e-20,10;UBERON:0000411,5.07e-20,10;UBERON:0001950,5.07e-20,10;UBERON:0000025,5.97e-15,114;UBERON:0004111,2.25e-13,122;UBERON:0001954,3.74e-13,7;UBERON:0003022,3.74e-13,7;UBERON:0002421,3.74e-13,7;UBERON:0000349,3.74e-13,7;UBERON:0002600,3.74e-13,7;UBERON:0002420,3.91e-11,8;UBERON:0007245,3.91e-11,8;UBERON:0010009,3.91e-11,8;UBERON:0010011,3.91e-11,8;UBERON:0000454,3.91e-11,8;UBERON:0000369,2.86e-10,5;UBERON:0002435,2.86e-10,5;UBERON:0000204,2.86e-10,5;UBERON:0010082,2.86e-10,5;UBERON:0011216,8.75e-10,194
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,3.07560655828261,4.08302788055995,1.1198913730029,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,3.07374644257244,1.55534418462716,1.35005938331691,0.841299845405528,0,0.441737081903227,3.06226998037385,3.1629005436018,1.83843757322004,0,1.65993539510744,1.0752457327937,3.42904348098504,2.47016637726506,3.64639359389732,0.837548997004143,1.12552522006336,1.5279824777681,0.294628585473668,0.569486723196412,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0.628340120440365,0,0,0,0,2.99581278809645,8.23501085073528,4.64921102817598,7.99591872884472,10.4843337505436,2.90903262383384,5.84068547043927,0.101839363850316,0.248813941220186,0.505445516867349,0.210441855886474,0.520481771850815,0,0.360124259610698,0.30140963567143,0.272145996605311,0.512454881139399,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,0.657587197282725,0,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0,0,0,0.292399974850665,0,0.134206418760372,9.2527577368216,1.54356918568927,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0.788175720530955,0,0,0.163863314715738,0,0,0,0,0,0,1.28440471990234,1.52375192569864,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,7.71171159412337,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.36012218806262,0.646793418913773,0.214337035031592,1.06404140185364,0.535106452806212,0,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,3.95326289831947,4.60325236507177,4.01026859407578,4.29632955859219,4.11049511862385,8.3093328712867,6.75022500231806,8.10578165803597,6.79713613476307,7.7664046762773,0,1.19707462020309,0.512200817262403,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0,0.448176066834085,0.574354689556133,0.952587382566147,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.581385666529314,0.564656282491984,0.25384382367503,0.73171189149109,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.619747364743864,1.35034627686799,1.24905288968973,0.233931608445408,0,0,0,0
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,3.07560655828261,4.08302788055995,1.1198913730029,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,3.07374644257244,1.55534418462716,1.35005938331691,0.841299845405528,0,0.441737081903227,3.06226998037385,3.1629005436018,1.83843757322004,0,1.65993539510744,1.0752457327937,3.42904348098504,2.47016637726506,3.64639359389732,0.837548997004143,1.12552522006336,1.5279824777681,0.294628585473668,0.569486723196412,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0.461230994512117,0.301445281105245,0.470354828542819,0,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0.628340120440365,0,0,0,0,2.99581278809645,8.23501085073528,4.64921102817598,7.99591872884472,10.4843337505436,2.90903262383384,5.84068547043927,0.101839363850316,0.248813941220186,0.505445516867349,0.210441855886474,0.520481771850815,0,0.360124259610698,0.30140963567143,0.272145996605311,0.512454881139399,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,0.657587197282725,0,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0,0,0,0.292399974850665,0,0.134206418760372,9.2527577368216,1.54356918568927,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0.195133647857799,0.788175720530955,0,0,0.163863314715738,0,0,0,0,0,0,1.28440471990234,1.52375192569864,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,7.71171159412337,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.36012218806262,0.646793418913773,0.214337035031592,1.06404140185364,0.535106452806212,0,0.913394847343798,0,0,0.220528398054962,0,0,0,0,0.164140899745061,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,3.95326289831947,4.60325236507177,4.01026859407578,4.29632955859219,4.11049511862385,8.3093328712867,6.75022500231806,8.10578165803597,6.79713613476307,7.7664046762773,0,1.19707462020309,0.512200817262403,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0,0.448176066834085,0.574354689556133,0.952587382566147,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.581385666529314,0.564656282491984,0.25384382367503,0.73171189149109,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.619747364743864,1.35034627686799,1.24905288968973,0.233931608445408,0,0,0,0
|short_description=p5@Agrn
|short_description=p5@Agrn
}}
}}

Latest revision as of 20:40, 26 September 2015

Short description:p5@Agrn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Agrn_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 142bp_to_uc008wgg.1_5end
EntrezGene:Agrn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Agrn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D58.00
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B25.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
brain5.11e-4747
future brain5.11e-4747
brain grey matter3.14e-4529
regional part of telencephalon3.14e-4529
telencephalon3.14e-4529
regional part of brain4.84e-4546
regional part of nervous system3.74e-4454
anterior neural tube3.87e-4440
neural tube1.07e-4352
neural rod1.07e-4352
future spinal cord1.07e-4352
neural keel1.07e-4352
central nervous system1.04e-4273
regional part of forebrain2.01e-4239
forebrain2.01e-4239
future forebrain2.01e-4239
nervous system2.63e-4175
gray matter2.64e-4034
cerebral cortex7.36e-3521
cerebral hemisphere7.36e-3521
pallium7.36e-3521
pre-chordal neural plate1.74e-3449
neurectoderm8.78e-3464
neural plate8.78e-3464
presumptive neural plate8.78e-3464
regional part of cerebral cortex6.41e-3217
ectoderm-derived structure1.63e-3095
ectoderm1.63e-3095
presumptive ectoderm1.63e-3095
ecto-epithelium1.74e-2873
structure with developmental contribution from neural crest1.04e-2092
occipital lobe5.07e-2010
visual cortex5.07e-2010
neocortex5.07e-2010
tube5.97e-15114
anatomical conduit2.25e-13122
Ammon's horn3.74e-137
lobe parts of cerebral cortex3.74e-137
hippocampal formation3.74e-137
limbic system3.74e-137
limbic lobe3.74e-137
basal ganglion3.91e-118
nuclear complex of neuraxis3.91e-118
aggregate regional part of brain3.91e-118
collection of basal ganglia3.91e-118
cerebral subcortex3.91e-118
corpus striatum2.86e-105
striatum2.86e-105
ventral part of telencephalon2.86e-105
future corpus striatum2.86e-105
organ system subdivision8.75e-10194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:155560181..155560200,-&oldid=4273187"