FFCP PHASE1:Mm9::chr16:41533441..41533473,+: Difference between revisions
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{{FFCP|EntrezGene=268890|HGNC=|MCL_coexpression_id=121|UniProt=Q8BLK3|association_with_transcript=0bp_to_NM_175548,uc007zfs.1,uc007zft.1_5end|description=CAGE_peak_5_at_Lsamp_5end|id=chr16:41533441..41533473,+|ontology_enrichment_celltype=CL:0000221!3.69e-09!44;CL:0000133!3.69e-09!44;CL:0000117!4.73e-09!23;CL:0000337!4.73e-09!23;CL:0002319!9.39e-09!43;CL:0000540!3.33e-07!33;CL:0000047!3.33e-07!33;CL:0000031!3.33e-07!33;CL:0000404!3.33e-07!33|ontology_enrichment_celltype_v019_2=CL:0000221,2.84e-09,44;CL:0000133,2.84e-09,44;CL:0000117,7.27e-09,23;CL:0000337,7.27e-09,23;CL:0002319,1.10e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.23e-26!63;UBERON:0004121!2.73e-26!102;UBERON:0000924!2.73e-26!102;UBERON:0006601!2.73e-26!102;UBERON:0001017!1.55e-24!73;UBERON:0005743!1.55e-24!73;UBERON:0000073!4.78e-24!75;UBERON:0001016!4.78e-24!75;UBERON:0001049!3.82e-22!52;UBERON:0005068!3.82e-22!52;UBERON:0006241!3.82e-22!52;UBERON:0007135!3.82e-22!52;UBERON:0002346!9.64e-22!71;UBERON:0003075!9.64e-22!71;UBERON:0007284!9.64e-22!71;UBERON:0000955!5.50e-21!50;UBERON:0006238!5.50e-21!50;UBERON:0002616!2.63e-20!49;UBERON:0003056!2.43e-19!49;UBERON:0002020!6.65e-17!34;UBERON:0003080!1.21e-15!40;UBERON:0000153!4.94e-15!94;UBERON:0002780!5.96e-15!39;UBERON:0001890!5.96e-15!39;UBERON:0006240!5.96e-15!39;UBERON:0007811!4.38e-14!86;UBERON:0002791!7.54e-14!29;UBERON:0003528!7.54e-14!29;UBERON:0001893!7.54e-14!29;UBERON:0000956!1.21e-09!21;UBERON:0001869!1.21e-09!21;UBERON:0000203!1.21e-09!21;UBERON:0002619!3.02e-09!17;UBERON:0002021!1.46e-07!10;UBERON:0000411!1.46e-07!10;UBERON:0001950!1.46e-07!10;UBERON:0003076!2.96e-07!12;UBERON:0003057!2.96e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.29e-30,95;UBERON:0000924,1.29e-30,95;UBERON:0006601,1.29e-30,95;UBERON:0001017,3.88e-29,73;UBERON:0001016,6.03e-28,75;UBERON:0002346,1.10e-27,64;UBERON:0003075,1.10e-27,64;UBERON:0007284,1.10e-27,64;UBERON:0000073,1.55e-27,54;UBERON:0010371,2.09e-26,73;UBERON:0001049,2.48e-25,52;UBERON:0005068,2.48e-25,52;UBERON:0006241,2.48e-25,52;UBERON:0007135,2.48e-25,52;UBERON:0010314,7.30e-22,92;UBERON:0002020,9.59e-21,34;UBERON:0000955,2.89e-20,47;UBERON:0006238,2.89e-20,47;UBERON:0002616,2.93e-19,46;UBERON:0003056,9.34e-19,49;UBERON:0003528,8.56e-16,29;UBERON:0002791,8.56e-16,29;UBERON:0001893,8.56e-16,29;UBERON:0003080,9.13e-15,40;UBERON:0002780,8.97e-14,39;UBERON:0001890,8.97e-14,39;UBERON:0006240,8.97e-14,39;UBERON:0003076,3.07e-12,12;UBERON:0003057,3.07e-12,12;UBERON:0002021,4.59e-12,10;UBERON:0000411,4.59e-12,10;UBERON:0001950,4.59e-12,10;UBERON:0004111,1.97e-10,122;UBERON:0002619,2.24e-10,17;UBERON:0000956,3.94e-09,21;UBERON:0001869,3.94e-09,21;UBERON:0000203,3.94e-09,21;UBERON:0000025,1.17e-08,114;UBERON:0002420,1.50e-08,8;UBERON:0007245,1.50e-08,8;UBERON:0010009,1.50e-08,8;UBERON:0010011,1.50e-08,8;UBERON:0000454,1.50e-08,8;UBERON:0002240,8.58e-08,6;UBERON:0005174,8.58e-08,6;UBERON:0001137,8.58e-08,6;UBERON:0000020,4.33e-07,12;UBERON:0001032,4.33e-07,12;UBERON:0004456,4.33e-07,12|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.439372365468944,1.74986909166855,1.1198913730029,2.87505128729943,0,0,0,0,0,0,1.82084814773638,0,0.633831403506179,0,0,0,0,0,2.39680088414724,3.45796474789399,0.414758449233911,0.675029691658453,0.420649922702764,10.5690864229407,8.39300455616131,0.734944795289724,0.766763768145891,0.919218786610021,6.60695285996332,14.939418555967,12.2885226604995,1.58263545276233,1.46380229763855,1.04182674111352,15.9134309430787,14.069065250792,14.6686317865738,4.41942878210502,6.12198227436143,2.60959224155421,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0.890652834388949,0.346970653532272,0,0,0.301445281105245,0,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0,0.969750506270444,0,30.1564220921894,26.8091784721222,0,0,0,0,12.4326230706003,5.49000723382352,2.1361239859187,7.64827008846016,8.95004100656157,16.4152555202052,10.8701646255398,0.509196819251581,0.248813941220186,0.252722758433675,1.47309299120532,0.520481771850815,0.919608417733892,2.52086981727489,1.05493372485001,3.26575195926374,1.7935920839879,2.15513966487376,4.13925393182425,0.215567992932842,0.945530400839096,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,2.05782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0,0,0.116765342367169,0.493679549740441,0.492502392237286,1.21603214318784,1.16959989940266,1.53685080703735,1.07365135008297,11.3556572224629,3.39585220851639,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0.569003702859245,0.228497025219458,2.25415471346161,0,0,0.420814919341911,0.063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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268890 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BLK3 | |||
|association_with_transcript=0bp_to_NM_175548,uc007zfs.1,uc007zft.1_5end | |||
|cluster_id=chr16:41533441..41533473,+ | |||
|description=CAGE_peak_5_at_Lsamp_5end | |||
|id=chr16:41533441..41533473,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.69e-09!44;CL:0000133!3.69e-09!44;CL:0000117!4.73e-09!23;CL:0000337!4.73e-09!23;CL:0002319!9.39e-09!43;CL:0000540!3.33e-07!33;CL:0000047!3.33e-07!33;CL:0000031!3.33e-07!33;CL:0000404!3.33e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.84e-09,44;CL:0000133,2.84e-09,44;CL:0000117,7.27e-09,23;CL:0000337,7.27e-09,23;CL:0002319,1.10e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.23e-26!63;UBERON:0004121!2.73e-26!102;UBERON:0000924!2.73e-26!102;UBERON:0006601!2.73e-26!102;UBERON:0001017!1.55e-24!73;UBERON:0005743!1.55e-24!73;UBERON:0000073!4.78e-24!75;UBERON:0001016!4.78e-24!75;UBERON:0001049!3.82e-22!52;UBERON:0005068!3.82e-22!52;UBERON:0006241!3.82e-22!52;UBERON:0007135!3.82e-22!52;UBERON:0002346!9.64e-22!71;UBERON:0003075!9.64e-22!71;UBERON:0007284!9.64e-22!71;UBERON:0000955!5.50e-21!50;UBERON:0006238!5.50e-21!50;UBERON:0002616!2.63e-20!49;UBERON:0003056!2.43e-19!49;UBERON:0002020!6.65e-17!34;UBERON:0003080!1.21e-15!40;UBERON:0000153!4.94e-15!94;UBERON:0002780!5.96e-15!39;UBERON:0001890!5.96e-15!39;UBERON:0006240!5.96e-15!39;UBERON:0007811!4.38e-14!86;UBERON:0002791!7.54e-14!29;UBERON:0003528!7.54e-14!29;UBERON:0001893!7.54e-14!29;UBERON:0000956!1.21e-09!21;UBERON:0001869!1.21e-09!21;UBERON:0000203!1.21e-09!21;UBERON:0002619!3.02e-09!17;UBERON:0002021!1.46e-07!10;UBERON:0000411!1.46e-07!10;UBERON:0001950!1.46e-07!10;UBERON:0003076!2.96e-07!12;UBERON:0003057!2.96e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.29e-30,95;UBERON:0000924,1.29e-30,95;UBERON:0006601,1.29e-30,95;UBERON:0001017,3.88e-29,73;UBERON:0001016,6.03e-28,75;UBERON:0002346,1.10e-27,64;UBERON:0003075,1.10e-27,64;UBERON:0007284,1.10e-27,64;UBERON:0000073,1.55e-27,54;UBERON:0010371,2.09e-26,73;UBERON:0001049,2.48e-25,52;UBERON:0005068,2.48e-25,52;UBERON:0006241,2.48e-25,52;UBERON:0007135,2.48e-25,52;UBERON:0010314,7.30e-22,92;UBERON:0002020,9.59e-21,34;UBERON:0000955,2.89e-20,47;UBERON:0006238,2.89e-20,47;UBERON:0002616,2.93e-19,46;UBERON:0003056,9.34e-19,49;UBERON:0003528,8.56e-16,29;UBERON:0002791,8.56e-16,29;UBERON:0001893,8.56e-16,29;UBERON:0003080,9.13e-15,40;UBERON:0002780,8.97e-14,39;UBERON:0001890,8.97e-14,39;UBERON:0006240,8.97e-14,39;UBERON:0003076,3.07e-12,12;UBERON:0003057,3.07e-12,12;UBERON:0002021,4.59e-12,10;UBERON:0000411,4.59e-12,10;UBERON:0001950,4.59e-12,10;UBERON:0004111,1.97e-10,122;UBERON:0002619,2.24e-10,17;UBERON:0000956,3.94e-09,21;UBERON:0001869,3.94e-09,21;UBERON:0000203,3.94e-09,21;UBERON:0000025,1.17e-08,114;UBERON:0002420,1.50e-08,8;UBERON:0007245,1.50e-08,8;UBERON:0010009,1.50e-08,8;UBERON:0010011,1.50e-08,8;UBERON:0000454,1.50e-08,8;UBERON:0002240,8.58e-08,6;UBERON:0005174,8.58e-08,6;UBERON:0001137,8.58e-08,6;UBERON:0000020,4.33e-07,12;UBERON:0001032,4.33e-07,12;UBERON:0004456,4.33e-07,12 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.439372365468944,1.74986909166855,1.1198913730029,2.87505128729943,0,0,0,0,0,0,1.82084814773638,0,0.633831403506179,0,0,0,0,0,2.39680088414724,3.45796474789399,0.414758449233911,0.675029691658453,0.420649922702764,10.5690864229407,8.39300455616131,0.734944795289724,0.766763768145891,0.919218786610021,6.60695285996332,14.939418555967,12.2885226604995,1.58263545276233,1.46380229763855,1.04182674111352,15.9134309430787,14.069065250792,14.6686317865738,4.41942878210502,6.12198227436143,2.60959224155421,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0.890652834388949,0.346970653532272,0,0,0.301445281105245,0,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0,0.969750506270444,0,30.1564220921894,26.8091784721222,0,0,0,0,12.4326230706003,5.49000723382352,2.1361239859187,7.64827008846016,8.95004100656157,16.4152555202052,10.8701646255398,0.509196819251581,0.248813941220186,0.252722758433675,1.47309299120532,0.520481771850815,0.919608417733892,2.52086981727489,1.05493372485001,3.26575195926374,1.7935920839879,2.15513966487376,4.13925393182425,0.215567992932842,0.945530400839096,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,2.05782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0,0,0.116765342367169,0.493679549740441,0.492502392237286,1.21603214318784,1.16959989940266,1.53685080703735,1.07365135008297,11.3556572224629,3.39585220851639,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0.569003702859245,0.228497025219458,2.25415471346161,0,0,0.420814919341911,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0.518054945597687,0,0,0,0,0,16.8578119487182,16.2924244363162,0,0.252470927204373,0,0,0.430846795465598,0,0.668396022247182,1.98153571552183,0,0.292255857911312,0.395287777946524,8.03303291054518,0.851640511249612,0.178065603667255,1.14020871547503,2.47455184458803,1.32745138339963,0,0.604647113929502,0.188605079755898,0,0,0,0,0,0.948110273807448,0,0,1.02131881726136,0,0.517434735131018,0.643011105094777,0.709360934569094,0.535106452806212,0.987294123612726,0.304464949114599,0,0,0,0.65954501176592,0.484393280087717,0.904693873922338,1.07435109602823,0.328281799490123,0,15.3903000668723,0,1.23832120777933,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.432021363287205,0,0,0.269728692769641,0.826534557253359,1.04702376793612,0.518459893167171,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.911430693907651,0.629156066554265,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0,0,0,0,0,0.0962118416403295,0,1.36038230169127,0,0,0,1.54551675225752,0.187682475451182,1.83151624267265,1.50057865355346,0,5.64751842617067,5.9842280745933,8.02053718815155,7.90524638780963,6.16574267793578,9.82012066606611,11.4753825039407,5.85417564191487,5.43770890781046,12.4262474820437,0.103787347584177,1.19707462020309,0,0,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,0.576226371643824,1.20614484806788,0.952587382566147,1.0429589335037,0.578727661391115,1.64834360321323,1.47198920134397,0.685738504770831,1.24233064311536,0.953744759789284,0.581385666529314,0.941093804153306,0.423073039458382,0.365855945745545,0.789209134313529,0.814824683075171,0,0.949080144993393,0.985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,2.49810577937946,0.233931608445408,0.214871054048298,0.956441660344217,1.76473135295612,0.695603506861264 | |||
|short_description=p5@Lsamp | |||
}} |
Latest revision as of 00:27, 2 October 2015
Short description: | p5@Lsamp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lsamp_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | 0bp_to_NM_175548, uc007zfs.1, uc007zft.1_5end |
EntrezGene: | Lsamp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.84e-09 | 44 |
neurectodermal cell | 2.84e-09 | 44 |
CNS neuron (sensu Vertebrata) | 7.27e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.27e-09 | 23 |
neural cell | 1.10e-08 | 43 |