FFCP PHASE1:Mm9::chr9:62384774..62384793,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235431 | |EntrezGene=235431 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENSMUST00000123379_5end | |association_with_transcript=-7bp_to_ENSMUST00000123379_5end | ||
|cluster_id=chr9:62384774..62384793,- | |||
|description=CAGE_peak_4_at_Coro2b_5end | |description=CAGE_peak_4_at_Coro2b_5end | ||
|id=chr9:62384774..62384793,- | |id=chr9:62384774..62384793,- | ||
|ontology_enrichment_celltype=CL:0002319!5.36e-15!43;CL:0000221!7.57e-15!44;CL:0000133!7.57e-15!44;CL:0000540!1.36e-12!33;CL:0000047!1.36e-12!33;CL:0000031!1.36e-12!33;CL:0000404!1.36e-12!33;CL:0000055!1.39e-11!50;CL:0000393!8.04e-10!39;CL:0000211!8.04e-10!39;CL:0000117!3.41e-08!23;CL:0000337!3.41e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.58e-22,43;CL:0000221,2.09e-21,44;CL:0000133,2.09e-21,44;CL:0000540,2.91e-20,33;CL:0000047,2.91e-20,33;CL:0000031,2.91e-20,33;CL:0000404,2.91e-20,33;CL:0000393,1.06e-15,39;CL:0000211,1.06e-15,39;CL:0000117,1.18e-13,23;CL:0000337,1.18e-13,23;CL:0002321,1.80e-09,70;CL:0000107,8.41e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.73e-31!102;UBERON:0000924!8.73e-31!102;UBERON:0006601!8.73e-31!102;UBERON:0000073!5.48e-29!75;UBERON:0001016!5.48e-29!75;UBERON:0001017!2.28e-28!73;UBERON:0005743!2.28e-28!73;UBERON:0002346!6.24e-23!71;UBERON:0003075!6.24e-23!71;UBERON:0007284!6.24e-23!71;UBERON:0000033!2.83e-21!63;UBERON:0001049!3.33e-19!52;UBERON:0005068!3.33e-19!52;UBERON:0006241!3.33e-19!52;UBERON:0007135!3.33e-19!52;UBERON:0000955!2.19e-18!50;UBERON:0006238!2.19e-18!50;UBERON:0002616!3.76e-18!49;UBERON:0003056!3.60e-17!49;UBERON:0002020!1.83e-14!34;UBERON:0003080!1.10e-13!40;UBERON:0002780!4.35e-13!39;UBERON:0001890!4.35e-13!39;UBERON:0006240!4.35e-13!39;UBERON:0002791!4.44e-12!29;UBERON:0003528!4.44e-12!29;UBERON:0001893!4.44e-12!29;UBERON:0000153!8.72e-11!94;UBERON:0000025!7.52e-10!114;UBERON:0007811!8.34e-10!86;UBERON:0004111!2.13e-09!122;UBERON:0000956!1.73e-08!21;UBERON:0001869!1.73e-08!21;UBERON:0000203!1.73e-08!21;UBERON:0002619!5.37e-07!17;UBERON:0000468!5.68e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.03e-42,73;UBERON:0001016,6.67e-42,75;UBERON:0004121,2.47e-40,95;UBERON:0000924,2.47e-40,95;UBERON:0006601,2.47e-40,95;UBERON:0002346,7.50e-36,64;UBERON:0003075,7.50e-36,64;UBERON:0007284,7.50e-36,64;UBERON:0000073,3.70e-32,54;UBERON:0010371,8.56e-31,73;UBERON:0001049,1.39e-29,52;UBERON:0005068,1.39e-29,52;UBERON:0006241,1.39e-29,52;UBERON:0007135,1.39e-29,52;UBERON:0002616,3.27e-24,46;UBERON:0000955,1.98e-23,47;UBERON:0006238,1.98e-23,47;UBERON:0003056,3.42e-23,49;UBERON:0002020,3.37e-22,34;UBERON:0010314,1.23e-21,92;UBERON:0003080,1.63e-19,40;UBERON:0002780,1.59e-18,39;UBERON:0001890,1.59e-18,39;UBERON:0006240,1.59e-18,39;UBERON:0003528,4.11e-18,29;UBERON:0002791,4.11e-18,29;UBERON:0001893,4.11e-18,29;UBERON:0000956,5.36e-12,21;UBERON:0001869,5.36e-12,21;UBERON:0000203,5.36e-12,21;UBERON:0000025,1.09e-11,114;UBERON:0003076,9.48e-11,12;UBERON:0003057,9.48e-11,12;UBERON:0004111,5.66e-10,122;UBERON:0002619,1.83e-09,17;UBERON:0002410,8.41e-09,9;UBERON:0011216,1.39e-08,194;UBERON:0002021,3.48e-08,10;UBERON:0000411,3.48e-08,10;UBERON:0001950,3.48e-08,10;UBERON:0000010,4.15e-08,11;UBERON:0000483,6.39e-08,174;UBERON:0000119,1.20e-07,176;UBERON:0002420,1.83e-07,8;UBERON:0007245,1.83e-07,8;UBERON:0010009,1.83e-07,8;UBERON:0010011,1.83e-07,8;UBERON:0000454,1.83e-07,8 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0,4.36050312760893,1.31811709640683,0.972149495371417,0.419959264876088,4.31257693094915,0,0,0,0,0.573066879877513,0,1.82084814773638,0.528990979272033,0,0.338844532069132,0,0,0,0,2.09720077362883,4.61061966385865,1.14058573539325,1.35005938331691,1.05162480675691,2.28520787523043,1.32521124570968,1.10241719293459,1.24599112323707,0,6.60695285996332,5.10749352340751,6.29786786350598,1.31886287730194,1.55528994124096,1.04182674111352,5.30447698102624,2.25105044012672,5.34793867218835,3.24091444021034,1.70846016958924,1.4911955666024,0.908714319998209,1.13357340160178,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.29688427812965,0.520455980298408,0,0.230615497256059,0.60289056221049,1.05829836422134,0.376999773989026,0.494389935468748,0.578397427679647,0,0.970601099684455,0,0.969750506270444,0,16.1029438356351,12.1479089951804,0,0.11981512450592,0,0,3.59497534571574,2.74500361691176,1.00523481690292,4.69325664519146,3.06858548796397,3.94797284663164,3.73154905055843,0.509196819251581,0.373220911830279,1.26361379216837,0.841767423545896,1.17108398666433,0.919608417733892,1.0803727788321,1.20563854268572,2.10913147369116,1.7935920839879,2.81105173679186,3.3631438196072,0.215567992932842,0.567318240503458,0.879755620819744,0.43839146485515,0.278047249225598,1.39300866608867,1.4404749548556,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,0.462801338662135,0,0.536546802799238,0.233530684734339,1.15191894939436,0.492502392237286,0.405344047729279,0.438599962275997,0.439100230582101,0.268412837520744,2.73376933133365,1.54356918568927,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.198956472041151,0,0,0.432276099749388,0.398282546508734,0.189667900953082,0.456994050438915,0,0,0.193952487167626,0.841629838683823,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.554259570499814,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.952174563544055,0.975668239288994,1.26108115284953,1.32878813789265,1.2756381492599,1.3109065177259,1.20879487306127,1.3018415272336,0,0,0.491764273019036,0.551873492609465,4.49541651965817,2.93029216480508,0.163934945376675,0.252470927204373,1.26203287766503,1.17131623288992,2.58508077279359,2.62865677747807,1.78238939265915,4.52922449262132,4.04810701674894,2.92255857911312,1.58115111178609,0.963963949265421,0.283880170416537,0.534196811001766,0.651547837414304,0,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0.712994756769443,0.632073515871632,0,0,2.7235168460303,0,0.776152102696527,0,0.886701168211368,1.42695054081656,0.493647061806363,1.8267896946876,0.469343416127421,0,0.220528398054962,1.6488625294148,0.161464426695906,0.542816324353403,0.119372344003136,0.328281799490123,0.291480836629851,3.8939313422207,0,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0,0.138199973804424,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.87345025498471,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.704143431874524,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.405450430580328,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0.221985953374065,0,0.167884616364078,0.386379188064381,0.375364950902364,0.183151624267265,0,0.501572104035363,2.25900737046827,3.22227665555024,2.29158205375759,2.57779773515531,0.685082519770642,3.7769694869485,1.35004500046361,2.70192721934532,2.26571204492102,2.5888015587591,0.103787347584177,0,0.512200817262403,0.243106717068294,0.419226325255965,0.551530525350042,0.44449345560323,1.23621034343337,0,0.758091635291392,0.760437899670719,0.377252682772152,0.561849044819294,0.448176066834085,0.804096565378586,0.476293691283074,0.695305955669133,0,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,1.43061713968393,1.0174249164263,1.12931256498397,0.592302255241736,1.28049581010941,0.526139422875686,0.679020569229309,0.561142271657738,0.949080144993393,0.886540341380071,0.409231043169689,0.619747364743864,1.73615949883027,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,1.76473135295612,0.463735671240843 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0,0,4.36050312760893,1.31811709640683,0.972149495371417,0.419959264876088,4.31257693094915,0,0,0,0,0.573066879877513,0,1.82084814773638,0.528990979272033,0,0.338844532069132,0,0,0,0,2.09720077362883,4.61061966385865,1.14058573539325,1.35005938331691,1.05162480675691,2.28520787523043,1.32521124570968,1.10241719293459,1.24599112323707,0,6.60695285996332,5.10749352340751,6.29786786350598,1.31886287730194,1.55528994124096,1.04182674111352,5.30447698102624,2.25105044012672,5.34793867218835,3.24091444021034,1.70846016958924,1.4911955666024,0.908714319998209,1.13357340160178,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0.776813650941515,0.29688427812965,0.520455980298408,0,0.230615497256059,0.60289056221049,1.05829836422134,0.376999773989026,0.494389935468748,0.578397427679647,0,0.970601099684455,0,0.969750506270444,0,16.1029438356351,12.1479089951804,0,0.11981512450592,0,0,3.59497534571574,2.74500361691176,1.00523481690292,4.69325664519146,3.06858548796397,3.94797284663164,3.73154905055843,0.509196819251581,0.373220911830279,1.26361379216837,0.841767423545896,1.17108398666433,0.919608417733892,1.0803727788321,1.20563854268572,2.10913147369116,1.7935920839879,2.81105173679186,3.3631438196072,0.215567992932842,0.567318240503458,0.879755620819744,0.43839146485515,0.278047249225598,1.39300866608867,1.4404749548556,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.710234206755631,0.590292695242212,0.462801338662135,0,0.536546802799238,0.233530684734339,1.15191894939436,0.492502392237286,0.405344047729279,0.438599962275997,0.439100230582101,0.268412837520744,2.73376933133365,1.54356918568927,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0.198956472041151,0,0,0.432276099749388,0.398282546508734,0.189667900953082,0.456994050438915,0,0,0.193952487167626,0.841629838683823,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.554259570499814,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.952174563544055,0.975668239288994,1.26108115284953,1.32878813789265,1.2756381492599,1.3109065177259,1.20879487306127,1.3018415272336,0,0,0.491764273019036,0.551873492609465,4.49541651965817,2.93029216480508,0.163934945376675,0.252470927204373,1.26203287766503,1.17131623288992,2.58508077279359,2.62865677747807,1.78238939265915,4.52922449262132,4.04810701674894,2.92255857911312,1.58115111178609,0.963963949265421,0.283880170416537,0.534196811001766,0.651547837414304,0,1.32745138339963,0,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0.712994756769443,0.632073515871632,0,0,2.7235168460303,0,0.776152102696527,0,0.886701168211368,1.42695054081656,0.493647061806363,1.8267896946876,0.469343416127421,0,0.220528398054962,1.6488625294148,0.161464426695906,0.542816324353403,0.119372344003136,0.328281799490123,0.291480836629851,3.8939313422207,0,0.206386867963223,0.370389054739423,0,0.136694227721025,0,0,0,0.138199973804424,0,0.316335993581135,0.406638934253697,0.324016022465404,0.209088296014469,0.87345025498471,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,0.704143431874524,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.405450430580328,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0.221985953374065,0,0.167884616364078,0.386379188064381,0.375364950902364,0.183151624267265,0,0.501572104035363,2.25900737046827,3.22227665555024,2.29158205375759,2.57779773515531,0.685082519770642,3.7769694869485,1.35004500046361,2.70192721934532,2.26571204492102,2.5888015587591,0.103787347584177,0,0.512200817262403,0.243106717068294,0.419226325255965,0.551530525350042,0.44449345560323,1.23621034343337,0,0.758091635291392,0.760437899670719,0.377252682772152,0.561849044819294,0.448176066834085,0.804096565378586,0.476293691283074,0.695305955669133,0,1.23625770240992,0.588795680537589,0.342869252385415,0.532427418478012,1.43061713968393,1.0174249164263,1.12931256498397,0.592302255241736,1.28049581010941,0.526139422875686,0.679020569229309,0.561142271657738,0.949080144993393,0.886540341380071,0.409231043169689,0.619747364743864,1.73615949883027,0.499621155875892,0.467863216890817,0.859484216193193,0.57386499620653,1.76473135295612,0.463735671240843 | ||
|short_description=p4@Coro2b | |short_description=p4@Coro2b | ||
}} | }} |
Latest revision as of 23:24, 26 September 2015
Short description: | p4@Coro2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Coro2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | -7bp_to_ENSMUST00000123379_5end |
EntrezGene: | Coro2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.58e-22 | 43 |
ectodermal cell | 2.09e-21 | 44 |
neurectodermal cell | 2.09e-21 | 44 |
neuron | 2.91e-20 | 33 |
neuronal stem cell | 2.91e-20 | 33 |
neuroblast | 2.91e-20 | 33 |
electrically signaling cell | 2.91e-20 | 33 |
electrically responsive cell | 1.06e-15 | 39 |
electrically active cell | 1.06e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.18e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.18e-13 | 23 |
embryonic cell | 1.80e-09 | 70 |
autonomic neuron | 8.41e-09 | 9 |