FFCP PHASE1:Hg19::chr10:18429301..18429338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=783 | |EntrezGene=783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1402 | |HGNC=1402 | ||
|TSSclassifier=strong | |||
|UniProt=Q08289,Q6TME3,A6PVM6 | |UniProt=Q08289,Q6TME3,A6PVM6 | ||
|association_with_transcript=-267bp_to_ENST00000324631,NM_201593,NM_201596,NM_201597,uc001ipr.2,uc001ips.2,uc001ipt.2,uc009xjz.1_5end | |association_with_transcript=-267bp_to_ENST00000324631,NM_201593,NM_201596,NM_201597,uc001ipr.2,uc001ips.2,uc001ipt.2,uc009xjz.1_5end | ||
|cluster_id=chr10:18429301..18429338,+ | |||
|coexpression_cluster_id=C3004 | |||
|description=CAGE_peak_1_at_CACNB2_5end | |description=CAGE_peak_1_at_CACNB2_5end | ||
|id=chr10:18429301..18429338,+ | |id=chr10:18429301..18429338,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.20e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-50!115;UBERON:0005743!9.46e-41!86;UBERON:0001017!5.14e-40!82;UBERON:0000073!3.93e-39!94;UBERON:0001016!3.93e-39!94;UBERON:0002346!2.55e-37!90;UBERON:0001049!8.25e-37!57;UBERON:0005068!8.25e-37!57;UBERON:0006241!8.25e-37!57;UBERON:0007135!8.25e-37!57;UBERON:0000955!8.54e-36!69;UBERON:0006238!8.54e-36!69;UBERON:0002616!1.17e-35!59;UBERON:0003075!1.64e-35!86;UBERON:0007284!1.64e-35!86;UBERON:0000153!2.59e-32!129;UBERON:0007811!2.59e-32!129;UBERON:0000033!4.19e-32!123;UBERON:0000924!3.51e-31!173;UBERON:0006601!3.51e-31!173;UBERON:0003080!1.59e-29!42;UBERON:0004121!1.73e-29!169;UBERON:0002780!3.40e-29!41;UBERON:0001890!3.40e-29!41;UBERON:0006240!3.40e-29!41;UBERON:0003056!2.56e-28!61;UBERON:0001893!4.00e-25!34;UBERON:0002020!5.19e-25!34;UBERON:0003528!5.19e-25!34;UBERON:0001869!1.07e-24!32;UBERON:0002791!2.18e-24!33;UBERON:0000956!4.02e-19!25;UBERON:0000203!4.02e-19!25;UBERON:0002619!9.66e-18!22;UBERON:0001950!5.59e-16!20;UBERON:0000481!1.59e-15!347;UBERON:0000475!1.71e-14!365;UBERON:0000468!2.25e-14!659;UBERON:0000922!7.14e-13!612;UBERON:0000062!3.94e-12!511;UBERON:0002050!7.74e-11!605;UBERON:0005423!7.74e-11!605;UBERON:0000064!1.33e-10!219;UBERON:0000923!1.91e-10!604;UBERON:0005291!1.91e-10!604;UBERON:0006598!1.91e-10!604;UBERON:0002532!1.91e-10!604;UBERON:0000483!2.23e-09!309;UBERON:0000477!3.14e-09!286;UBERON:0000119!5.91e-09!312;UBERON:0000467!1.11e-08!625;UBERON:0000480!1.45e-08!626;UBERON:0003076!1.87e-08!15;UBERON:0003057!1.87e-08!15;UBERON:0002420!5.62e-08!9;UBERON:0007245!5.62e-08!9;UBERON:0010009!5.62e-08!9;UBERON:0010011!5.62e-08!9;UBERON:0000454!5.62e-08!9;UBERON:0000059!8.27e-08!11;UBERON:0004111!1.17e-07!241;UBERON:0001871!2.42e-07!7;UBERON:0004733!2.52e-07!12;UBERON:0002028!2.52e-07!12;UBERON:0007277!2.52e-07!12;UBERON:0002308!2.53e-07!9;UBERON:0000125!2.53e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.26e-50!115;UBERON:0005743!9.46e-41!86;UBERON:0001017!5.14e-40!82;UBERON:0000073!3.93e-39!94;UBERON:0001016!3.93e-39!94;UBERON:0002346!2.55e-37!90;UBERON:0001049!8.25e-37!57;UBERON:0005068!8.25e-37!57;UBERON:0006241!8.25e-37!57;UBERON:0007135!8.25e-37!57;UBERON:0000955!8.54e-36!69;UBERON:0006238!8.54e-36!69;UBERON:0002616!1.17e-35!59;UBERON:0003075!1.64e-35!86;UBERON:0007284!1.64e-35!86;UBERON:0000153!2.59e-32!129;UBERON:0007811!2.59e-32!129;UBERON:0000033!4.19e-32!123;UBERON:0000924!3.51e-31!173;UBERON:0006601!3.51e-31!173;UBERON:0003080!1.59e-29!42;UBERON:0004121!1.73e-29!169;UBERON:0002780!3.40e-29!41;UBERON:0001890!3.40e-29!41;UBERON:0006240!3.40e-29!41;UBERON:0003056!2.56e-28!61;UBERON:0001893!4.00e-25!34;UBERON:0002020!5.19e-25!34;UBERON:0003528!5.19e-25!34;UBERON:0001869!1.07e-24!32;UBERON:0002791!2.18e-24!33;UBERON:0000956!4.02e-19!25;UBERON:0000203!4.02e-19!25;UBERON:0002619!9.66e-18!22;UBERON:0001950!5.59e-16!20;UBERON:0000481!1.59e-15!347;UBERON:0000475!1.71e-14!365;UBERON:0000468!2.25e-14!659;UBERON:0000922!7.14e-13!612;UBERON:0000062!3.94e-12!511;UBERON:0002050!7.74e-11!605;UBERON:0005423!7.74e-11!605;UBERON:0000064!1.33e-10!219;UBERON:0000923!1.91e-10!604;UBERON:0005291!1.91e-10!604;UBERON:0006598!1.91e-10!604;UBERON:0002532!1.91e-10!604;UBERON:0000483!2.23e-09!309;UBERON:0000477!3.14e-09!286;UBERON:0000119!5.91e-09!312;UBERON:0000467!1.11e-08!625;UBERON:0000480!1.45e-08!626;UBERON:0003076!1.87e-08!15;UBERON:0003057!1.87e-08!15;UBERON:0002420!5.62e-08!9;UBERON:0007245!5.62e-08!9;UBERON:0010009!5.62e-08!9;UBERON:0010011!5.62e-08!9;UBERON:0000454!5.62e-08!9;UBERON:0000059!8.27e-08!11;UBERON:0004111!1.17e-07!241;UBERON:0001871!2.42e-07!7;UBERON:0004733!2.52e-07!12;UBERON:0002028!2.52e-07!12;UBERON:0007277!2.52e-07!12;UBERON:0002308!2.53e-07!9;UBERON:0000125!2.53e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.62e-35;32!UBERON:0002791;6.19e-33;32!UBERON:0001893;7.46e-33;34!UBERON:0003528;1.18e-32;34!UBERON:0002020;1.18e-32;34!UBERON:0002780;2.72e-30;41!UBERON:0001890;2.72e-30;41!UBERON:0000956;5.96e-29;25!UBERON:0000203;5.96e-29;25!UBERON:0002619;2.26e-28;22!UBERON:0000073;7.70e-27;53!UBERON:0002616;7.70e-27;53!UBERON:0001950;1.82e-25;20!UBERON:0000955;3.54e-20;68!UBERON:0001017;4.60e-19;75!UBERON:0001016;2.82e-17;83!UBERON:0007023;1.13e-14;114!UBERON:0000160;1.17e-12;17!UBERON:0011216;1.19e-12;132!UBERON:0000059;3.15e-12;11!UBERON:0004921;3.57e-12;33!UBERON:0002420;8.62e-11;9!UBERON:0007245;8.62e-11;9!UBERON:0010009;8.62e-11;9!UBERON:0010011;8.62e-11;9!UBERON:0000454;8.62e-11;9!UBERON:0005409;2.29e-10;22!UBERON:0001871;2.89e-10;6!UBERON:0001155;4.86e-10;9!UBERON:0000125;1.21e-09;9!UBERON:0002308;1.21e-09;9!UBERON:0000349;7.84e-09;5!UBERON:0004733;1.71e-08;12!UBERON:0002028;1.71e-08;12!UBERON:0000200;4.24e-08;6!UBERON:0009663;4.74e-08;7!UBERON:0000369;1.06e-07;4!UBERON:0002435;1.06e-07;4!UBERON:0000204;1.06e-07;4!UBERON:0004732;1.12e-07;13!UBERON:0002021;2.06e-07;5!UBERON:0000922;3.10e-07;49!UBERON:0002298;7.65e-07;6 | |||
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| ||
|short_description=p1@CACNB2 | |short_description=p1@CACNB2 | ||
}} | }} |
Latest revision as of 11:51, 17 September 2015
Short description: | p1@CACNB2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CACNB2_5end |
Coexpression cluster: | C3004_smooth_putamen_bladder_vagina_neuroectodermal_caudate_salivary |
Association with transcript: | -267bp_to_ENST00000324631, NM_201593, NM_201596, NM_201597, uc001ipr.2, uc001ips.2, uc001ipt.2, uc009xjz.1_5end |
EntrezGene: | CACNB2 |
HGNC: | 1402 |
UniProt: | Q08289Q6TME3A6PVM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data