FFCP PHASE1:Hg19::chr14:60097297..60097403,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6252 | |EntrezGene=6252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10467 | |HGNC=10467 | ||
|TSSclassifier=strong | |||
|UniProt=A8MT72 | |UniProt=A8MT72 | ||
|association_with_transcript=0bp_to_ENST00000395090,ENST00000557422_5end | |association_with_transcript=0bp_to_ENST00000395090,ENST00000557422_5end | ||
|cluster_id=chr14:60097297..60097403,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_RTN1_5end | |description=CAGE_peak_1_at_RTN1_5end | ||
|id=chr14:60097297..60097403,- | |id=chr14:60097297..60097403,- | ||
|ontology_enrichment_celltype=CL:0002319!2.15e-09!25;CL:0000047!4.93e-08!8 | |ontology_enrichment_celltype=CL:0002319!2.15e-09!25;CL:0000047!4.93e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.50e-10;25!CL:0002321;1.56e-09;15!CL:0000540;3.77e-08;6!CL:0000404;3.77e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.88e-11,8;CL:0002319,1.36e-10,25;CL:0000540,3.65e-08,6;CL:0000031,3.65e-08,6;CL:0000404,3.65e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.18e-16;82!CL:0000031;3.77e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.14e-42;32!UBERON:0001893;1.93e-42;34!UBERON:0002791;2.25e-42;32!UBERON:0003528;2.61e-42;34!UBERON:0002020;2.61e-42;34!UBERON:0002780;4.82e-41;41!UBERON:0001890;4.82e-41;41!UBERON:0000073;2.13e-38;53!UBERON:0002616;2.13e-38;53!UBERON:0000956;1.61e-37;25!UBERON:0000203;1.61e-37;25!UBERON:0002619;2.74e-34;22!UBERON:0001950;1.25e-31;20!UBERON:0001017;2.92e-28;75!UBERON:0000955;3.13e-28;68!UBERON:0001016;2.11e-26;83!UBERON:0002420;2.65e-13;9!UBERON:0007245;2.65e-13;9!UBERON:0010009;2.65e-13;9!UBERON:0010011;2.65e-13;9!UBERON:0000454;2.65e-13;9!UBERON:0000125;5.62e-13;9!UBERON:0002308;5.62e-13;9!UBERON:0004732;1.72e-12;13!UBERON:0007023;1.97e-12;114!UBERON:0004733;2.05e-11;12!UBERON:0002028;2.05e-11;12!UBERON:0001871;2.59e-11;6!UBERON:0011216;3.66e-11;132!UBERON:0009663;1.84e-10;7!UBERON:0000200;3.37e-10;6!UBERON:0001894;2.44e-09;7!UBERON:0002298;3.30e-09;6!UBERON:0002021;6.26e-09;5!UBERON:0001872;9.08e-09;5!UBERON:0000349;1.55e-08;5!UBERON:0002680;6.70e-08;9!UBERON:0001895;6.70e-08;9!UBERON:0000369;5.30e-07;4!UBERON:0002435;5.30e-07;4!UBERON:0000204;5.30e-07;4!UBERON:0010314;9.48e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.17e-78,81;UBERON:0001016,1.03e-77,89;UBERON:0001049,1.04e-71,56;UBERON:0005068,1.04e-71,56;UBERON:0006241,1.04e-71,56;UBERON:0007135,1.04e-71,56;UBERON:0000073,9.52e-68,53;UBERON:0002616,9.52e-68,53;UBERON:0000955,1.50e-61,68;UBERON:0006238,1.50e-61,68;UBERON:0003075,4.71e-61,82;UBERON:0007284,4.71e-61,82;UBERON:0002780,1.58e-57,41;UBERON:0001890,1.58e-57,41;UBERON:0003080,1.58e-57,41;UBERON:0006240,1.58e-57,41;UBERON:0002346,3.38e-57,86;UBERON:0001893,2.06e-49,34;UBERON:0003528,2.95e-49,34;UBERON:0002020,2.95e-49,34;UBERON:0001869,5.58e-47,32;UBERON:0010371,5.59e-47,104;UBERON:0003056,1.19e-46,61;UBERON:0002791,1.26e-46,32;UBERON:0004121,1.07e-43,171;UBERON:0000924,1.07e-43,171;UBERON:0006601,1.07e-43,171;UBERON:0007023,2.55e-42,114;UBERON:0011216,8.46e-38,223;UBERON:0000956,1.63e-37,25;UBERON:0000203,1.63e-37,25;UBERON:0002619,2.73e-34,22;UBERON:0010314,1.37e-33,132;UBERON:0001950,1.24e-31,20;UBERON:0000025,7.63e-19,192;UBERON:0003076,5.82e-15,15;UBERON:0003057,5.82e-15,15;UBERON:0004111,6.27e-14,240;UBERON:0002420,2.67e-13,9;UBERON:0007245,2.67e-13,9;UBERON:0010009,2.67e-13,9;UBERON:0010011,2.67e-13,9;UBERON:0000454,2.67e-13,9;UBERON:0000125,5.67e-13,9;UBERON:0002308,5.67e-13,9;UBERON:0004732,1.69e-12,13;UBERON:0000922,1.98e-11,592;UBERON:0004733,2.02e-11,12;UBERON:0002028,2.02e-11,12;UBERON:0007277,2.02e-11,12;UBERON:0001871,2.57e-11,6;UBERON:0000483,1.00e-10,306;UBERON:0002050,1.26e-10,564;UBERON:0009663,1.86e-10,7;UBERON:0000923,1.89e-10,560;UBERON:0010316,1.89e-10,560;UBERON:0005291,1.89e-10,560;UBERON:0006598,1.89e-10,560;UBERON:0010317,1.89e-10,560;UBERON:0002532,1.89e-10,560;UBERON:0000119,2.04e-10,309;UBERON:0000200,3.37e-10,6;UBERON:0005423,2.30e-09,581;UBERON:0001894,2.33e-09,7;UBERON:0006222,2.33e-09,7;UBERON:0002298,3.35e-09,6;UBERON:0002021,6.27e-09,5;UBERON:0001872,9.08e-09,5;UBERON:0000349,1.55e-08,5;UBERON:0002680,6.53e-08,9;UBERON:0001895,6.53e-08,9;UBERON:0010092,6.53e-08,9;UBERON:0000369,5.31e-07,4;UBERON:0002435,5.31e-07,4;UBERON:0000204,5.31e-07,4;UBERON:0010082,5.31e-07,4 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,4.67860020691794,0,0.940364164434263,46.6564659023622,12.1818238314867,19.2080238580048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.527008714158756,103.800917331937,0,0.370784442784429,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28241220751285,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31750041646231,2.25300606146525,2.90484857173796,13.5795982070135,1.26160425437814,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0,0,0,0,0,0,1.44331342025273,2.20267769452646,1.29149563659404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,6.84289784090821,0,0,0,0,0,0,3.10252117818667,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0.602878754119172,0.871533458600294,0,0,0,0,0,0,0,1.01346914667305,2.05476322550383,1.25342674267927,0,0,0,0,154.489531527258,540.08039350913,443.094489721619,853.160339347838,359.797455932384,0,0,0,0,0,0,0,0,0,0,0,0,13.4514992680256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,2.95213181129735,0,0.103041011647722,3.29650073346036,3.96045599618822,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0.50578890427775,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0.578775534266688,0,5.68149055495571,0,0.281695602532241,0.143411352204052,0.687743287091848,2.85336841185,0,0,0,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,892.744587694136,291.889039051814,0,0,4.01138275443188,63.7593562403423,7.45966571934099,0,0,0,0,0,0,0,3.15658898038188,0,0,706.643571903414,779.901401246684,1299.48582498777,0,0.524759999977174,0,0,0,0,85.4963565638832,6.9985107211981,78.1312477199815,199.291811808114,290.034434894106,587.43968482077,447.624844201597,481.742618894282,528.718807141074,0,0,0.153900517007594,0.569710279235006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,5.97157158647103,8.84575645033392,29.329446956814,0,0,0,101.236501736977,0.802577647298789,253.005601383366,0,0,0,0.394584402849391,10.8891644443797,1018.30407794464,13.0164354034685,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.26085721434945,0,77.9633555692837,0.274083849293502,0,841.717032233407,0.195551382734803,3.44682927081595,1.06726497369676,0,0,0,0.343189995723929,0,0.124252535565433,0,3.80531777006119,5.54395085455366,0,0,115.28069543228,42.4406674565178,0,0,0,1.95497680890578,21.5410798570983,0.717873024576814,0.599037001496973,0,0.446342914883745,2.01550417460179,0,1.16495949527454,0,0,0.0674035438541849,0,0,411.13374963141,197.222532049561,2.25054407851027,3.02586760513914,1.66176135211674,1.349843349309,2.32140586367385,880.564823758068,0,0.0788057072991982,0.83927341015997,0,10.7572403599707,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,213.704726865643,167.14200860276,0,0,0.533937062838473,0.628817220398664,0.414239055347196,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,823.15733918933,774.50070333276,388.09188519015,75.1166046353993,115.5880717014,234.227631894898,1.38348634936231,0,0,0,0,75.8702547407148,39.9982038965877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,4.00027764663154,0,0,2.52369796457302,0,0,0,0,0,0,0.537266523244462,0,0,0,0,0,0,0,0,322.971706850443,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,184.423683419866,234.734614410576,0,194.720784896361,0,0,0.495743057036009,0,0,0,156.911866663952,0,0,594.184561367347,532.779126984199,216.144245163383,890.820369897599,1039.79574691459,868.130990183327,607.309903221392,32.8369666596055,0,0,0,0,0,2.0710797781803,7.55881644041844,0.225630985047772,0,0,0,0,0,821.459641713534,565.500543396426,401.179072008798,758.326258298738,709.973302105649,0,3.96968942711435,0,0,2.67850917939143,6.38939072215766,34.597039441488,43.9388029308004,0,0,0,499.713476845667,789.602146622003,0,0,1.72684804271131,427.354404571525,0,97.707983094516,0,0,25.5171262710663,0.158013611732727,0,0.173858272302579,0,5.18040410407592,0.85359238546975,1.38251932362818,0,0,0.0852134047591577,4.23387050190929,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,34.1551616654674,0,6.65952508354384,0,0.549702583727146,19.4742068201009,5.24784275134024,18.7961222033403,0,0.735444965261716,0.235676547101626,94.6206811494036,75.4497856830799,214.286453884784,0,0,0.58012099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| ||
|short_description=p1@RTN1 | |short_description=p1@RTN1 | ||
}} | }} |
Latest revision as of 19:53, 24 September 2015
Short description: | p1@RTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RTN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000395090, ENST00000557422_5end |
EntrezGene: | RTN1 |
HGNC: | 10467 |
UniProt: | A8MT72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.88e-11 | 8 |
neural cell | 1.36e-10 | 25 |
neuron | 3.65e-08 | 6 |
neuroblast | 3.65e-08 | 6 |
electrically signaling cell | 3.65e-08 | 6 |