FFCP PHASE1:Hg19::chr1:160111383..160111418,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:160111383..160111418,+ | |||
|coexpression_cluster_id=C3889 | |||
|description=CAGE_peak_at_chr1:160111383..160111418,+ | |description=CAGE_peak_at_chr1:160111383..160111418,+ | ||
|id=chr1:160111383..160111418,+ | |id=chr1:160111383..160111418,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.37e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.08e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.06e-18;82!UBERON:0006215;2.12e-12;3!UBERON:0006241;5.70e-12;3!UBERON:0003057;5.70e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.06e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.73e-85!115;UBERON:0001049!4.79e-60!57;UBERON:0005068!4.79e-60!57;UBERON:0006241!4.79e-60!57;UBERON:0007135!4.79e-60!57;UBERON:0005743!5.17e-52!86;UBERON:0002616!3.22e-51!59;UBERON:0001017!1.32e-50!82;UBERON:0003075!1.06e-49!86;UBERON:0007284!1.06e-49!86;UBERON:0000955!5.18e-49!69;UBERON:0006238!5.18e-49!69;UBERON:0002346!7.64e-47!90;UBERON:0000073!9.79e-46!94;UBERON:0001016!9.79e-46!94;UBERON:0002780!4.87e-40!41;UBERON:0001890!4.87e-40!41;UBERON:0006240!4.87e-40!41;UBERON:0003080!6.99e-39!42;UBERON:0002020!5.72e-37!34;UBERON:0003528!5.72e-37!34;UBERON:0001893!6.38e-37!34;UBERON:0002791!4.26e-35!33;UBERON:0001869!2.01e-33!32;UBERON:0000153!1.36e-32!129;UBERON:0007811!1.36e-32!129;UBERON:0000033!7.18e-32!123;UBERON:0003056!1.91e-31!61;UBERON:0002619!1.15e-27!22;UBERON:0004121!9.33e-25!169;UBERON:0001950!6.44e-24!20;UBERON:0000924!7.82e-24!173;UBERON:0006601!7.82e-24!173;UBERON:0000956!7.86e-24!25;UBERON:0000203!7.86e-24!25;UBERON:0003076!3.35e-22!15;UBERON:0003057!3.35e-22!15;UBERON:0004733!1.58e-16!12;UBERON:0002028!1.58e-16!12;UBERON:0007277!1.58e-16!12;UBERON:0004732!4.55e-15!13;UBERON:0002308!4.83e-15!9;UBERON:0000125!4.83e-15!9;UBERON:0000025!6.60e-15!194;UBERON:0000200!8.52e-14!6;UBERON:0004111!7.72e-13!241;UBERON:0002298!9.01e-13!8;UBERON:0002420!9.42e-12!9;UBERON:0007245!9.42e-12!9;UBERON:0010009!9.42e-12!9;UBERON:0010011!9.42e-12!9;UBERON:0000454!9.42e-12!9;UBERON:0009663!2.50e-11!7;UBERON:0000483!2.61e-11!309;UBERON:0000475!3.16e-11!365;UBERON:0002680!3.34e-11!9;UBERON:0001895!3.34e-11!9;UBERON:0010092!3.34e-11!9;UBERON:0000119!4.75e-11!312;UBERON:0000477!6.01e-11!286;UBERON:0000369!1.47e-09!4;UBERON:0002435!1.47e-09!4;UBERON:0000204!1.47e-09!4;UBERON:0010082!1.47e-09!4;UBERON:0000064!1.89e-09!219;UBERON:0000062!1.04e-08!511;UBERON:0000481!1.18e-08!347;UBERON:0002771!6.06e-08!3;UBERON:0000349!8.75e-08!5;UBERON:0000468!8.78e-08!659;UBERON:0001872!1.46e-07!5;UBERON:0005383!1.53e-07!3;UBERON:0005382!1.53e-07!3;UBERON:0002240!1.63e-07!3;UBERON:0001871!2.14e-07!7;UBERON:0000988!2.40e-07!3;UBERON:0000922!2.42e-07!612;UBERON:0006331!2.61e-07!3;UBERON:0001896!3.16e-07!3;UBERON:0005290!3.16e-07!3;UBERON:0010096!3.16e-07!3;UBERON:0002021!5.98e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.35e-44;34!UBERON:0002020;1.35e-44;34!UBERON:0001893;1.64e-44;34!UBERON:0000073;2.24e-41;53!UBERON:0002616;2.24e-41;53!UBERON:0001869;3.30e-40;32!UBERON:0002791;3.54e-40;32!UBERON:0002619;2.22e-39;22!UBERON:0002780;2.57e-35;41!UBERON:0001890;2.57e-35;41!UBERON:0000956;2.26e-34;25!UBERON:0000203;2.26e-34;25!UBERON:0001950;4.62e-33;20!UBERON:0001017;1.07e-28;75!UBERON:0000955;1.84e-27;68!UBERON:0001016;2.17e-23;83!UBERON:0000200;1.05e-22;6!UBERON:0000125;1.17e-19;9!UBERON:0002308;1.17e-19;9!UBERON:0004733;6.64e-19;12!UBERON:0002028;6.64e-19;12!UBERON:0007023;1.82e-17;114!UBERON:0004732;2.39e-17;13!UBERON:0002298;2.86e-15;6!UBERON:0002420;4.46e-15;9!UBERON:0007245;4.46e-15;9!UBERON:0010009;4.46e-15;9!UBERON:0010011;4.46e-15;9!UBERON:0000454;4.46e-15;9!UBERON:0002680;1.87e-14;9!UBERON:0001895;1.87e-14;9!UBERON:0009663;1.32e-13;7!UBERON:0000349;7.66e-13;5!UBERON:0001870;1.89e-12;3!UBERON:0001872;2.26e-12;5!UBERON:0002240;5.70e-12;3!UBERON:0005174;5.70e-12;3!UBERON:0001137;5.70e-12;3!UBERON:0000988;2.43e-11;3!UBERON:0011216;5.55e-10;132!UBERON:0001871;1.45e-09;6!UBERON:0000369;1.92e-09;4!UBERON:0002435;1.92e-09;4!UBERON:0000204;1.92e-09;4!UBERON:0002771;4.02e-09;2!UBERON:0002702;6.44e-09;2!UBERON:0001954;1.05e-08;2!UBERON:0003022;1.05e-08;2!UBERON:0002421;1.05e-08;2!UBERON:0002600;1.05e-08;2!UBERON:0002148;4.06e-08;2!UBERON:0006331;4.06e-08;2!UBERON:0009662;4.06e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.46e-78,56;UBERON:0005068,1.46e-78,56;UBERON:0006241,1.46e-78,56;UBERON:0007135,1.46e-78,56;UBERON:0000073,2.70e-69,53;UBERON:0002616,2.70e-69,53;UBERON:0007023,4.80e-67,114;UBERON:0001017,5.60e-65,81;UBERON:0000955,1.02e-62,68;UBERON:0006238,1.02e-62,68;UBERON:0001016,1.05e-57,89;UBERON:0003075,2.30e-57,82;UBERON:0007284,2.30e-57,82;UBERON:0002346,2.60e-54,86;UBERON:0003528,1.62e-52,34;UBERON:0002020,1.62e-52,34;UBERON:0001893,1.93e-52,34;UBERON:0002780,8.05e-51,41;UBERON:0001890,8.05e-51,41;UBERON:0003080,8.05e-51,41;UBERON:0006240,8.05e-51,41;UBERON:0001869,1.40e-46,32;UBERON:0002791,1.61e-46,32;UBERON:0010371,1.91e-43,104;UBERON:0002619,2.43e-39,22;UBERON:0010314,7.29e-39,132;UBERON:0003056,4.22e-35,61;UBERON:0000956,2.45e-34,25;UBERON:0000203,2.45e-34,25;UBERON:0001950,4.79e-33,20;UBERON:0004121,8.34e-33,171;UBERON:0000924,8.34e-33,171;UBERON:0006601,8.34e-33,171;UBERON:0003076,2.01e-28,15;UBERON:0003057,2.01e-28,15;UBERON:0000200,5.14e-23,6;UBERON:0011216,1.10e-21,223;UBERON:0000125,6.18e-20,9;UBERON:0002308,6.18e-20,9;UBERON:0004733,4.20e-19,12;UBERON:0002028,4.20e-19,12;UBERON:0007277,4.20e-19,12;UBERON:0000025,2.85e-18,192;UBERON:0004732,1.57e-17,13;UBERON:0004111,5.35e-16,240;UBERON:0002298,1.71e-15,6;UBERON:0002420,3.91e-15,9;UBERON:0007245,3.91e-15,9;UBERON:0010009,3.91e-15,9;UBERON:0010011,3.91e-15,9;UBERON:0000454,3.91e-15,9;UBERON:0002680,1.02e-14,9;UBERON:0001895,1.02e-14,9;UBERON:0010092,1.02e-14,9;UBERON:0009663,1.06e-13,7;UBERON:0000349,8.82e-13,5;UBERON:0001872,2.17e-12,5;UBERON:0001870,2.21e-12,3;UBERON:0002240,5.31e-12,3;UBERON:0005174,5.31e-12,3;UBERON:0001137,5.31e-12,3;UBERON:0000988,1.04e-11,3;UBERON:0000483,1.31e-10,306;UBERON:0000119,2.03e-10,309;UBERON:0000369,1.49e-09,4;UBERON:0002435,1.49e-09,4;UBERON:0000204,1.49e-09,4;UBERON:0010082,1.49e-09,4;UBERON:0001871,1.57e-09,6;UBERON:0002771,3.51e-09,2;UBERON:0002702,5.86e-09,2;UBERON:0001954,1.13e-08,2;UBERON:0003022,1.13e-08,2;UBERON:0002421,1.13e-08,2;UBERON:0002600,1.13e-08,2;UBERON:0002148,2.42e-08,2;UBERON:0006331,2.42e-08,2;UBERON:0009662,2.42e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,3.0882908142977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,4.07941307590487,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,4.84666373047609,4.17456441728331,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,3.85908603601305,1.52581736317083,4.86548743697388,3.84211904639612,2.19385397153973,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41542379259422,0.802577647298789,1.87411556580271,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,2.02594547058812,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,2.0535806833799,0,0,0,1.11712960508902,0,0,1.19807400299395,1.28767814440971,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,4.22230558945884,0,0,0,0,0,1.70098758642469,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,1.93924434542326,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,8.78589107294135,2.754200475543,0.573409195690071,2.44043913381075,2.11127770000704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56916900385838,0,3.03304332208587,0.615349092722265,0.252071696221718,1.72893131160545,4.68279372332368,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,1.95858995393344,4.68646859168308,2.48024155801421,1.58539525484767,0,0,2.97726707033577,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,1.90315252335129,1.71009211263408,0,0,0.39246546425257,2.98519620840404,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,4.53200186031526,1.33461648913121,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.490296643507811,0,2.35570160537934,2.97046400327086,1.6906229103336,0,0,0,0,0,0,0,0,0,1.72007499781742,0,4.01149792126397,0.436350690340377,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.454672189309436,0,0.829169439458779,1.86179392551411,1.0661699095049,0.23806443146374,0,0,0,0,0.202117188958219,2.61260097476354,1.71116650542641,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17480694477644,3.0882908142977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,4.07941307590487,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,0,0,4.84666373047609,4.17456441728331,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,3.85908603601305,1.52581736317083,4.86548743697388,3.84211904639612,2.19385397153973,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41542379259422,0.802577647298789,1.87411556580271,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,2.02594547058812,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,2.0535806833799,0,0,0,1.11712960508902,0,0,1.19807400299395,1.28767814440971,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0,1.59045937961861,4.22230558945884,0,0,0,0,0,1.70098758642469,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,1.93924434542326,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,8.78589107294135,2.754200475543,0.573409195690071,2.44043913381075,2.11127770000704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90342715918635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56916900385838,0,3.03304332208587,0.615349092722265,0.252071696221718,1.72893131160545,4.68279372332368,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,1.95858995393344,4.68646859168308,2.48024155801421,1.58539525484767,0,0,2.97726707033577,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,1.90315252335129,1.71009211263408,0,0,0.39246546425257,2.98519620840404,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,4.53200186031526,1.33461648913121,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0.490296643507811,0,2.35570160537934,2.97046400327086,1.6906229103336,0,0,0,0,0,0,0,0,0,1.72007499781742,0,4.01149792126397,0.436350690340377,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.454672189309436,0,0.829169439458779,1.86179392551411,1.0661699095049,0.23806443146374,0,0,0,0,0.202117188958219,2.61260097476354,1.71116650542641,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr1:160111383..160111418,+ | |short_description=p@chr1:160111383..160111418,+ | ||
}} | }} |
Latest revision as of 23:15, 27 July 2015
Short description: | p@chr1:160111383..160111418, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160111383..160111418, + |
Coexpression cluster: | C3889_medial_hippocampus_cerebellum_brain_parietal_olfactory_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.04e-08 | 2 |