FFCP PHASE1:Hg19::chr22:31003229..31003252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6948 | |EntrezGene=6948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11653 | |HGNC=11653 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FD4 | |UniProt=Q96FD4 | ||
|association_with_transcript=38bp_to_ENST00000407817_5end | |association_with_transcript=38bp_to_ENST00000407817_5end | ||
|cluster_id=chr22:31003229..31003252,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_4_at_TCN2_5end | |description=CAGE_peak_4_at_TCN2_5end | ||
|id=chr22:31003229..31003252,+ | |id=chr22:31003229..31003252,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.62e-22!35;CL:0002078!1.19e-16!44;CL:0002139!7.72e-16!24;CL:0000071!2.19e-12!18;CL:0002546!2.19e-12!18;CL:0002057!2.52e-12!42;CL:0000213!1.29e-10!57;CL:0000215!1.29e-10!57;CL:0002194!2.64e-10!63;CL:0000576!2.64e-10!63;CL:0000040!2.64e-10!63;CL:0000559!2.64e-10!63;CL:0000860!2.97e-10!45;CL:0000839!1.65e-09!70;CL:0002009!2.46e-09!65;CL:0000557!4.53e-09!71;CL:0000766!3.21e-08!76;CL:1000497!5.77e-08!18;CL:0002518!5.77e-08!18;CL:1000413!3.57e-07!9;CL:1000449!8.36e-07!16 | |ontology_enrichment_celltype=CL:0000115!3.62e-22!35;CL:0002078!1.19e-16!44;CL:0002139!7.72e-16!24;CL:0000071!2.19e-12!18;CL:0002546!2.19e-12!18;CL:0002057!2.52e-12!42;CL:0000213!1.29e-10!57;CL:0000215!1.29e-10!57;CL:0002194!2.64e-10!63;CL:0000576!2.64e-10!63;CL:0000040!2.64e-10!63;CL:0000559!2.64e-10!63;CL:0000860!2.97e-10!45;CL:0000839!1.65e-09!70;CL:0002009!2.46e-09!65;CL:0000557!4.53e-09!71;CL:0000766!3.21e-08!76;CL:1000497!5.77e-08!18;CL:0002518!5.77e-08!18;CL:1000413!3.57e-07!9;CL:1000449!8.36e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.73e-29;36!CL:0002139;1.32e-23;24!CL:0000071;2.55e-18;18!CL:0002078;1.92e-17;45!CL:0000473;4.54e-13;39!CL:0000234;4.54e-13;39!CL:0000860;1.54e-12;33!CL:0002057;1.54e-12;33!CL:1000497;9.88e-12;17!CL:0002518;9.88e-12;17!CL:0000213;4.65e-11;58!CL:0000215;4.65e-11;58!CL:0000576;2.10e-10;48!CL:1000413;3.34e-10;9!CL:1000449;6.36e-10;15!CL:0002681;3.33e-08;12!CL:0002584;3.33e-08;12!CL:0002544;1.80e-07;6!CL:1000746;2.15e-07;7!CL:1000612;2.15e-07;7!CL:0002543;2.22e-07;6!CL:0002138;7.76e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.52e-34,36;CL:0002078,2.44e-27,45;CL:0002139,1.10e-23,24;CL:0000071,2.51e-18,18;CL:0002546,2.51e-18,18;CL:0000213,7.72e-18,58;CL:0000215,7.72e-18,58;CL:0000473,2.59e-16,48;CL:0000234,2.59e-16,48;CL:0002194,3.38e-14,59;CL:0000576,3.38e-14,59;CL:0000040,3.38e-14,59;CL:0000559,3.38e-14,59;CL:0000860,1.87e-13,42;CL:0002057,1.87e-13,42;CL:0002009,2.51e-13,61;CL:0000839,4.39e-12,66;CL:0000557,1.01e-11,67;CL:1000497,1.07e-11,17;CL:0002518,1.07e-11,17;CL:0000766,9.23e-11,72;CL:1000413,2.91e-10,9;CL:1000449,7.02e-10,15;CL:0000222,3.34e-08,121;CL:0002681,3.36e-08,12;CL:0002584,3.36e-08,12;CL:0002544,1.70e-07,6;CL:1000746,1.71e-07,7;CL:1000612,1.71e-07,7;CL:0002543,2.28e-07,6;CL:0005020,6.56e-07,6;CL:0002138,6.56e-07,6;CL:0005022,6.56e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.55e-18;18!CL:0002057;5.01e-10;42!CL:0005022;7.76e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.99e-18!659;UBERON:0000480!8.41e-18!626;UBERON:0000467!8.77e-18!625;UBERON:0003081!9.81e-16!216;UBERON:0000922!1.46e-15!612;UBERON:0002050!3.67e-14!605;UBERON:0005423!3.67e-14!605;UBERON:0000923!4.45e-14!604;UBERON:0005291!4.45e-14!604;UBERON:0006598!4.45e-14!604;UBERON:0002532!4.45e-14!604;UBERON:0002049!1.55e-13!79;UBERON:0007798!1.55e-13!79;UBERON:0000062!8.92e-13!511;UBERON:0001986!2.19e-12!18;UBERON:0004638!2.19e-12!18;UBERON:0004852!2.19e-12!18;UBERON:0002405!4.97e-12!115;UBERON:0000025!1.17e-11!194;UBERON:0001009!1.38e-11!113;UBERON:0000477!2.93e-11!286;UBERON:0003914!4.03e-11!118;UBERON:0004111!4.58e-11!241;UBERON:0000119!5.06e-11!312;UBERON:0004535!1.48e-10!110;UBERON:0000483!3.83e-10!309;UBERON:0000926!1.78e-09!448;UBERON:0004120!1.78e-09!448;UBERON:0006603!1.78e-09!448;UBERON:0000055!1.98e-09!69;UBERON:0007023!3.89e-09!115;UBERON:0000487!1.14e-08!22;UBERON:0004872!4.76e-08!84;UBERON:0002193!7.39e-08!112;UBERON:0002371!1.50e-07!80;UBERON:0006914!1.50e-07!25;UBERON:0006555!3.00e-07!17;UBERON:0005103!3.00e-07!17;UBERON:0000083!3.00e-07!17;UBERON:0009201!3.00e-07!17;UBERON:0004819!3.00e-07!17;UBERON:0006553!3.00e-07!17;UBERON:0003074!3.00e-07!17;UBERON:0003060!3.00e-07!17;UBERON:0003887!3.06e-07!21;UBERON:0003915!3.57e-07!9;UBERON:0004700!3.57e-07!9;UBERON:0001917!3.57e-07!9;UBERON:0000080!4.31e-07!18;UBERON:0002120!4.31e-07!18;UBERON:0004875!4.31e-07!18;UBERON:0005721!4.31e-07!18;UBERON:0005754!4.31e-07!18;UBERON:0007297!4.31e-07!18;UBERON:0003103!6.14e-07!69;UBERON:0004211!8.36e-07!16;UBERON:0001285!8.36e-07!16;UBERON:0007684!8.36e-07!16;UBERON:0003220!8.36e-07!16;UBERON:0004208!8.36e-07!16;UBERON:0004876!9.24e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.55e-18;18!UBERON:0001986;2.55e-18;18!UBERON:0004852;2.55e-18;18!UBERON:0000487;1.10e-13;22!UBERON:0006914;3.15e-11;25!UBERON:0000490;3.65e-11;33!UBERON:0003915;3.34e-10;9!UBERON:0004700;3.34e-10;9!UBERON:0001917;3.34e-10;9!UBERON:0006555;6.36e-10;15!UBERON:0004819;6.36e-10;15!UBERON:0001285;6.36e-10;15!UBERON:0007684;6.36e-10;15!UBERON:0002113;1.13e-09;24!UBERON:0011143;1.13e-09;24!UBERON:0000353;3.34e-09;15!UBERON:0001225;3.33e-08;12!UBERON:0008987;3.33e-08;12!UBERON:0006876;9.26e-08;11!UBERON:0000074;2.15e-07;7!UBERON:0001229;2.15e-07;7!UBERON:0000489;4.81e-07;29!UBERON:0002049;6.06e-07;75!UBERON:0007798;6.06e-07;75 | |||
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| ||
|short_description=p4@TCN2 | |short_description=p4@TCN2 | ||
}} | }} |
Latest revision as of 18:41, 19 September 2015
Short description: | p4@TCN2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TCN2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 38bp_to_ENST00000407817_5end |
EntrezGene: | TCN2 |
HGNC: | 11653 |
UniProt: | Q96FD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data