FFCP PHASE1:Hg19::chr19:4559675..4559715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10501 | |EntrezGene=10501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10739 | |HGNC=10739 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3T3 | |UniProt=Q9H3T3 | ||
|association_with_transcript=55bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | |association_with_transcript=55bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | ||
|cluster_id=chr19:4559675..4559715,- | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_2_at_SEMA6B_5end | |description=CAGE_peak_2_at_SEMA6B_5end | ||
|id=chr19:4559675..4559715,- | |id=chr19:4559675..4559715,- | ||
|ontology_enrichment_celltype=CL:0000766!1.03e-26!76;CL:0002057!4.64e-26!42;CL:0000115!1.90e-24!35;CL:0002194!9.92e-24!63;CL:0000576!9.92e-24!63;CL:0000040!9.92e-24!63;CL:0000559!9.92e-24!63;CL:0002009!2.16e-23!65;CL:0000860!3.25e-23!45;CL:0002139!1.59e-21!24;CL:0000557!1.53e-20!71;CL:0000839!3.31e-20!70;CL:0002078!1.92e-17!44;CL:0000763!3.76e-17!112;CL:0000049!3.76e-17!112;CL:0000071!1.69e-16!18;CL:0002546!1.69e-16!18;CL:0000213!9.40e-12!57;CL:0000215!9.40e-12!57;CL:0000738!2.67e-10!140;CL:1000413!2.19e-09!9;CL:0002087!6.53e-08!119;CL:0000094!3.01e-07!8;CL:0000037!3.13e-07!172;CL:0000566!3.13e-07!172;CL:0002032!7.00e-07!165;CL:0000837!7.00e-07!165 | |ontology_enrichment_celltype=CL:0000766!1.03e-26!76;CL:0002057!4.64e-26!42;CL:0000115!1.90e-24!35;CL:0002194!9.92e-24!63;CL:0000576!9.92e-24!63;CL:0000040!9.92e-24!63;CL:0000559!9.92e-24!63;CL:0002009!2.16e-23!65;CL:0000860!3.25e-23!45;CL:0002139!1.59e-21!24;CL:0000557!1.53e-20!71;CL:0000839!3.31e-20!70;CL:0002078!1.92e-17!44;CL:0000763!3.76e-17!112;CL:0000049!3.76e-17!112;CL:0000071!1.69e-16!18;CL:0002546!1.69e-16!18;CL:0000213!9.40e-12!57;CL:0000215!9.40e-12!57;CL:0000738!2.67e-10!140;CL:1000413!2.19e-09!9;CL:0002087!6.53e-08!119;CL:0000094!3.01e-07!8;CL:0000037!3.13e-07!172;CL:0000566!3.13e-07!172;CL:0002032!7.00e-07!165;CL:0000837!7.00e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-29;33!CL:0002057;2.63e-29;33!CL:0000115;5.53e-27;36!CL:0002139;2.50e-26;24!CL:0000473;4.04e-26;39!CL:0000234;4.04e-26;39!CL:0000071;4.37e-20;18!CL:0000576;2.13e-18;48!CL:0002078;6.51e-15;45!CL:0000766;8.15e-14;69!CL:1000413;2.93e-11;9!CL:0000213;2.32e-09;58!CL:0000215;2.32e-09;58!CL:0000094;1.40e-08;8!CL:0002544;5.95e-08;6!CL:0002138;8.68e-08;6!CL:0002543;1.76e-07;6!CL:0000763;5.00e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.50e-31,36;CL:0000473,1.45e-30,48;CL:0000234,1.45e-30,48;CL:0000766,4.88e-29,72;CL:0000860,9.92e-28,42;CL:0002057,9.92e-28,42;CL:0002139,2.48e-26,24;CL:0002194,8.72e-26,59;CL:0000576,8.72e-26,59;CL:0000040,8.72e-26,59;CL:0000559,8.72e-26,59;CL:0002009,1.93e-24,61;CL:0002078,1.28e-22,45;CL:0000839,1.89e-21,66;CL:0000557,6.57e-21,67;CL:0000071,4.33e-20,18;CL:0002546,4.33e-20,18;CL:0000763,4.10e-15,108;CL:0000049,4.10e-15,108;CL:0000213,8.00e-15,58;CL:0000215,8.00e-15,58;CL:1000413,2.89e-11,9;CL:0000738,3.32e-09,136;CL:0000094,1.28e-08,8;CL:0002087,4.42e-08,115;CL:0002544,5.89e-08,6;CL:0005020,8.71e-08,6;CL:0002138,8.71e-08,6;CL:0005022,8.71e-08,6;CL:0002543,1.77e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.61e-21;42!CL:0002546;4.37e-20;18!CL:0005022;8.68e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-34!115;UBERON:0001049!1.36e-17!57;UBERON:0005068!1.36e-17!57;UBERON:0006241!1.36e-17!57;UBERON:0007135!1.36e-17!57;UBERON:0002405!1.81e-17!115;UBERON:0002193!3.49e-17!112;UBERON:0003081!1.12e-16!216;UBERON:0001986!1.69e-16!18;UBERON:0004638!1.69e-16!18;UBERON:0004852!1.69e-16!18;UBERON:0002371!4.08e-16!80;UBERON:0002616!5.77e-15!59;UBERON:0003080!1.94e-14!42;UBERON:0002780!5.64e-14!41;UBERON:0001890!5.64e-14!41;UBERON:0006240!5.64e-14!41;UBERON:0001474!9.52e-14!86;UBERON:0002390!1.16e-13!102;UBERON:0003061!1.16e-13!102;UBERON:0002020!1.15e-12!34;UBERON:0003528!1.15e-12!34;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0000025!2.85e-12!194;UBERON:0001017!2.95e-12!82;UBERON:0000487!4.17e-12!22;UBERON:0001893!4.22e-12!34;UBERON:0002791!9.01e-12!33;UBERON:0005743!1.38e-11!86;UBERON:0001869!3.62e-11!32;UBERON:0006914!1.18e-10!25;UBERON:0003075!1.27e-10!86;UBERON:0007284!1.27e-10!86;UBERON:0004111!1.45e-10!241;UBERON:0002619!7.97e-10!22;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101;UBERON:0000073!1.20e-09!94;UBERON:0001016!1.20e-09!94;UBERON:0002346!1.71e-09!90;UBERON:0003915!2.19e-09!9;UBERON:0004700!2.19e-09!9;UBERON:0001917!2.19e-09!9;UBERON:0001950!8.29e-09!20;UBERON:0000467!1.19e-08!625;UBERON:0000477!1.37e-08!286;UBERON:0000480!1.51e-08!626;UBERON:0000956!5.95e-08!25;UBERON:0000203!5.95e-08!25;UBERON:0000468!2.94e-07!659;UBERON:0003056!3.11e-07!61;UBERON:0000055!5.90e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!2.22e-34!115;UBERON:0001049!1.36e-17!57;UBERON:0005068!1.36e-17!57;UBERON:0006241!1.36e-17!57;UBERON:0007135!1.36e-17!57;UBERON:0002405!1.81e-17!115;UBERON:0002193!3.49e-17!112;UBERON:0003081!1.12e-16!216;UBERON:0001986!1.69e-16!18;UBERON:0004638!1.69e-16!18;UBERON:0004852!1.69e-16!18;UBERON:0002371!4.08e-16!80;UBERON:0002616!5.77e-15!59;UBERON:0003080!1.94e-14!42;UBERON:0002780!5.64e-14!41;UBERON:0001890!5.64e-14!41;UBERON:0006240!5.64e-14!41;UBERON:0001474!9.52e-14!86;UBERON:0002390!1.16e-13!102;UBERON:0003061!1.16e-13!102;UBERON:0002020!1.15e-12!34;UBERON:0003528!1.15e-12!34;UBERON:0000955!1.77e-12!69;UBERON:0006238!1.77e-12!69;UBERON:0000025!2.85e-12!194;UBERON:0001017!2.95e-12!82;UBERON:0000487!4.17e-12!22;UBERON:0001893!4.22e-12!34;UBERON:0002791!9.01e-12!33;UBERON:0005743!1.38e-11!86;UBERON:0001869!3.62e-11!32;UBERON:0006914!1.18e-10!25;UBERON:0003075!1.27e-10!86;UBERON:0007284!1.27e-10!86;UBERON:0004111!1.45e-10!241;UBERON:0002619!7.97e-10!22;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101;UBERON:0000073!1.20e-09!94;UBERON:0001016!1.20e-09!94;UBERON:0002346!1.71e-09!90;UBERON:0003915!2.19e-09!9;UBERON:0004700!2.19e-09!9;UBERON:0001917!2.19e-09!9;UBERON:0001950!8.29e-09!20;UBERON:0000467!1.19e-08!625;UBERON:0000477!1.37e-08!286;UBERON:0000480!1.51e-08!626;UBERON:0000956!5.95e-08!25;UBERON:0000203!5.95e-08!25;UBERON:0000468!2.94e-07!659;UBERON:0003056!3.11e-07!61;UBERON:0000055!5.90e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.37e-20;18!UBERON:0001986;4.37e-20;18!UBERON:0004852;4.37e-20;18!UBERON:0000487;3.34e-15;22!UBERON:0006914;1.33e-12;25!UBERON:0003915;2.93e-11;9!UBERON:0004700;2.93e-11;9!UBERON:0001917;2.93e-11;9!UBERON:0000490;1.37e-07;33!UBERON:0007023;9.25e-07;114 | |||
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| ||
|short_description=p2@SEMA6B | |short_description=p2@SEMA6B | ||
}} | }} |
Latest revision as of 15:58, 18 September 2015
Short description: | p2@SEMA6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEMA6B_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 55bp_to_NM_032108, uc010dud.2, uc010xih.1_5end |
EntrezGene: | SEMA6B |
HGNC: | 10739 |
UniProt: | Q9H3T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.50e-31 | 36 |
defensive cell | 1.45e-30 | 48 |
phagocyte | 1.45e-30 | 48 |
myeloid leukocyte | 4.88e-29 | 72 |
classical monocyte | 9.92e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.92e-28 | 42 |
endothelial cell of vascular tree | 2.48e-26 | 24 |
monopoietic cell | 8.72e-26 | 59 |
monocyte | 8.72e-26 | 59 |
monoblast | 8.72e-26 | 59 |
promonocyte | 8.72e-26 | 59 |
macrophage dendritic cell progenitor | 1.93e-24 | 61 |
meso-epithelial cell | 1.28e-22 | 45 |
myeloid lineage restricted progenitor cell | 1.89e-21 | 66 |
granulocyte monocyte progenitor cell | 6.57e-21 | 67 |
blood vessel endothelial cell | 4.33e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.33e-20 | 18 |
myeloid cell | 4.10e-15 | 108 |
common myeloid progenitor | 4.10e-15 | 108 |
lining cell | 8.00e-15 | 58 |
barrier cell | 8.00e-15 | 58 |
endothelial cell of artery | 2.89e-11 | 9 |
leukocyte | 3.32e-09 | 136 |
granulocyte | 1.28e-08 | 8 |
nongranular leukocyte | 4.42e-08 | 115 |
aortic endothelial cell | 5.89e-08 | 6 |
lymphangioblast | 8.71e-08 | 6 |
endothelial cell of lymphatic vessel | 8.71e-08 | 6 |
vascular lymphangioblast | 8.71e-08 | 6 |
vein endothelial cell | 1.77e-07 | 6 |