FFCP PHASE1:Hg19::chr19:50831985..50832036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3748 | |EntrezGene=3748 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6235 | |HGNC=6235 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=302bp_to_BC156302_5end | |association_with_transcript=302bp_to_BC156302_5end | ||
|cluster_id=chr19:50831985..50832036,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_KCNC3_5end | |description=CAGE_peak_3_at_KCNC3_5end | ||
|id=chr19:50831985..50832036,- | |id=chr19:50831985..50832036,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000319;1.35e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.64e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.35e-21;3!UBERON:0010122;1.64e-13;2!UBERON:0006601;3.14e-13;82!UBERON:0006222;1.35e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.35e-07;1!DOID:0060061;1.35e-07;1!DOID:3030;1.35e-07;1!DOID:8691;1.35e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.26e-07,1;DOID:0060061,1.26e-07,1;DOID:8691,1.26e-07,1;DOID:3030,1.64e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.24e-34!57;UBERON:0005068!1.24e-34!57;UBERON:0006241!1.24e-34!57;UBERON:0007135!1.24e-34!57;UBERON:0002616!4.95e-33!59;UBERON:0000955!2.34e-31!69;UBERON:0006238!2.34e-31!69;UBERON:0002780!9.21e-31!41;UBERON:0001890!9.21e-31!41;UBERON:0006240!9.21e-31!41;UBERON:0003080!8.44e-30!42;UBERON:0001017!1.12e-28!82;UBERON:0001869!2.06e-28!32;UBERON:0002020!2.41e-28!34;UBERON:0003528!2.41e-28!34;UBERON:0001893!2.59e-28!34;UBERON:0005743!4.89e-28!86;UBERON:0001950!3.01e-27!20;UBERON:0002619!4.20e-27!22;UBERON:0002791!9.08e-27!33;UBERON:0003075!1.20e-26!86;UBERON:0007284!1.20e-26!86;UBERON:0002346!4.42e-26!90;UBERON:0000073!4.71e-24!94;UBERON:0001016!4.71e-24!94;UBERON:0007023!2.93e-23!115;UBERON:0000956!3.54e-23!25;UBERON:0000203!3.54e-23!25;UBERON:0003056!1.01e-21!61;UBERON:0000153!6.24e-16!129;UBERON:0007811!6.24e-16!129;UBERON:0000033!1.54e-15!123;UBERON:0000924!3.08e-10!173;UBERON:0006601!3.08e-10!173;UBERON:0004121!3.35e-10!169;UBERON:0001871!3.58e-10!7;UBERON:0001872!1.45e-09!5;UBERON:0002021!2.18e-09!5;UBERON:0000025!1.17e-08!194;UBERON:0004733!1.46e-08!12;UBERON:0002028!1.46e-08!12;UBERON:0007277!1.46e-08!12;UBERON:0000369!5.52e-08!4;UBERON:0002435!5.52e-08!4;UBERON:0000204!5.52e-08!4;UBERON:0010082!5.52e-08!4;UBERON:0004732!9.25e-08!13;UBERON:0000200!1.09e-07!6;UBERON:0002680!6.17e-07!9;UBERON:0001895!6.17e-07!9;UBERON:0010092!6.17e-07!9;UBERON:0002420!6.37e-07!9;UBERON:0007245!6.37e-07!9;UBERON:0010009!6.37e-07!9;UBERON:0010011!6.37e-07!9;UBERON:0000454!6.37e-07!9;UBERON:0002308!9.98e-07!9;UBERON:0000125!9.98e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.46e-48;32!UBERON:0001893;1.90e-47;34!UBERON:0003528;1.79e-43;34!UBERON:0002020;1.79e-43;34!UBERON:0002791;1.87e-43;32!UBERON:0001950;6.83e-43;20!UBERON:0002619;5.73e-39;22!UBERON:0000956;3.26e-34;25!UBERON:0000203;3.26e-34;25!UBERON:0000073;5.15e-32;53!UBERON:0002616;5.15e-32;53!UBERON:0002780;2.24e-31;41!UBERON:0001890;2.24e-31;41!UBERON:0000955;5.48e-27;68!UBERON:0000369;1.37e-25;4!UBERON:0002435;1.37e-25;4!UBERON:0000204;1.37e-25;4!UBERON:0001017;3.65e-25;75!UBERON:0002021;1.65e-21;5!UBERON:0001872;3.27e-21;5!UBERON:0005383;2.21e-19;3!UBERON:0005382;2.21e-19;3!UBERON:0004733;3.22e-19;12!UBERON:0002028;3.22e-19;12!UBERON:0002680;2.71e-18;9!UBERON:0001895;2.71e-18;9!UBERON:0001016;9.68e-18;83!UBERON:0004732;1.06e-17;13!UBERON:0000125;1.94e-17;9!UBERON:0002308;1.94e-17;9!UBERON:0009663;9.94e-15;7!UBERON:0007023;2.45e-14;114!UBERON:0001873;1.64e-13;2!UBERON:0002420;1.70e-11;9!UBERON:0007245;1.70e-11;9!UBERON:0010009;1.70e-11;9!UBERON:0010011;1.70e-11;9!UBERON:0000454;1.70e-11;9!UBERON:0000200;1.15e-10;6!UBERON:0002037;1.21e-10;6!UBERON:0002298;3.07e-10;6!UBERON:0000988;1.13e-09;3!UBERON:0011216;1.71e-08;132!UBERON:0002902;2.70e-08;1!UBERON:0009899;2.70e-08;1!UBERON:0002581;2.99e-08;1!UBERON:0007190;3.67e-08;1!UBERON:0001882;5.90e-08;1!UBERON:0002022;5.90e-08;1!UBERON:0005403;5.90e-08;1!UBERON:0001874;1.35e-07;1!UBERON:0003112;1.35e-07;1!UBERON:0011158;1.35e-07;1!UBERON:0003128;1.35e-07;1!UBERON:0001703;1.35e-07;1!UBERON:0002241;1.35e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.72e-65,53;UBERON:0002616,4.72e-65,53;UBERON:0001049,2.15e-61,56;UBERON:0005068,2.15e-61,56;UBERON:0006241,2.15e-61,56;UBERON:0007135,2.15e-61,56;UBERON:0000955,2.51e-58,68;UBERON:0006238,2.51e-58,68;UBERON:0001869,6.41e-54,32;UBERON:0001893,1.21e-50,34;UBERON:0003528,2.74e-50,34;UBERON:0002020,2.74e-50,34;UBERON:0001017,1.86e-48,81;UBERON:0002791,1.79e-47,32;UBERON:0002780,7.97e-47,41;UBERON:0001890,7.97e-47,41;UBERON:0003080,7.97e-47,41;UBERON:0006240,7.97e-47,41;UBERON:0001016,2.97e-43,89;UBERON:0001950,5.38e-43,20;UBERON:0003075,9.47e-41,82;UBERON:0007284,9.47e-41,82;UBERON:0002619,4.61e-39,22;UBERON:0002346,1.15e-38,86;UBERON:0007023,7.57e-37,114;UBERON:0000956,2.69e-34,25;UBERON:0000203,2.69e-34,25;UBERON:0010371,2.96e-31,104;UBERON:0003056,1.49e-30,61;UBERON:0010314,6.33e-26,132;UBERON:0000369,9.04e-26,4;UBERON:0002435,9.04e-26,4;UBERON:0000204,9.04e-26,4;UBERON:0010082,9.04e-26,4;UBERON:0002021,1.42e-21,5;UBERON:0001872,3.11e-21,5;UBERON:0004121,1.34e-20,171;UBERON:0000924,1.34e-20,171;UBERON:0006601,1.34e-20,171;UBERON:0005383,1.32e-19,3;UBERON:0005382,1.32e-19,3;UBERON:0004733,4.88e-19,12;UBERON:0002028,4.88e-19,12;UBERON:0007277,4.88e-19,12;UBERON:0002680,3.75e-18,9;UBERON:0001895,3.75e-18,9;UBERON:0010092,3.75e-18,9;UBERON:0004732,1.55e-17,13;UBERON:0000125,1.91e-17,9;UBERON:0002308,1.91e-17,9;UBERON:0011216,4.85e-16,223;UBERON:0003076,3.93e-15,15;UBERON:0003057,3.93e-15,15;UBERON:0000025,6.97e-15,192;UBERON:0009663,7.86e-15,7;UBERON:0001873,1.19e-13,2;UBERON:0010122,1.19e-13,2;UBERON:0002420,1.42e-11,9;UBERON:0007245,1.42e-11,9;UBERON:0010009,1.42e-11,9;UBERON:0010011,1.42e-11,9;UBERON:0000454,1.42e-11,9;UBERON:0004111,5.57e-11,240;UBERON:0000200,1.08e-10,6;UBERON:0002037,1.40e-10,6;UBERON:0006215,1.40e-10,6;UBERON:0002298,4.03e-10,6;UBERON:0000988,1.38e-09,3;UBERON:0002902,2.70e-08,1;UBERON:0009899,2.70e-08,1;UBERON:0002581,2.89e-08,1;UBERON:0007190,3.55e-08,1;UBERON:0002022,5.70e-08,1;UBERON:0001882,6.52e-08,1;UBERON:0005403,6.52e-08,1;UBERON:0001874,1.11e-07,1;UBERON:0000483,1.33e-07,306;UBERON:0000119,1.75e-07,309;UBERON:0003112,1.87e-07,1;UBERON:0011158,1.87e-07,1;UBERON:0003128,1.87e-07,1;UBERON:0001703,1.87e-07,1;UBERON:0002241,1.87e-07,1;UBERON:0004761,1.87e-07,1;UBERON:0009617,1.87e-07,1 | |||
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| ||
|short_description=p3@KCNC3 | |short_description=p3@KCNC3 | ||
}} | }} |
Latest revision as of 10:44, 19 September 2015
Short description: | p3@KCNC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNC3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 302bp_to_BC156302_5end |
EntrezGene: | KCNC3 |
HGNC: | 6235 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.64e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.26e-07 | 1 |
cutaneous T cell lymphoma | 1.26e-07 | 1 |
mycosis fungoides | 1.26e-07 | 1 |
mucinous adenocarcinoma | 1.64e-07 | 1 |