FFCP PHASE1:Hg19::chr13:49050561..49050578,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:49050561..49050578,+
|short_description=p8@RB1
|description=CAGE_peak_8_at_RB1_5end
|association_with_transcript=-4bp_to_ENST00000484879_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5925 | |EntrezGene=5925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9884 | |HGNC=9884 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000484879_5end | |||
|cluster_id=chr13:49050561..49050578,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_8_at_RB1_5end | |||
|id=chr13:49050561..49050578,+ | |||
|ontology_enrichment_celltype=CL:0002009!2.64e-19!65;CL:0002194!5.28e-17!63;CL:0000576!5.28e-17!63;CL:0000040!5.28e-17!63;CL:0000559!5.28e-17!63;CL:0000557!7.21e-17!71;CL:0000839!1.96e-14!70;CL:0000763!3.34e-13!112;CL:0000049!3.34e-13!112;CL:0002057!5.22e-13!42;CL:0000766!1.27e-12!76;CL:0000860!9.70e-12!45;CL:0002031!4.10e-11!124;CL:0000738!5.55e-11!140;CL:0000453!2.82e-10!5;CL:0002087!3.37e-10!119;CL:0002032!3.77e-10!165;CL:0000837!3.77e-10!165;CL:0000990!2.00e-09!8;CL:0000037!2.96e-09!172;CL:0000566!2.96e-09!172;CL:0000988!4.08e-08!182;CL:0000451!1.85e-07!10;CL:0002619!5.02e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.21e-22;5!CL:0002619;3.63e-22;3!CL:0001014;1.90e-15;2!CL:0001016;1.90e-15;2!CL:0000990;1.13e-12;8!CL:0000235;1.43e-11;6!CL:0000451;2.14e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.95e-23,5;CL:0002619,3.78e-22,3;CL:0001014,1.77e-15,2;CL:0001016,1.77e-15,2;CL:0000990,8.37e-13,8;CL:0000235,1.41e-11,6;CL:0000451,1.68e-10,10;CL:0002009,7.57e-10,61;CL:0000557,7.92e-09,67;CL:0000763,3.52e-07,108;CL:0000049,3.52e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0010115;1.81e-08;1!UBERON:0001045;3.82e-08;1!UBERON:0006222;3.82e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.53e-46!115;UBERON:0001049!2.12e-29!57;UBERON:0005068!2.12e-29!57;UBERON:0006241!2.12e-29!57;UBERON:0007135!2.12e-29!57;UBERON:0002616!3.15e-24!59;UBERON:0002780!4.69e-23!41;UBERON:0001890!4.69e-23!41;UBERON:0006240!4.69e-23!41;UBERON:0003080!2.55e-22!42;UBERON:0001893!4.12e-22!34;UBERON:0002020!6.83e-22!34;UBERON:0003528!6.83e-22!34;UBERON:0001017!6.05e-21!82;UBERON:0002791!7.27e-21!33;UBERON:0005743!1.46e-20!86;UBERON:0000955!2.44e-20!69;UBERON:0006238!2.44e-20!69;UBERON:0003075!1.52e-19!86;UBERON:0007284!1.52e-19!86;UBERON:0001869!2.68e-19!32;UBERON:0002346!3.59e-18!90;UBERON:0000073!1.54e-17!94;UBERON:0001016!1.54e-17!94;UBERON:0002619!3.89e-17!22;UBERON:0000956!1.35e-14!25;UBERON:0000203!1.35e-14!25;UBERON:0001950!2.43e-14!20;UBERON:0003056!4.89e-14!61;UBERON:0002371!6.34e-14!80;UBERON:0002390!2.42e-13!102;UBERON:0003061!2.42e-13!102;UBERON:0002193!5.58e-13!112;UBERON:0001474!2.54e-12!86;UBERON:0002405!2.64e-12!115;UBERON:0002298!8.45e-11!8;UBERON:0000153!1.51e-10!129;UBERON:0007811!1.51e-10!129;UBERON:0000062!2.14e-10!511;UBERON:0000033!4.49e-10!123;UBERON:0004765!4.82e-10!101;UBERON:0001434!4.82e-10!101;UBERON:0002308!5.07e-09!9;UBERON:0000125!5.07e-09!9;UBERON:0003076!3.36e-08!15;UBERON:0003057!3.36e-08!15;UBERON:0001871!2.91e-07!7;UBERON:0000200!5.02e-07!6;UBERON:0002420!5.76e-07!9;UBERON:0007245!5.76e-07!9;UBERON:0010009!5.76e-07!9;UBERON:0010011!5.76e-07!9;UBERON:0000454!5.76e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.36e-18;6!UBERON:0000073;5.34e-13;53!UBERON:0002616;5.34e-13;53!UBERON:0002780;5.27e-11;41!UBERON:0001890;5.27e-11;41!UBERON:0000988;4.94e-10;3!UBERON:0001896;4.94e-10;3!UBERON:0005290;4.94e-10;3!UBERON:0004733;2.86e-09;12!UBERON:0002028;2.86e-09;12!UBERON:0004732;1.45e-08;13!UBERON:0002363;1.81e-08;1!UBERON:0002336;3.82e-08;1!UBERON:0002038;3.82e-08;1!UBERON:0001154;3.82e-08;1!UBERON:0001153;3.82e-08;1!UBERON:0011215;3.82e-08;1!UBERON:0001018;3.82e-08;1!UBERON:0009854;3.82e-08;1!UBERON:0009661;3.82e-08;1!UBERON:0002950;3.82e-08;1!UBERON:0002473;3.82e-08;1!UBERON:0005340;3.82e-08;1!UBERON:0003544;3.82e-08;1!UBERON:0005970;3.82e-08;1!UBERON:0002316;3.82e-08;1!UBERON:0001020;3.82e-08;1!UBERON:0001891;3.82e-08;1!UBERON:0002437;3.82e-08;1!UBERON:0002420;2.39e-07;9!UBERON:0000125;2.39e-07;9!UBERON:0007245;2.39e-07;9!UBERON:0002308;2.39e-07;9!UBERON:0010009;2.39e-07;9!UBERON:0010011;2.39e-07;9!UBERON:0000454;2.39e-07;9!UBERON:0001893;3.07e-07;34!UBERON:0003528;3.78e-07;34!UBERON:0002020;3.78e-07;34!UBERON:0001016;4.27e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.40e-20,56;UBERON:0005068,1.40e-20,56;UBERON:0006241,1.40e-20,56;UBERON:0007135,1.40e-20,56;UBERON:0000073,1.25e-18,53;UBERON:0002616,1.25e-18,53;UBERON:0002298,1.64e-18,6;UBERON:0001017,1.72e-15,81;UBERON:0000955,8.02e-14,68;UBERON:0006238,8.02e-14,68;UBERON:0001016,1.07e-13,89;UBERON:0003075,2.63e-13,82;UBERON:0007284,2.63e-13,82;UBERON:0002346,1.42e-12,86;UBERON:0002780,1.51e-11,41;UBERON:0001890,1.51e-11,41;UBERON:0003080,1.51e-11,41;UBERON:0006240,1.51e-11,41;UBERON:0003076,2.07e-11,15;UBERON:0003057,2.07e-11,15;UBERON:0007023,1.72e-10,114;UBERON:0000988,3.75e-10,3;UBERON:0001896,4.51e-10,3;UBERON:0005290,4.51e-10,3;UBERON:0010096,4.51e-10,3;UBERON:0010371,5.73e-10,104;UBERON:0004733,2.40e-09,12;UBERON:0002028,2.40e-09,12;UBERON:0007277,2.40e-09,12;UBERON:0004732,1.23e-08,13;UBERON:0003528,1.24e-08,34;UBERON:0002020,1.24e-08,34;UBERON:0010314,1.35e-08,132;UBERON:0001893,1.38e-08,34;UBERON:0002363,1.88e-08,1;UBERON:0007645,1.88e-08,1;UBERON:0007647,1.88e-08,1;UBERON:0010115,1.88e-08,1;UBERON:0002038,4.11e-08,1;UBERON:0009661,4.11e-08,1;UBERON:0002950,4.11e-08,1;UBERON:0001891,4.11e-08,1;UBERON:0009616,4.11e-08,1;UBERON:0010286,4.11e-08,1;UBERON:0002336,4.72e-08,1;UBERON:0011215,4.72e-08,1;UBERON:0001018,4.72e-08,1;UBERON:0002473,4.72e-08,1;UBERON:0005340,4.72e-08,1;UBERON:0003544,4.72e-08,1;UBERON:0005970,4.72e-08,1;UBERON:0002316,4.72e-08,1;UBERON:0001020,4.72e-08,1;UBERON:0002437,4.72e-08,1;UBERON:0001154,6.24e-08,1;UBERON:0001153,6.24e-08,1;UBERON:0001045,6.24e-08,1;UBERON:0002371,1.34e-07,76;UBERON:0000125,1.96e-07,9;UBERON:0002308,1.96e-07,9;UBERON:0003056,2.18e-07,61;UBERON:0002420,2.34e-07,9;UBERON:0007245,2.34e-07,9;UBERON:0010009,2.34e-07,9;UBERON:0010011,2.34e-07,9;UBERON:0000454,2.34e-07,9;UBERON:0002405,3.25e-07,93;UBERON:0001474,6.29e-07,82;UBERON:0002791,7.94e-07,32;UBERON:0002390,9.39e-07,98;UBERON:0003061,9.39e-07,98 | |||
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|short_description=p8@RB1 | |||
}} | }} |
Latest revision as of 15:27, 17 September 2015
Short description: | p8@RB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RB1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | -4bp_to_ENST00000484879_5end |
EntrezGene: | RB1 |
HGNC: | 9884 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.95e-23 | 5 |
adult endothelial progenitor cell | 3.78e-22 | 3 |
CD1a-positive Langerhans cell | 1.77e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.77e-15 | 2 |
conventional dendritic cell | 8.37e-13 | 8 |
macrophage | 1.41e-11 | 6 |
dendritic cell | 1.68e-10 | 10 |
macrophage dendritic cell progenitor | 7.57e-10 | 61 |
granulocyte monocyte progenitor cell | 7.92e-09 | 67 |
myeloid cell | 3.52e-07 | 108 |
common myeloid progenitor | 3.52e-07 | 108 |