FFCP PHASE1:Hg19::chr6:152793125..152793140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481502_5end | |association_with_transcript=0bp_to_ENST00000481502_5end | ||
|cluster_id=chr6:152793125..152793140,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_25_at_SYNE1_5end | |description=CAGE_peak_25_at_SYNE1_5end | ||
|id=chr6:152793125..152793140,- | |id=chr6:152793125..152793140,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.07e-12;82!UBERON:0006222;5.97e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;5.97e-09;1!DOID:4549;5.97e-09;1!DOID:5861;5.97e-09;1!DOID:6496;5.97e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.72e-09,1;DOID:4549,6.72e-09,1;DOID:5861,6.72e-09,1;DOID:6496,6.72e-09,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;5.09e-57;32!UBERON:0002791;3.52e-51;32!UBERON:0002780;1.27e-49;41!UBERON:0001890;1.27e-49;41!UBERON:0001893;1.59e-49;34!UBERON:0003528;7.61e-47;34!UBERON:0002020;7.61e-47;34!UBERON:0002619;3.18e-46;22!UBERON:0000956;1.17e-40;25!UBERON:0000203;1.17e-40;25!UBERON:0000349;3.80e-38;5!UBERON:0001950;3.73e-35;20!UBERON:0000073;4.23e-35;53!UBERON:0002616;4.23e-35;53!UBERON:0000200;3.96e-32;6!UBERON:0002420;1.71e-30;9!UBERON:0007245;1.71e-30;9!UBERON:0010009;1.71e-30;9!UBERON:0010011;1.71e-30;9!UBERON:0000454;1.71e-30;9!UBERON:0000955;3.45e-26;68!UBERON:0001870;1.34e-24;3!UBERON:0001017;1.01e-22;75!UBERON:0000369;2.05e-18;4!UBERON:0002435;2.05e-18;4!UBERON:0000204;2.05e-18;4!UBERON:0001016;3.71e-18;83!UBERON:0009663;3.91e-18;7!UBERON:0001871;1.36e-17;6!UBERON:0002702;5.30e-17;2!UBERON:0001954;1.37e-16;2!UBERON:0003022;1.37e-16;2!UBERON:0002421;1.37e-16;2!UBERON:0002600;1.37e-16;2!UBERON:0002771;3.48e-16;2!UBERON:0001876;3.48e-16;2!UBERON:0000007;3.48e-16;2!UBERON:0000125;3.75e-14;9!UBERON:0002308;3.75e-14;9!UBERON:0007023;5.10e-12;114!UBERON:0005383;9.51e-12;3!UBERON:0005382;9.51e-12;3!UBERON:0001894;2.37e-10;7!UBERON:0001874;2.30e-09;1!UBERON:0011216;3.22e-09;132!UBERON:0001882;5.97e-09;1!UBERON:0002022;5.97e-09;1!UBERON:0003112;5.97e-09;1!UBERON:0007195;5.97e-09;1!UBERON:0011158;5.97e-09;1!UBERON:0007190;5.97e-09;1!UBERON:0003128;5.97e-09;1!UBERON:0005403;5.97e-09;1!UBERON:0001703;5.97e-09;1!UBERON:0002241;5.97e-09;1!UBERON:0003296;1.51e-08;4!UBERON:0010133;1.51e-08;4 | |||
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|short_description=p25@SYNE1 | |short_description=p25@SYNE1 | ||
}} | }} |
Latest revision as of 06:48, 16 September 2015
Short description: | p25@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SYNE1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000481502_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.72e-09 | 1 |
extraosseous chondrosarcoma | 6.72e-09 | 1 |
myxoid chondrosarcoma | 6.72e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 6.72e-09 | 1 |