FFCP PHASE1:Hg19::chr6:72596142..72596154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-251bp_to_ENST00000370419,ENST00000491071_5end | |association_with_transcript=-251bp_to_ENST00000370419,ENST00000491071_5end | ||
|cluster_id=chr6:72596142..72596154,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_8_at_RIMS1_5end | |description=CAGE_peak_8_at_RIMS1_5end | ||
|id=chr6:72596142..72596154,+ | |id=chr6:72596142..72596154,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.79e-07;1!CL:0002372;1.79e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,2.17e-07,1;CL:0002372,2.17e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.32e-19;3!UBERON:0006222;1.79e-07;1!UBERON:0006601;6.35e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.43e-63!57;UBERON:0005068!1.43e-63!57;UBERON:0006241!1.43e-63!57;UBERON:0007135!1.43e-63!57;UBERON:0005743!2.13e-54!86;UBERON:0001017!4.24e-53!82;UBERON:0002616!1.68e-52!59;UBERON:0000073!4.91e-52!94;UBERON:0001016!4.91e-52!94;UBERON:0002780!1.70e-50!41;UBERON:0001890!1.70e-50!41;UBERON:0006240!1.70e-50!41;UBERON:0003075!8.49e-50!86;UBERON:0007284!8.49e-50!86;UBERON:0003080!4.55e-49!42;UBERON:0002020!5.11e-48!34;UBERON:0003528!5.11e-48!34;UBERON:0001893!5.80e-48!34;UBERON:0000955!2.59e-47!69;UBERON:0006238!2.59e-47!69;UBERON:0002346!6.11e-47!90;UBERON:0002791!7.29e-46!33;UBERON:0001869!6.84e-45!32;UBERON:0003056!6.83e-37!61;UBERON:0002619!1.58e-36!22;UBERON:0007023!7.14e-34!115;UBERON:0001950!2.62e-32!20;UBERON:0000956!1.46e-31!25;UBERON:0000203!1.46e-31!25;UBERON:0000033!1.11e-27!123;UBERON:0004121!7.68e-26!169;UBERON:0000153!9.14e-26!129;UBERON:0007811!9.14e-26!129;UBERON:0000924!6.87e-25!173;UBERON:0006601!6.87e-25!173;UBERON:0002308!3.46e-18!9;UBERON:0000125!3.46e-18!9;UBERON:0003076!4.77e-15!15;UBERON:0003057!4.77e-15!15;UBERON:0002420!1.00e-14!9;UBERON:0007245!1.00e-14!9;UBERON:0010009!1.00e-14!9;UBERON:0010011!1.00e-14!9;UBERON:0000454!1.00e-14!9;UBERON:0009663!1.24e-14!7;UBERON:0000200!5.24e-14!6;UBERON:0000025!1.67e-13!194;UBERON:0001872!1.79e-11!5;UBERON:0001871!1.54e-10!7;UBERON:0004733!1.69e-10!12;UBERON:0002028!1.69e-10!12;UBERON:0007277!1.69e-10!12;UBERON:0000064!2.07e-10!219;UBERON:0004732!1.44e-09!13;UBERON:0000369!1.74e-09!4;UBERON:0002435!1.74e-09!4;UBERON:0000204!1.74e-09!4;UBERON:0010082!1.74e-09!4;UBERON:0000475!3.61e-09!365;UBERON:0002298!9.90e-09!8;UBERON:0000483!1.21e-08!309;UBERON:0002680!1.49e-08!9;UBERON:0001895!1.49e-08!9;UBERON:0010092!1.49e-08!9;UBERON:0004111!1.78e-08!241;UBERON:0000119!1.99e-08!312;UBERON:0000349!4.02e-08!5;UBERON:0002771!7.64e-08!3;UBERON:0002021!9.10e-08!5;UBERON:0005383!2.18e-07!3;UBERON:0005382!2.18e-07!3;UBERON:0000477!3.24e-07!286;UBERON:0000988!4.79e-07!3;UBERON:0006331!9.08e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!1.43e-63!57;UBERON:0005068!1.43e-63!57;UBERON:0006241!1.43e-63!57;UBERON:0007135!1.43e-63!57;UBERON:0005743!2.13e-54!86;UBERON:0001017!4.24e-53!82;UBERON:0002616!1.68e-52!59;UBERON:0000073!4.91e-52!94;UBERON:0001016!4.91e-52!94;UBERON:0002780!1.70e-50!41;UBERON:0001890!1.70e-50!41;UBERON:0006240!1.70e-50!41;UBERON:0003075!8.49e-50!86;UBERON:0007284!8.49e-50!86;UBERON:0003080!4.55e-49!42;UBERON:0002020!5.11e-48!34;UBERON:0003528!5.11e-48!34;UBERON:0001893!5.80e-48!34;UBERON:0000955!2.59e-47!69;UBERON:0006238!2.59e-47!69;UBERON:0002346!6.11e-47!90;UBERON:0002791!7.29e-46!33;UBERON:0001869!6.84e-45!32;UBERON:0003056!6.83e-37!61;UBERON:0002619!1.58e-36!22;UBERON:0007023!7.14e-34!115;UBERON:0001950!2.62e-32!20;UBERON:0000956!1.46e-31!25;UBERON:0000203!1.46e-31!25;UBERON:0000033!1.11e-27!123;UBERON:0004121!7.68e-26!169;UBERON:0000153!9.14e-26!129;UBERON:0007811!9.14e-26!129;UBERON:0000924!6.87e-25!173;UBERON:0006601!6.87e-25!173;UBERON:0002308!3.46e-18!9;UBERON:0000125!3.46e-18!9;UBERON:0003076!4.77e-15!15;UBERON:0003057!4.77e-15!15;UBERON:0002420!1.00e-14!9;UBERON:0007245!1.00e-14!9;UBERON:0010009!1.00e-14!9;UBERON:0010011!1.00e-14!9;UBERON:0000454!1.00e-14!9;UBERON:0009663!1.24e-14!7;UBERON:0000200!5.24e-14!6;UBERON:0000025!1.67e-13!194;UBERON:0001872!1.79e-11!5;UBERON:0001871!1.54e-10!7;UBERON:0004733!1.69e-10!12;UBERON:0002028!1.69e-10!12;UBERON:0007277!1.69e-10!12;UBERON:0000064!2.07e-10!219;UBERON:0004732!1.44e-09!13;UBERON:0000369!1.74e-09!4;UBERON:0002435!1.74e-09!4;UBERON:0000204!1.74e-09!4;UBERON:0010082!1.74e-09!4;UBERON:0000475!3.61e-09!365;UBERON:0002298!9.90e-09!8;UBERON:0000483!1.21e-08!309;UBERON:0002680!1.49e-08!9;UBERON:0001895!1.49e-08!9;UBERON:0010092!1.49e-08!9;UBERON:0004111!1.78e-08!241;UBERON:0000119!1.99e-08!312;UBERON:0000349!4.02e-08!5;UBERON:0002771!7.64e-08!3;UBERON:0002021!9.10e-08!5;UBERON:0005383!2.18e-07!3;UBERON:0005382!2.18e-07!3;UBERON:0000477!3.24e-07!286;UBERON:0000988!4.79e-07!3;UBERON:0006331!9.08e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.50e-76;22!UBERON:0001869;1.17e-69;32!UBERON:0000956;1.04e-66;25!UBERON:0000203;1.04e-66;25!UBERON:0001950;1.40e-64;20!UBERON:0002791;1.16e-63;32!UBERON:0001893;1.05e-60;34!UBERON:0003528;1.45e-58;34!UBERON:0002020;1.45e-58;34!UBERON:0002780;2.74e-51;41!UBERON:0001890;2.74e-51;41!UBERON:0000073;2.44e-39;53!UBERON:0002616;2.44e-39;53!UBERON:0000200;1.38e-36;6!UBERON:0000955;1.41e-27;68!UBERON:0001017;6.79e-23;75!UBERON:0001871;1.11e-22;6!UBERON:0001016;5.27e-21;83!UBERON:0000349;1.52e-20;5!UBERON:0001870;2.27e-19;3!UBERON:0001954;8.91e-14;2!UBERON:0003022;8.91e-14;2!UBERON:0002421;8.91e-14;2!UBERON:0002600;8.91e-14;2!UBERON:0002771;2.88e-13;2!UBERON:0002702;2.88e-13;2!UBERON:0002021;3.78e-12;5!UBERON:0001872;7.57e-12;5!UBERON:0002420;2.84e-11;9!UBERON:0007245;2.84e-11;9!UBERON:0010009;2.84e-11;9!UBERON:0010011;2.84e-11;9!UBERON:0000454;2.84e-11;9!UBERON:0002037;4.53e-10;6!UBERON:0011216;1.68e-09;132!UBERON:0007023;2.59e-09;114!UBERON:0009663;1.88e-08;7!UBERON:0003112;5.39e-08;1!UBERON:0011158;5.39e-08;1!UBERON:0003128;5.39e-08;1!UBERON:0001703;5.39e-08;1!UBERON:0002241;5.39e-08;1!UBERON:0002022;7.75e-08;1!UBERON:0007190;7.75e-08;1!UBERON:0002581;1.79e-07;1!UBERON:0002902;1.79e-07;1!UBERON:0001882;1.79e-07;1!UBERON:0009899;1.79e-07;1!UBERON:0005403;1.79e-07;1!UBERON:0000369;4.61e-07;4!UBERON:0002435;4.61e-07;4!UBERON:0000204;4.61e-07;4!UBERON:0002680;7.34e-07;9!UBERON:0001895;7.34e-07;9 | |||
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|short_description=p8@RIMS1 | |short_description=p8@RIMS1 | ||
}} | }} |
Latest revision as of 16:21, 19 September 2015
Short description: | p8@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RIMS1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -251bp_to_ENST00000370419, ENST00000491071_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 2.17e-07 | 1 |
myotube | 2.17e-07 | 1 |